BLASTX nr result
ID: Panax25_contig00013538
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00013538
(448 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017241966.1 PREDICTED: pentatricopeptide repeat-containing pr... 74 2e-12
XP_015168027.1 PREDICTED: pentatricopeptide repeat-containing pr... 68 2e-10
XP_011079534.1 PREDICTED: pentatricopeptide repeat-containing pr... 66 1e-09
XP_019069880.1 PREDICTED: pentatricopeptide repeat-containing pr... 65 2e-09
CBI36966.3 unnamed protein product, partial [Vitis vinifera] 65 2e-09
XP_004240564.1 PREDICTED: pentatricopeptide repeat-containing pr... 65 2e-09
XP_002271180.1 PREDICTED: pentatricopeptide repeat-containing pr... 65 2e-09
CDP17054.1 unnamed protein product [Coffea canephora] 65 2e-09
EYU46823.1 hypothetical protein MIMGU_mgv1a001306mg [Erythranthe... 63 8e-09
XP_012834321.1 PREDICTED: pentatricopeptide repeat-containing pr... 63 8e-09
KVH94500.1 Pentatricopeptide repeat-containing protein [Cynara c... 63 1e-08
XP_015078966.1 PREDICTED: pentatricopeptide repeat-containing pr... 62 2e-08
NP_001324971.1 s uncoupled 1 [Arabidopsis thaliana] ANM62844.1 s... 61 4e-08
OAP08443.1 GUN1 [Arabidopsis thaliana] 61 4e-08
NP_180698.1 s uncoupled 1 [Arabidopsis thaliana] Q9SIC9.1 RecNam... 61 4e-08
XP_019235229.1 PREDICTED: pentatricopeptide repeat-containing pr... 61 5e-08
XP_019235219.1 PREDICTED: pentatricopeptide repeat-containing pr... 61 5e-08
XP_011041010.1 PREDICTED: pentatricopeptide repeat-containing pr... 61 5e-08
APR64054.1 hypothetical protein [Populus tomentosa] 60 1e-07
XP_002320970.2 hypothetical protein POPTR_0014s11380g [Populus t... 60 1e-07
>XP_017241966.1 PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Daucus carota subsp. sativus]
Length = 880
Score = 73.6 bits (179), Expect = 2e-12
Identities = 55/137 (40%), Positives = 62/137 (45%), Gaps = 14/137 (10%)
Frame = +3
Query: 75 STPPPHYTLTTANKPXXXXXXXXXXXXXXXTLXXXXXXXXXXN--------FTAPKVSLN 230
+TPPP YTLTTA KP F AP+VS+N
Sbjct: 2 ATPPPPYTLTTA-KPYQNHRNLHPHQHQPPNNHHPHHQNPIFTTPNHQNPIFIAPRVSIN 60
Query: 231 HHK-----PRNAANP-PSRIPKTTXXXXXXXXXXXXXXXXXKSEFSASDFSGRRSTRYVS 392
HH+ PRN + P P I S +ASDFSGRRSTRYVS
Sbjct: 61 HHQRFQAHPRNVSAPAPPHIQNPPRPNFPSFGSAKSP-----SGLAASDFSGRRSTRYVS 115
Query: 393 KIHFGRQKTTAASRHTS 443
K+HFGRQKT ASRHTS
Sbjct: 116 KMHFGRQKTANASRHTS 132
>XP_015168027.1 PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Solanum tuberosum]
Length = 850
Score = 68.2 bits (165), Expect = 2e-10
Identities = 52/127 (40%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Frame = +3
Query: 66 MASSTPPPHYTLTTANKPXXXXXXXXXXXXXXXTLXXXXXXXXXXNFTAPKVSLNHHKP- 242
MASSTPPPH LTT+ KP ++++ KVSLN P
Sbjct: 1 MASSTPPPHCALTTS-KPYHPHPLTQTHSHPHPN----HRNNHQRHWSSQKVSLNRPAPP 55
Query: 243 RNAANPPSRIPKTTXXXXXXXXXXXXXXXXXKSEFSASDFSGRRSTRYVSKIHFGRQKTT 422
RNA +PP P T KS+FSA DFSGRRSTR+VSK+HFGR K +
Sbjct: 56 RNATHPP---PSQTPNFLSLSSS--------KSDFSA-DFSGRRSTRFVSKMHFGRAKIS 103
Query: 423 AASRHTS 443
RH+S
Sbjct: 104 GNGRHSS 110
>XP_011079534.1 PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Sesamum indicum]
Length = 856
Score = 65.9 bits (159), Expect = 1e-09
Identities = 48/126 (38%), Positives = 61/126 (48%)
Frame = +3
Query: 66 MASSTPPPHYTLTTANKPXXXXXXXXXXXXXXXTLXXXXXXXXXXNFTAPKVSLNHHKPR 245
MASSTPPPH TLTT KP N+T K SL +H
Sbjct: 1 MASSTPPPHCTLTTT-KPSHNHHFHHLQNHQRHQ---RSSSHQHHNWTPQKFSLINHAS- 55
Query: 246 NAANPPSRIPKTTXXXXXXXXXXXXXXXXXKSEFSASDFSGRRSTRYVSKIHFGRQKTTA 425
+AA+P P T SA+DF+GRRSTR+VSK+HFGR ++TA
Sbjct: 56 HAASPRPPPPSATAAAAVGSPNFPC--------LSAADFTGRRSTRFVSKMHFGRPRSTA 107
Query: 426 ASRHTS 443
+SRH++
Sbjct: 108 SSRHSA 113
>XP_019069880.1 PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic isoform X2 [Solanum lycopersicum]
Length = 715
Score = 65.1 bits (157), Expect = 2e-09
Identities = 51/126 (40%), Positives = 62/126 (49%)
Frame = +3
Query: 66 MASSTPPPHYTLTTANKPXXXXXXXXXXXXXXXTLXXXXXXXXXXNFTAPKVSLNHHKPR 245
MASSTPPPH LTT+ KP ++++ KVSLN PR
Sbjct: 1 MASSTPPPHCALTTS-KPYQPQTHSHPHPNHRNN--------HQRHWSSQKVSLN--PPR 49
Query: 246 NAANPPSRIPKTTXXXXXXXXXXXXXXXXXKSEFSASDFSGRRSTRYVSKIHFGRQKTTA 425
N N PS+ P KS+FSA DFSGRRSTR+VSK+HFGR K +
Sbjct: 50 NP-NHPSQTPN------------FLSLSSSKSDFSA-DFSGRRSTRFVSKMHFGRAKISG 95
Query: 426 ASRHTS 443
RH+S
Sbjct: 96 NGRHSS 101
>CBI36966.3 unnamed protein product, partial [Vitis vinifera]
Length = 730
Score = 65.1 bits (157), Expect = 2e-09
Identities = 41/84 (48%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Frame = +3
Query: 201 NFTAPKVSLNHH--KPRNAANPPSRIPKTTXXXXXXXXXXXXXXXXXKSEFSASDFSGRR 374
++++ KVSL + PRNAA P + P T KSE +A DFSGRR
Sbjct: 35 HWSSHKVSLTNPLPSPRNAAKPGAASPATATNRNSNFPSLSPLPPS-KSELTA-DFSGRR 92
Query: 375 STRYVSKIHFGRQKTTAASRHTST 446
STR+VSK+HFGR KT AA+RHTST
Sbjct: 93 STRFVSKMHFGRPKTAAAARHTST 116
>XP_004240564.1 PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic isoform X1 [Solanum lycopersicum]
Length = 841
Score = 65.1 bits (157), Expect = 2e-09
Identities = 51/126 (40%), Positives = 62/126 (49%)
Frame = +3
Query: 66 MASSTPPPHYTLTTANKPXXXXXXXXXXXXXXXTLXXXXXXXXXXNFTAPKVSLNHHKPR 245
MASSTPPPH LTT+ KP ++++ KVSLN PR
Sbjct: 1 MASSTPPPHCALTTS-KPYQPQTHSHPHPNHRNN--------HQRHWSSQKVSLN--PPR 49
Query: 246 NAANPPSRIPKTTXXXXXXXXXXXXXXXXXKSEFSASDFSGRRSTRYVSKIHFGRQKTTA 425
N N PS+ P KS+FSA DFSGRRSTR+VSK+HFGR K +
Sbjct: 50 NP-NHPSQTPN------------FLSLSSSKSDFSA-DFSGRRSTRFVSKMHFGRAKISG 95
Query: 426 ASRHTS 443
RH+S
Sbjct: 96 NGRHSS 101
>XP_002271180.1 PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 65.1 bits (157), Expect = 2e-09
Identities = 41/84 (48%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Frame = +3
Query: 201 NFTAPKVSLNHH--KPRNAANPPSRIPKTTXXXXXXXXXXXXXXXXXKSEFSASDFSGRR 374
++++ KVSL + PRNAA P + P T KSE +A DFSGRR
Sbjct: 35 HWSSHKVSLTNPLPSPRNAAKPGAASPATATNRNSNFPSLSPLPPS-KSELTA-DFSGRR 92
Query: 375 STRYVSKIHFGRQKTTAASRHTST 446
STR+VSK+HFGR KT AA+RHTST
Sbjct: 93 STRFVSKMHFGRPKTAAAARHTST 116
>CDP17054.1 unnamed protein product [Coffea canephora]
Length = 866
Score = 64.7 bits (156), Expect = 2e-09
Identities = 44/127 (34%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Frame = +3
Query: 66 MASSTPPPHYTLTTANKPXXXXXXXXXXXXXXXTLXXXXXXXXXXNFTAPKVSLNHHKPR 245
MASSTPPPH LTT+ KP + PKVSLNHH+
Sbjct: 1 MASSTPPPHCALTTS-KPYQSHHPHPHPHSPHP-------HRHHHHHHHPKVSLNHHRAS 52
Query: 246 NAANPPSRIPKTTXXXXXXXXXXXXXXXXXKSEFSASDFSGRRSTRYVSKIHFGRQKT-T 422
P + + + ++DFSGRRSTR+VSK+HFGR K+ +
Sbjct: 53 QPLPHPPAVARPPPPAALSTTNPPSFPHLSSNSELSADFSGRRSTRFVSKMHFGRPKSAS 112
Query: 423 AASRHTS 443
++SRH+S
Sbjct: 113 SSSRHSS 119
>EYU46823.1 hypothetical protein MIMGU_mgv1a001306mg [Erythranthe guttata]
Length = 843
Score = 63.2 bits (152), Expect = 8e-09
Identities = 49/129 (37%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Frame = +3
Query: 66 MASSTPPPHYTLTTANKPXXXXXXXXXXXXXXXTLXXXXXXXXXXNFTAPKVSLNHHKPR 245
MASSTPPPH +LT A KP N+T KVSLN H
Sbjct: 1 MASSTPPPHCSLT-ATKPYQNHHFHHLQNHRHHQ---GSSSRQNHNWTPQKVSLNTHVSH 56
Query: 246 NAAN---PPSRIPKTTXXXXXXXXXXXXXXXXXKSEFSASDFSGRRSTRYVSKIHFGRQK 416
AA PPS S SA+DFSGRRSTR+VSK+HFGR +
Sbjct: 57 AAAPRPPPPSAAAAAAVVSPNY------------SCLSAADFSGRRSTRFVSKMHFGRPR 104
Query: 417 TTAASRHTS 443
+TA+ R ++
Sbjct: 105 STASGRRSA 113
>XP_012834321.1 PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Erythranthe guttata]
Length = 863
Score = 63.2 bits (152), Expect = 8e-09
Identities = 49/129 (37%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Frame = +3
Query: 66 MASSTPPPHYTLTTANKPXXXXXXXXXXXXXXXTLXXXXXXXXXXNFTAPKVSLNHHKPR 245
MASSTPPPH +LT A KP N+T KVSLN H
Sbjct: 1 MASSTPPPHCSLT-ATKPYQNHHFHHLQNHRHHQ---GSSSRQNHNWTPQKVSLNTHVSH 56
Query: 246 NAAN---PPSRIPKTTXXXXXXXXXXXXXXXXXKSEFSASDFSGRRSTRYVSKIHFGRQK 416
AA PPS S SA+DFSGRRSTR+VSK+HFGR +
Sbjct: 57 AAAPRPPPPSAAAAAAVVSPNY------------SCLSAADFSGRRSTRFVSKMHFGRPR 104
Query: 417 TTAASRHTS 443
+TA+ R ++
Sbjct: 105 STASGRRSA 113
>KVH94500.1 Pentatricopeptide repeat-containing protein [Cynara cardunculus
var. scolymus]
Length = 800
Score = 62.8 bits (151), Expect = 1e-08
Identities = 50/129 (38%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
Frame = +3
Query: 66 MASSTPPPHYTLTTANKPXXXXXXXXXXXXXXXTLXXXXXXXXXXNFTAPKVSLNHHKPR 245
MASSTPPP TLTT+ KP T + +PKVSL+ PR
Sbjct: 1 MASSTPPP--TLTTS-KPYQNHHIQGIQNHHRRT-----HNGHNPHHPSPKVSLHPPTPR 52
Query: 246 NAANPPSRIPKTTXXXXXXXXXXXXXXXXX----KSEFSASDFSGRRSTRYVSKIHFGRQ 413
N +P T KSE +A DFSGRRSTR+VSK+HFGR
Sbjct: 53 NPTANKPPVPTTAAPAASSSLHHRNPNFAPLSASKSELAA-DFSGRRSTRFVSKMHFGRP 111
Query: 414 KTTAASRHT 440
K A+SRH+
Sbjct: 112 KAAASSRHS 120
>XP_015078966.1 PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Solanum pennellii]
Length = 841
Score = 62.4 bits (150), Expect = 2e-08
Identities = 48/126 (38%), Positives = 59/126 (46%)
Frame = +3
Query: 66 MASSTPPPHYTLTTANKPXXXXXXXXXXXXXXXTLXXXXXXXXXXNFTAPKVSLNHHKPR 245
MASSTPPPH LTT+ KP ++++ KVSLN PR
Sbjct: 1 MASSTPPPHCALTTS-KPYQPQTHSHPHPNHRNN--------HQRHWSSQKVSLN--PPR 49
Query: 246 NAANPPSRIPKTTXXXXXXXXXXXXXXXXXKSEFSASDFSGRRSTRYVSKIHFGRQKTTA 425
N +P KS+FSA DFSGRRSTR+VSK+HFGR K +
Sbjct: 50 NPTHPSQT-------------SNFLSLSSSKSDFSA-DFSGRRSTRFVSKMHFGRAKISG 95
Query: 426 ASRHTS 443
RH+S
Sbjct: 96 NGRHSS 101
>NP_001324971.1 s uncoupled 1 [Arabidopsis thaliana] ANM62844.1 s uncoupled 1
[Arabidopsis thaliana]
Length = 839
Score = 61.2 bits (147), Expect = 4e-08
Identities = 35/68 (51%), Positives = 42/68 (61%)
Frame = +3
Query: 240 PRNAANPPSRIPKTTXXXXXXXXXXXXXXXXXKSEFSASDFSGRRSTRYVSKIHFGRQKT 419
PR +A PPS + T KS+ S SDFSGRRSTR+VSK+HFGRQKT
Sbjct: 98 PRGSAPPPSSVA-TVAPAQLSQPPNFSPLQTPKSDLS-SDFSGRRSTRFVSKMHFGRQKT 155
Query: 420 TAASRHTS 443
T A+RH+S
Sbjct: 156 TMATRHSS 163
>OAP08443.1 GUN1 [Arabidopsis thaliana]
Length = 918
Score = 61.2 bits (147), Expect = 4e-08
Identities = 35/68 (51%), Positives = 42/68 (61%)
Frame = +3
Query: 240 PRNAANPPSRIPKTTXXXXXXXXXXXXXXXXXKSEFSASDFSGRRSTRYVSKIHFGRQKT 419
PR +A PPS + T KS+ S SDFSGRRSTR+VSK+HFGRQKT
Sbjct: 98 PRGSAPPPSSVA-TVAPAQLSQPPNFSPLQTPKSDLS-SDFSGRRSTRFVSKMHFGRQKT 155
Query: 420 TAASRHTS 443
T A+RH+S
Sbjct: 156 TMATRHSS 163
>NP_180698.1 s uncoupled 1 [Arabidopsis thaliana] Q9SIC9.1 RecName:
Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor AAD26479.1
unknown protein [Arabidopsis thaliana] AEC08542.1 s
uncoupled 1 [Arabidopsis thaliana]
Length = 918
Score = 61.2 bits (147), Expect = 4e-08
Identities = 35/68 (51%), Positives = 42/68 (61%)
Frame = +3
Query: 240 PRNAANPPSRIPKTTXXXXXXXXXXXXXXXXXKSEFSASDFSGRRSTRYVSKIHFGRQKT 419
PR +A PPS + T KS+ S SDFSGRRSTR+VSK+HFGRQKT
Sbjct: 98 PRGSAPPPSSVA-TVAPAQLSQPPNFSPLQTPKSDLS-SDFSGRRSTRFVSKMHFGRQKT 155
Query: 420 TAASRHTS 443
T A+RH+S
Sbjct: 156 TMATRHSS 163
>XP_019235229.1 PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic isoform X2 [Nicotiana attenuata]
Length = 712
Score = 60.8 bits (146), Expect = 5e-08
Identities = 47/131 (35%), Positives = 57/131 (43%), Gaps = 5/131 (3%)
Frame = +3
Query: 66 MASSTPPPHYTLTTANKPXXXXXXXXXXXXXXXTLXXXXXXXXXXNFTAPKVSLNHHKPR 245
MASSTPPPH LTT+ KP N P HH PR
Sbjct: 1 MASSTPPPHCALTTS-KPYQNHPLPQQ------------------NHPHPHP---HHHPR 38
Query: 246 N-----AANPPSRIPKTTXXXXXXXXXXXXXXXXXKSEFSASDFSGRRSTRYVSKIHFGR 410
N + N P+ T +S+FSA DFSGRRSTR+VSK+HF R
Sbjct: 39 NHPHKVSLNRPTHPRHATTHPPPSQNPSFLSLSSSRSDFSA-DFSGRRSTRFVSKMHFNR 97
Query: 411 QKTTAASRHTS 443
+ + SRH+S
Sbjct: 98 SRVSGTSRHSS 108
>XP_019235219.1 PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic isoform X1 [Nicotiana attenuata]
OIT06997.1 pentatricopeptide repeat-containing protein,
chloroplastic [Nicotiana attenuata]
Length = 845
Score = 60.8 bits (146), Expect = 5e-08
Identities = 47/131 (35%), Positives = 57/131 (43%), Gaps = 5/131 (3%)
Frame = +3
Query: 66 MASSTPPPHYTLTTANKPXXXXXXXXXXXXXXXTLXXXXXXXXXXNFTAPKVSLNHHKPR 245
MASSTPPPH LTT+ KP N P HH PR
Sbjct: 1 MASSTPPPHCALTTS-KPYQNHPLPQQ------------------NHPHPHP---HHHPR 38
Query: 246 N-----AANPPSRIPKTTXXXXXXXXXXXXXXXXXKSEFSASDFSGRRSTRYVSKIHFGR 410
N + N P+ T +S+FSA DFSGRRSTR+VSK+HF R
Sbjct: 39 NHPHKVSLNRPTHPRHATTHPPPSQNPSFLSLSSSRSDFSA-DFSGRRSTRFVSKMHFNR 97
Query: 411 QKTTAASRHTS 443
+ + SRH+S
Sbjct: 98 SRVSGTSRHSS 108
>XP_011041010.1 PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Populus euphratica]
Length = 876
Score = 60.8 bits (146), Expect = 5e-08
Identities = 34/67 (50%), Positives = 39/67 (58%)
Frame = +3
Query: 243 RNAANPPSRIPKTTXXXXXXXXXXXXXXXXXKSEFSASDFSGRRSTRYVSKIHFGRQKTT 422
RNA PP+ TT KSE ASDFSGRRSTR+VSK++FGR +TT
Sbjct: 60 RNAPKPPATTTTTTTTHHPQIHPTFPSLQSPKSEL-ASDFSGRRSTRFVSKLNFGRPRTT 118
Query: 423 AASRHTS 443
SRHTS
Sbjct: 119 MGSRHTS 125
>APR64054.1 hypothetical protein [Populus tomentosa]
Length = 875
Score = 59.7 bits (143), Expect = 1e-07
Identities = 33/67 (49%), Positives = 39/67 (58%)
Frame = +3
Query: 243 RNAANPPSRIPKTTXXXXXXXXXXXXXXXXXKSEFSASDFSGRRSTRYVSKIHFGRQKTT 422
RNA PP+ TT KSE ASDFSGRRSTR+VSK++FGR +TT
Sbjct: 60 RNAPKPPATTTTTTTTHHPQIHPTFPSLQSPKSEL-ASDFSGRRSTRFVSKLNFGRPRTT 118
Query: 423 AASRHTS 443
+RHTS
Sbjct: 119 MGTRHTS 125
>XP_002320970.2 hypothetical protein POPTR_0014s11380g [Populus trichocarpa]
EEE99285.2 hypothetical protein POPTR_0014s11380g
[Populus trichocarpa]
Length = 875
Score = 59.7 bits (143), Expect = 1e-07
Identities = 33/67 (49%), Positives = 39/67 (58%)
Frame = +3
Query: 243 RNAANPPSRIPKTTXXXXXXXXXXXXXXXXXKSEFSASDFSGRRSTRYVSKIHFGRQKTT 422
RNA PP+ TT KSE ASDFSGRRSTR+VSK++FGR +TT
Sbjct: 60 RNAPKPPATTTTTTTTHHPQIHPTFPSLQSPKSEL-ASDFSGRRSTRFVSKLNFGRPRTT 118
Query: 423 AASRHTS 443
+RHTS
Sbjct: 119 MGTRHTS 125