BLASTX nr result
ID: Panax25_contig00013537
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00013537
(448 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017241966.1 PREDICTED: pentatricopeptide repeat-containing pr... 89 6e-18
CBI36966.3 unnamed protein product, partial [Vitis vinifera] 86 1e-16
XP_002271180.1 PREDICTED: pentatricopeptide repeat-containing pr... 86 1e-16
XP_011041010.1 PREDICTED: pentatricopeptide repeat-containing pr... 75 8e-13
XP_015168027.1 PREDICTED: pentatricopeptide repeat-containing pr... 74 1e-12
KVH94500.1 Pentatricopeptide repeat-containing protein [Cynara c... 74 1e-12
CDP17054.1 unnamed protein product [Coffea canephora] 74 1e-12
APR64054.1 hypothetical protein [Populus tomentosa] 74 2e-12
XP_002320970.2 hypothetical protein POPTR_0014s11380g [Populus t... 74 2e-12
KDO86953.1 hypothetical protein CISIN_1g002814mg [Citrus sinensis] 72 9e-12
XP_006444532.1 hypothetical protein CICLE_v10018807mg [Citrus cl... 72 9e-12
XP_006492356.1 PREDICTED: pentatricopeptide repeat-containing pr... 72 9e-12
XP_006444533.1 hypothetical protein CICLE_v10018807mg [Citrus cl... 72 9e-12
XP_011079534.1 PREDICTED: pentatricopeptide repeat-containing pr... 70 2e-11
XP_019235229.1 PREDICTED: pentatricopeptide repeat-containing pr... 70 4e-11
XP_019235219.1 PREDICTED: pentatricopeptide repeat-containing pr... 70 4e-11
XP_010087216.1 hypothetical protein L484_009725 [Morus notabilis... 69 8e-11
XP_010418730.1 PREDICTED: pentatricopeptide repeat-containing pr... 69 1e-10
NP_001324971.1 s uncoupled 1 [Arabidopsis thaliana] ANM62844.1 s... 68 2e-10
OAP08443.1 GUN1 [Arabidopsis thaliana] 68 2e-10
>XP_017241966.1 PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Daucus carota subsp. sativus]
Length = 880
Score = 89.4 bits (220), Expect = 6e-18
Identities = 59/135 (43%), Positives = 69/135 (51%), Gaps = 12/135 (8%)
Frame = +3
Query: 75 STPPPHYTLTTA-------NKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTAPKVSLSH 233
+TPPP YTLTTA N F AP+VS++H
Sbjct: 2 ATPPPPYTLTTAKPYQNHRNLHPHQHQPPNNHHPHHQNPIFTTPNHQNPIFIAPRVSINH 61
Query: 234 HK-----PRNAANPPSRIPKTTLPGNPSFHSFSPSLPRSKSEFSASDFSGRRSTRYVSKM 398
H+ PRN + P P P P+F SF + +S S +ASDFSGRRSTRYVSKM
Sbjct: 62 HQRFQAHPRNVSAPAP--PHIQNPPRPNFPSFGSA--KSPSGLAASDFSGRRSTRYVSKM 117
Query: 399 HFGRQKTTAASRHTS 443
HFGRQKT ASRHTS
Sbjct: 118 HFGRQKTANASRHTS 132
>CBI36966.3 unnamed protein product, partial [Vitis vinifera]
Length = 730
Score = 85.5 bits (210), Expect = 1e-16
Identities = 50/83 (60%), Positives = 60/83 (72%), Gaps = 2/83 (2%)
Frame = +3
Query: 204 FTAPKVSLSHH--KPRNAANPPSRIPKTTLPGNPSFHSFSPSLPRSKSEFSASDFSGRRS 377
+++ KVSL++ PRNAA P + P T N +F S SP LP SKSE +A DFSGRRS
Sbjct: 36 WSSHKVSLTNPLPSPRNAAKPGAASPATATNRNSNFPSLSP-LPPSKSELTA-DFSGRRS 93
Query: 378 TRYVSKMHFGRQKTTAASRHTST 446
TR+VSKMHFGR KT AA+RHTST
Sbjct: 94 TRFVSKMHFGRPKTAAAARHTST 116
>XP_002271180.1 PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 85.5 bits (210), Expect = 1e-16
Identities = 50/83 (60%), Positives = 60/83 (72%), Gaps = 2/83 (2%)
Frame = +3
Query: 204 FTAPKVSLSHH--KPRNAANPPSRIPKTTLPGNPSFHSFSPSLPRSKSEFSASDFSGRRS 377
+++ KVSL++ PRNAA P + P T N +F S SP LP SKSE +A DFSGRRS
Sbjct: 36 WSSHKVSLTNPLPSPRNAAKPGAASPATATNRNSNFPSLSP-LPPSKSELTA-DFSGRRS 93
Query: 378 TRYVSKMHFGRQKTTAASRHTST 446
TR+VSKMHFGR KT AA+RHTST
Sbjct: 94 TRFVSKMHFGRPKTAAAARHTST 116
>XP_011041010.1 PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Populus euphratica]
Length = 876
Score = 74.7 bits (182), Expect = 8e-13
Identities = 39/67 (58%), Positives = 45/67 (67%)
Frame = +3
Query: 243 RNAANPPSRIPKTTLPGNPSFHSFSPSLPRSKSEFSASDFSGRRSTRYVSKMHFGRQKTT 422
RNA PP+ TT +P H PSL KSE ASDFSGRRSTR+VSK++FGR +TT
Sbjct: 60 RNAPKPPATTTTTTTTHHPQIHPTFPSLQSPKSEL-ASDFSGRRSTRFVSKLNFGRPRTT 118
Query: 423 AASRHTS 443
SRHTS
Sbjct: 119 MGSRHTS 125
>XP_015168027.1 PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Solanum tuberosum]
Length = 850
Score = 74.3 bits (181), Expect = 1e-12
Identities = 57/127 (44%), Positives = 68/127 (53%), Gaps = 1/127 (0%)
Frame = +3
Query: 66 MASSTPPPHYTLTTANKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTAPKVSLSHHKP- 242
MASSTPPPH LTT+ KP +++ KVSL+ P
Sbjct: 1 MASSTPPPHCALTTS-KPYHPHPLTQTHSHPHPNHRNNHQRH----WSSQKVSLNRPAPP 55
Query: 243 RNAANPPSRIPKTTLPGNPSFHSFSPSLPRSKSEFSASDFSGRRSTRYVSKMHFGRQKTT 422
RNA +PP P T P+F S S S KS+FSA DFSGRRSTR+VSKMHFGR K +
Sbjct: 56 RNATHPP---PSQT----PNFLSLSSS----KSDFSA-DFSGRRSTRFVSKMHFGRAKIS 103
Query: 423 AASRHTS 443
RH+S
Sbjct: 104 GNGRHSS 110
>KVH94500.1 Pentatricopeptide repeat-containing protein [Cynara cardunculus
var. scolymus]
Length = 800
Score = 73.9 bits (180), Expect = 1e-12
Identities = 56/129 (43%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Frame = +3
Query: 66 MASSTPPPHYTLTTANKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTAPKVSLSHHKPR 245
MASSTPPP TLTT+ KP +PKVSL PR
Sbjct: 1 MASSTPPP--TLTTS-KPYQNHHIQGIQNHHRRTHNGHNPHHP-----SPKVSLHPPTPR 52
Query: 246 NAANPPSRIPKTTLPG-NPSFHSFSPS---LPRSKSEFSASDFSGRRSTRYVSKMHFGRQ 413
N +P T P + S H +P+ L SKSE +A DFSGRRSTR+VSKMHFGR
Sbjct: 53 NPTANKPPVPTTAAPAASSSLHHRNPNFAPLSASKSELAA-DFSGRRSTRFVSKMHFGRP 111
Query: 414 KTTAASRHT 440
K A+SRH+
Sbjct: 112 KAAASSRHS 120
>CDP17054.1 unnamed protein product [Coffea canephora]
Length = 866
Score = 73.9 bits (180), Expect = 1e-12
Identities = 57/131 (43%), Positives = 69/131 (52%), Gaps = 5/131 (3%)
Frame = +3
Query: 66 MASSTPPPHYTLTTANKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTAPKVSLSHHKPR 245
MASSTPPPH LTT+ KP PKVSL+HH+
Sbjct: 1 MASSTPPPHCALTTS-KPYQSHHPHPHPHSPHPHRHHHHHHH-------PKVSLNHHR-- 50
Query: 246 NAANPPSRIPKTTLPGNPSFHSFS--PSLPR--SKSEFSASDFSGRRSTRYVSKMHFGRQ 413
A+ P P P P+ S + PS P S SE SA DFSGRRSTR+VSKMHFGR
Sbjct: 51 -ASQPLPHPPAVARPPPPAALSTTNPPSFPHLSSNSELSA-DFSGRRSTRFVSKMHFGRP 108
Query: 414 KT-TAASRHTS 443
K+ +++SRH+S
Sbjct: 109 KSASSSSRHSS 119
>APR64054.1 hypothetical protein [Populus tomentosa]
Length = 875
Score = 73.6 bits (179), Expect = 2e-12
Identities = 38/67 (56%), Positives = 45/67 (67%)
Frame = +3
Query: 243 RNAANPPSRIPKTTLPGNPSFHSFSPSLPRSKSEFSASDFSGRRSTRYVSKMHFGRQKTT 422
RNA PP+ TT +P H PSL KSE ASDFSGRRSTR+VSK++FGR +TT
Sbjct: 60 RNAPKPPATTTTTTTTHHPQIHPTFPSLQSPKSEL-ASDFSGRRSTRFVSKLNFGRPRTT 118
Query: 423 AASRHTS 443
+RHTS
Sbjct: 119 MGTRHTS 125
>XP_002320970.2 hypothetical protein POPTR_0014s11380g [Populus trichocarpa]
EEE99285.2 hypothetical protein POPTR_0014s11380g
[Populus trichocarpa]
Length = 875
Score = 73.6 bits (179), Expect = 2e-12
Identities = 38/67 (56%), Positives = 45/67 (67%)
Frame = +3
Query: 243 RNAANPPSRIPKTTLPGNPSFHSFSPSLPRSKSEFSASDFSGRRSTRYVSKMHFGRQKTT 422
RNA PP+ TT +P H PSL KSE ASDFSGRRSTR+VSK++FGR +TT
Sbjct: 60 RNAPKPPATTTTTTTTHHPQIHPTFPSLQSPKSEL-ASDFSGRRSTRFVSKLNFGRPRTT 118
Query: 423 AASRHTS 443
+RHTS
Sbjct: 119 MGTRHTS 125
>KDO86953.1 hypothetical protein CISIN_1g002814mg [Citrus sinensis]
Length = 820
Score = 71.6 bits (174), Expect = 9e-12
Identities = 46/84 (54%), Positives = 55/84 (65%), Gaps = 5/84 (5%)
Frame = +3
Query: 204 FTAPKVSLSHH----KPRNAANPPSRIPKTTLPGNPS-FHSFSPSLPRSKSEFSASDFSG 368
+T+ KVSL+ PRNA P + TT+ NP FHS SP LP SKSE A DFSG
Sbjct: 43 WTSHKVSLTKPPLSPSPRNAPKPAAT--STTVAPNPKPFHSLSP-LPSSKSEL-APDFSG 98
Query: 369 RRSTRYVSKMHFGRQKTTAASRHT 440
RRSTR+VSKMHFGR K ++RH+
Sbjct: 99 RRSTRFVSKMHFGRPKIAMSTRHS 122
>XP_006444532.1 hypothetical protein CICLE_v10018807mg [Citrus clementina]
ESR57772.1 hypothetical protein CICLE_v10018807mg
[Citrus clementina]
Length = 820
Score = 71.6 bits (174), Expect = 9e-12
Identities = 46/84 (54%), Positives = 55/84 (65%), Gaps = 5/84 (5%)
Frame = +3
Query: 204 FTAPKVSLSHH----KPRNAANPPSRIPKTTLPGNPS-FHSFSPSLPRSKSEFSASDFSG 368
+T+ KVSL+ PRNA P + TT+ NP FHS SP LP SKSE A DFSG
Sbjct: 43 WTSHKVSLTKPPLSPSPRNAPKPAAT--STTVAPNPKPFHSLSP-LPSSKSEL-APDFSG 98
Query: 369 RRSTRYVSKMHFGRQKTTAASRHT 440
RRSTR+VSKMHFGR K ++RH+
Sbjct: 99 RRSTRFVSKMHFGRPKIAMSTRHS 122
>XP_006492356.1 PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Citrus sinensis] KDO86952.1 hypothetical
protein CISIN_1g002814mg [Citrus sinensis]
Length = 877
Score = 71.6 bits (174), Expect = 9e-12
Identities = 46/84 (54%), Positives = 55/84 (65%), Gaps = 5/84 (5%)
Frame = +3
Query: 204 FTAPKVSLSHH----KPRNAANPPSRIPKTTLPGNPS-FHSFSPSLPRSKSEFSASDFSG 368
+T+ KVSL+ PRNA P + TT+ NP FHS SP LP SKSE A DFSG
Sbjct: 43 WTSHKVSLTKPPLSPSPRNAPKPAAT--STTVAPNPKPFHSLSP-LPSSKSEL-APDFSG 98
Query: 369 RRSTRYVSKMHFGRQKTTAASRHT 440
RRSTR+VSKMHFGR K ++RH+
Sbjct: 99 RRSTRFVSKMHFGRPKIAMSTRHS 122
>XP_006444533.1 hypothetical protein CICLE_v10018807mg [Citrus clementina]
ESR57773.1 hypothetical protein CICLE_v10018807mg
[Citrus clementina]
Length = 877
Score = 71.6 bits (174), Expect = 9e-12
Identities = 46/84 (54%), Positives = 55/84 (65%), Gaps = 5/84 (5%)
Frame = +3
Query: 204 FTAPKVSLSHH----KPRNAANPPSRIPKTTLPGNPS-FHSFSPSLPRSKSEFSASDFSG 368
+T+ KVSL+ PRNA P + TT+ NP FHS SP LP SKSE A DFSG
Sbjct: 43 WTSHKVSLTKPPLSPSPRNAPKPAAT--STTVAPNPKPFHSLSP-LPSSKSEL-APDFSG 98
Query: 369 RRSTRYVSKMHFGRQKTTAASRHT 440
RRSTR+VSKMHFGR K ++RH+
Sbjct: 99 RRSTRFVSKMHFGRPKIAMSTRHS 122
>XP_011079534.1 PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Sesamum indicum]
Length = 856
Score = 70.5 bits (171), Expect = 2e-11
Identities = 51/128 (39%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Frame = +3
Query: 66 MASSTPPPHYTLTTANKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTAPKVSLSHHKPR 245
MASSTPPPH TLTT KP +T K SL +H
Sbjct: 1 MASSTPPPHCTLTT-TKP---SHNHHFHHLQNHQRHQRSSSHQHHNWTPQKFSLINHASH 56
Query: 246 NAA--NPPSRIPKTTLPGNPSFHSFSPSLPRSKSEFSASDFSGRRSTRYVSKMHFGRQKT 419
A+ PP G+P+F P L SA+DF+GRRSTR+VSKMHFGR ++
Sbjct: 57 AASPRPPPPSATAAAAVGSPNF----PCL-------SAADFTGRRSTRFVSKMHFGRPRS 105
Query: 420 TAASRHTS 443
TA+SRH++
Sbjct: 106 TASSRHSA 113
>XP_019235229.1 PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic isoform X2 [Nicotiana attenuata]
Length = 712
Score = 69.7 bits (169), Expect = 4e-11
Identities = 51/131 (38%), Positives = 61/131 (46%), Gaps = 5/131 (3%)
Frame = +3
Query: 66 MASSTPPPHYTLTTANKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTAPKVSLSHHKPR 245
MASSTPPPH LTT +KP HH PR
Sbjct: 1 MASSTPPPHCALTT-SKPYQNHPLPQQNHPHPH---------------------PHHHPR 38
Query: 246 N-----AANPPSRIPKTTLPGNPSFHSFSPSLPRSKSEFSASDFSGRRSTRYVSKMHFGR 410
N + N P+ T PS + SL S+S+FSA DFSGRRSTR+VSKMHF R
Sbjct: 39 NHPHKVSLNRPTHPRHATTHPPPSQNPSFLSLSSSRSDFSA-DFSGRRSTRFVSKMHFNR 97
Query: 411 QKTTAASRHTS 443
+ + SRH+S
Sbjct: 98 SRVSGTSRHSS 108
>XP_019235219.1 PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic isoform X1 [Nicotiana attenuata]
OIT06997.1 pentatricopeptide repeat-containing protein,
chloroplastic [Nicotiana attenuata]
Length = 845
Score = 69.7 bits (169), Expect = 4e-11
Identities = 51/131 (38%), Positives = 61/131 (46%), Gaps = 5/131 (3%)
Frame = +3
Query: 66 MASSTPPPHYTLTTANKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTAPKVSLSHHKPR 245
MASSTPPPH LTT +KP HH PR
Sbjct: 1 MASSTPPPHCALTT-SKPYQNHPLPQQNHPHPH---------------------PHHHPR 38
Query: 246 N-----AANPPSRIPKTTLPGNPSFHSFSPSLPRSKSEFSASDFSGRRSTRYVSKMHFGR 410
N + N P+ T PS + SL S+S+FSA DFSGRRSTR+VSKMHF R
Sbjct: 39 NHPHKVSLNRPTHPRHATTHPPPSQNPSFLSLSSSRSDFSA-DFSGRRSTRFVSKMHFNR 97
Query: 411 QKTTAASRHTS 443
+ + SRH+S
Sbjct: 98 SRVSGTSRHSS 108
>XP_010087216.1 hypothetical protein L484_009725 [Morus notabilis] EXB28566.1
hypothetical protein L484_009725 [Morus notabilis]
Length = 871
Score = 68.9 bits (167), Expect = 8e-11
Identities = 44/85 (51%), Positives = 53/85 (62%), Gaps = 5/85 (5%)
Frame = +3
Query: 204 FTAPKVSLSHHKP-----RNAANPPSRIPKTTLPGNPSFHSFSPSLPRSKSEFSASDFSG 368
+T KVSL+ P RNAA P++ NP+FHS SLP KS+ +A FSG
Sbjct: 42 WTTQKVSLTKPSPSPPPARNAAATPAQHASQ----NPAFHSLC-SLPAPKSDLAAV-FSG 95
Query: 369 RRSTRYVSKMHFGRQKTTAASRHTS 443
RRSTR+VSKMH GR KTT SRHT+
Sbjct: 96 RRSTRFVSKMHLGRPKTTVGSRHTA 120
>XP_010418730.1 PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like, partial [Camelina sativa]
Length = 856
Score = 68.6 bits (166), Expect = 1e-10
Identities = 41/68 (60%), Positives = 48/68 (70%)
Frame = +3
Query: 240 PRNAANPPSRIPKTTLPGNPSFHSFSPSLPRSKSEFSASDFSGRRSTRYVSKMHFGRQKT 419
PR +A PPS + T P S +FSP L KS+ S SDFSGRRSTR+VSKMHFGR KT
Sbjct: 33 PRGSAPPPSSVA-TVAPAQAS--NFSP-LQTQKSDLS-SDFSGRRSTRFVSKMHFGRPKT 87
Query: 420 TAASRHTS 443
T A+RH+S
Sbjct: 88 TMATRHSS 95
>NP_001324971.1 s uncoupled 1 [Arabidopsis thaliana] ANM62844.1 s uncoupled 1
[Arabidopsis thaliana]
Length = 839
Score = 68.2 bits (165), Expect = 2e-10
Identities = 39/68 (57%), Positives = 46/68 (67%)
Frame = +3
Query: 240 PRNAANPPSRIPKTTLPGNPSFHSFSPSLPRSKSEFSASDFSGRRSTRYVSKMHFGRQKT 419
PR +A PPS + +FSP L KS+ S SDFSGRRSTR+VSKMHFGRQKT
Sbjct: 98 PRGSAPPPSSVATVAPAQLSQPPNFSP-LQTPKSDLS-SDFSGRRSTRFVSKMHFGRQKT 155
Query: 420 TAASRHTS 443
T A+RH+S
Sbjct: 156 TMATRHSS 163
>OAP08443.1 GUN1 [Arabidopsis thaliana]
Length = 918
Score = 68.2 bits (165), Expect = 2e-10
Identities = 39/68 (57%), Positives = 46/68 (67%)
Frame = +3
Query: 240 PRNAANPPSRIPKTTLPGNPSFHSFSPSLPRSKSEFSASDFSGRRSTRYVSKMHFGRQKT 419
PR +A PPS + +FSP L KS+ S SDFSGRRSTR+VSKMHFGRQKT
Sbjct: 98 PRGSAPPPSSVATVAPAQLSQPPNFSP-LQTPKSDLS-SDFSGRRSTRFVSKMHFGRQKT 155
Query: 420 TAASRHTS 443
T A+RH+S
Sbjct: 156 TMATRHSS 163