BLASTX nr result
ID: Panax25_contig00001404
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00001404
(1084 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAA73171.1 histone H1 [Apium graveolens] 97 4e-19
XP_007050394.2 PREDICTED: histone H1 [Theobroma cacao] 96 5e-19
EOX94551.1 Winged-helix DNA-binding transcription factor family ... 96 5e-19
XP_013631826.1 PREDICTED: histone H1.2 [Brassica oleracea var. o... 95 1e-18
XP_012473820.1 PREDICTED: histone H1-like isoform X2 [Gossypium ... 94 2e-18
XP_016699758.1 PREDICTED: histone H1-like [Gossypium hirsutum] 94 2e-18
XP_016675067.1 PREDICTED: histone H1-like [Gossypium hirsutum] X... 94 2e-18
XP_012473819.1 PREDICTED: histone H1-like isoform X1 [Gossypium ... 94 3e-18
KJB42223.1 hypothetical protein B456_007G143000 [Gossypium raimo... 93 3e-18
XP_010679186.1 PREDICTED: histone H1 [Beta vulgaris subsp. vulga... 94 3e-18
XP_019178568.1 PREDICTED: histone H1-like isoform X2 [Ipomoea nil] 93 4e-18
XP_019178567.1 PREDICTED: histone H1-like isoform X1 [Ipomoea nil] 93 7e-18
XP_009141087.1 PREDICTED: histone H1.2 [Brassica rapa] XP_013643... 92 7e-18
XP_017631560.1 PREDICTED: histone H1-like [Gossypium arboreum] 92 1e-17
XP_016710180.1 PREDICTED: histone H1-like [Gossypium hirsutum] 92 1e-17
XP_016710014.1 PREDICTED: histone H1-like [Gossypium hirsutum] 92 1e-17
XP_012490662.1 PREDICTED: histone H1-like [Gossypium raimondii] ... 92 1e-17
XP_013722567.1 PREDICTED: histone H1.2-like [Brassica napus] CDX... 92 1e-17
ACU21235.1 unknown, partial [Glycine max] 88 3e-17
JAU37847.1 Histone H1.2 [Noccaea caerulescens] 91 3e-17
>CAA73171.1 histone H1 [Apium graveolens]
Length = 302
Score = 96.7 bits (239), Expect = 4e-19
Identities = 60/127 (47%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
Frame = +2
Query: 2 PTEGVEDYVPPPASELPEEK-PAAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHPSYL 178
P EGVE+ VP +E PEE P AED HP YL
Sbjct: 10 PMEGVEEEVPVTVTEAPEEAAPPAEDPAPKKGKELKPKKAAAPRKPRSAP----AHPPYL 65
Query: 179 EMTEDAITTLKERNGSSQFAIQKFIEEKQKHLPGAFRXXXXXXXXXXTAAGKLVKIKNSY 358
EM DAIT+LKER GSSQ AIQKF+E K K LP FR AAGKLVK+K SY
Sbjct: 66 EMITDAITSLKERTGSSQQAIQKFLEAKHKDLPAVFRKMLSNNLKKLVAAGKLVKVKASY 125
Query: 359 KLPSTRS 379
KLPS +S
Sbjct: 126 KLPSAKS 132
>XP_007050394.2 PREDICTED: histone H1 [Theobroma cacao]
Length = 284
Score = 95.9 bits (237), Expect = 5e-19
Identities = 46/73 (63%), Positives = 54/73 (73%)
Frame = +2
Query: 161 THPSYLEMTEDAITTLKERNGSSQFAIQKFIEEKQKHLPGAFRXXXXXXXXXXTAAGKLV 340
+HP Y EM +DA+ TLKE+ GSSQ+AI KFIEEKQKHLPG F+ AAGKLV
Sbjct: 55 SHPPYEEMIKDAVVTLKEKTGSSQYAITKFIEEKQKHLPGTFKKLLLFHLKKLVAAGKLV 114
Query: 341 KIKNSYKLPSTRS 379
K+KNS+KLPS RS
Sbjct: 115 KVKNSFKLPSARS 127
>EOX94551.1 Winged-helix DNA-binding transcription factor family protein
[Theobroma cacao]
Length = 284
Score = 95.9 bits (237), Expect = 5e-19
Identities = 46/73 (63%), Positives = 54/73 (73%)
Frame = +2
Query: 161 THPSYLEMTEDAITTLKERNGSSQFAIQKFIEEKQKHLPGAFRXXXXXXXXXXTAAGKLV 340
+HP Y EM +DA+ TLKE+ GSSQ+AI KFIEEKQKHLPG F+ AAGKLV
Sbjct: 55 SHPPYEEMIKDAVVTLKEKTGSSQYAITKFIEEKQKHLPGTFKKLLLFHLKKLVAAGKLV 114
Query: 341 KIKNSYKLPSTRS 379
K+KNS+KLPS RS
Sbjct: 115 KVKNSFKLPSARS 127
>XP_013631826.1 PREDICTED: histone H1.2 [Brassica oleracea var. oleracea]
Length = 268
Score = 94.7 bits (234), Expect = 1e-18
Identities = 56/122 (45%), Positives = 67/122 (54%)
Frame = +2
Query: 14 VEDYVPPPASELPEEKPAAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHPSYLEMTED 193
VE+ PASE +KPAA+ +HP+Y EM +D
Sbjct: 12 VEETTTAPASE---KKPAAKGGKAKKTKEVKAAAAAPKKKPAPRKRASSSHPTYEEMIKD 68
Query: 194 AITTLKERNGSSQFAIQKFIEEKQKHLPGAFRXXXXXXXXXXTAAGKLVKIKNSYKLPST 373
AITTLKER GSSQ+AIQKFIEEKQK LP FR A+GKLVK+K S+KLPS
Sbjct: 69 AITTLKERTGSSQYAIQKFIEEKQKSLPPTFRKLLLVNLKRLVASGKLVKVKGSFKLPSA 128
Query: 374 RS 379
+S
Sbjct: 129 KS 130
>XP_012473820.1 PREDICTED: histone H1-like isoform X2 [Gossypium raimondii]
KJB22926.1 hypothetical protein B456_004G074200
[Gossypium raimondii]
Length = 276
Score = 94.0 bits (232), Expect = 2e-18
Identities = 48/73 (65%), Positives = 53/73 (72%)
Frame = +2
Query: 161 THPSYLEMTEDAITTLKERNGSSQFAIQKFIEEKQKHLPGAFRXXXXXXXXXXTAAGKLV 340
THP Y EM +DAI TLKER GSSQ+AI KFIEEKQK+LPG F+ AAGKLV
Sbjct: 55 THPPYEEMIKDAIVTLKERTGSSQYAIAKFIEEKQKNLPGNFKKLLLVHLKKLVAAGKLV 114
Query: 341 KIKNSYKLPSTRS 379
K+K SYKLPS RS
Sbjct: 115 KVKASYKLPSARS 127
>XP_016699758.1 PREDICTED: histone H1-like [Gossypium hirsutum]
Length = 280
Score = 94.0 bits (232), Expect = 2e-18
Identities = 48/73 (65%), Positives = 53/73 (72%)
Frame = +2
Query: 161 THPSYLEMTEDAITTLKERNGSSQFAIQKFIEEKQKHLPGAFRXXXXXXXXXXTAAGKLV 340
THP Y EM +DAI TLKER GSSQ+AI KFIEEKQK+LPG F+ AAGKLV
Sbjct: 55 THPPYEEMIKDAIVTLKERTGSSQYAIAKFIEEKQKNLPGNFKKLLLVHLKKLVAAGKLV 114
Query: 341 KIKNSYKLPSTRS 379
K+K SYKLPS RS
Sbjct: 115 KVKASYKLPSARS 127
>XP_016675067.1 PREDICTED: histone H1-like [Gossypium hirsutum] XP_017626599.1
PREDICTED: histone H1-like [Gossypium arboreum]
KHG19938.1 Histone H1 [Gossypium arboreum]
Length = 280
Score = 94.0 bits (232), Expect = 2e-18
Identities = 48/73 (65%), Positives = 53/73 (72%)
Frame = +2
Query: 161 THPSYLEMTEDAITTLKERNGSSQFAIQKFIEEKQKHLPGAFRXXXXXXXXXXTAAGKLV 340
THP Y EM +DAI TLKER GSSQ+AI KFIEEKQK+LPG F+ AAGKLV
Sbjct: 55 THPPYEEMIKDAIVTLKERTGSSQYAIAKFIEEKQKNLPGNFKKLLLVHLKKLVAAGKLV 114
Query: 341 KIKNSYKLPSTRS 379
K+K SYKLPS RS
Sbjct: 115 KVKASYKLPSARS 127
>XP_012473819.1 PREDICTED: histone H1-like isoform X1 [Gossypium raimondii]
KJB22924.1 hypothetical protein B456_004G074200
[Gossypium raimondii]
Length = 286
Score = 94.0 bits (232), Expect = 3e-18
Identities = 48/73 (65%), Positives = 53/73 (72%)
Frame = +2
Query: 161 THPSYLEMTEDAITTLKERNGSSQFAIQKFIEEKQKHLPGAFRXXXXXXXXXXTAAGKLV 340
THP Y EM +DAI TLKER GSSQ+AI KFIEEKQK+LPG F+ AAGKLV
Sbjct: 55 THPPYEEMIKDAIVTLKERTGSSQYAIAKFIEEKQKNLPGNFKKLLLVHLKKLVAAGKLV 114
Query: 341 KIKNSYKLPSTRS 379
K+K SYKLPS RS
Sbjct: 115 KVKASYKLPSARS 127
>KJB42223.1 hypothetical protein B456_007G143000 [Gossypium raimondii]
Length = 256
Score = 93.2 bits (230), Expect = 3e-18
Identities = 46/72 (63%), Positives = 53/72 (73%)
Frame = +2
Query: 164 HPSYLEMTEDAITTLKERNGSSQFAIQKFIEEKQKHLPGAFRXXXXXXXXXXTAAGKLVK 343
HP Y EM +DAI TLKE+ GSSQ+AI KFIEEKQK+LPG F+ AAGKLVK
Sbjct: 56 HPPYEEMVKDAIVTLKEKTGSSQYAITKFIEEKQKNLPGNFKKLLLFHLKKLVAAGKLVK 115
Query: 344 IKNSYKLPSTRS 379
+KNSYKLPS +S
Sbjct: 116 VKNSYKLPSAKS 127
>XP_010679186.1 PREDICTED: histone H1 [Beta vulgaris subsp. vulgaris] KMT10292.1
hypothetical protein BVRB_5g120470 [Beta vulgaris subsp.
vulgaris]
Length = 305
Score = 94.0 bits (232), Expect = 3e-18
Identities = 47/73 (64%), Positives = 53/73 (72%)
Frame = +2
Query: 161 THPSYLEMTEDAITTLKERNGSSQFAIQKFIEEKQKHLPGAFRXXXXXXXXXXTAAGKLV 340
THP Y EM +AITTLKERNGSSQ AIQKFIEEK K+LP FR A+G+LV
Sbjct: 57 THPPYFEMMSEAITTLKERNGSSQHAIQKFIEEKHKNLPSNFRKLLLVNLKKFVASGRLV 116
Query: 341 KIKNSYKLPSTRS 379
K+K S+KLPSTRS
Sbjct: 117 KVKGSFKLPSTRS 129
>XP_019178568.1 PREDICTED: histone H1-like isoform X2 [Ipomoea nil]
Length = 257
Score = 92.8 bits (229), Expect = 4e-18
Identities = 47/72 (65%), Positives = 51/72 (70%)
Frame = +2
Query: 164 HPSYLEMTEDAITTLKERNGSSQFAIQKFIEEKQKHLPGAFRXXXXXXXXXXTAAGKLVK 343
HP Y EM ++AI TLKER GSSQ+AIQKFIEEKQK LP FR AA KLVK
Sbjct: 62 HPPYFEMVQEAIVTLKERTGSSQYAIQKFIEEKQKTLPSNFRKLLLFHLKKFVAADKLVK 121
Query: 344 IKNSYKLPSTRS 379
+KNSYKLPS RS
Sbjct: 122 VKNSYKLPSARS 133
>XP_019178567.1 PREDICTED: histone H1-like isoform X1 [Ipomoea nil]
Length = 286
Score = 92.8 bits (229), Expect = 7e-18
Identities = 47/72 (65%), Positives = 51/72 (70%)
Frame = +2
Query: 164 HPSYLEMTEDAITTLKERNGSSQFAIQKFIEEKQKHLPGAFRXXXXXXXXXXTAAGKLVK 343
HP Y EM ++AI TLKER GSSQ+AIQKFIEEKQK LP FR AA KLVK
Sbjct: 62 HPPYFEMVQEAIVTLKERTGSSQYAIQKFIEEKQKTLPSNFRKLLLFHLKKFVAADKLVK 121
Query: 344 IKNSYKLPSTRS 379
+KNSYKLPS RS
Sbjct: 122 VKNSYKLPSARS 133
>XP_009141087.1 PREDICTED: histone H1.2 [Brassica rapa] XP_013643573.1 PREDICTED:
histone H1.2-like [Brassica napus] CDY29656.1
BnaA04g17710D [Brassica napus]
Length = 270
Score = 92.4 bits (228), Expect = 7e-18
Identities = 46/73 (63%), Positives = 54/73 (73%)
Frame = +2
Query: 161 THPSYLEMTEDAITTLKERNGSSQFAIQKFIEEKQKHLPGAFRXXXXXXXXXXTAAGKLV 340
+HP+Y EM +DAITTLKER GSSQ+AIQKFIEEKQK LP FR A+GKLV
Sbjct: 60 SHPTYEEMIKDAITTLKERTGSSQYAIQKFIEEKQKSLPPTFRKLLLVNLKRLVASGKLV 119
Query: 341 KIKNSYKLPSTRS 379
K+K S+KLPS +S
Sbjct: 120 KVKGSFKLPSAKS 132
>XP_017631560.1 PREDICTED: histone H1-like [Gossypium arboreum]
Length = 275
Score = 92.0 bits (227), Expect = 1e-17
Identities = 45/72 (62%), Positives = 53/72 (73%)
Frame = +2
Query: 164 HPSYLEMTEDAITTLKERNGSSQFAIQKFIEEKQKHLPGAFRXXXXXXXXXXTAAGKLVK 343
HP Y EM +DAI TLKE+ GSSQ+AI KFIEEKQK+LPG F+ AAGKLVK
Sbjct: 56 HPPYEEMVKDAIVTLKEKTGSSQYAITKFIEEKQKNLPGNFKKLLLFHLKKLVAAGKLVK 115
Query: 344 IKNSYKLPSTRS 379
+KNSYKLPS ++
Sbjct: 116 VKNSYKLPSAKA 127
>XP_016710180.1 PREDICTED: histone H1-like [Gossypium hirsutum]
Length = 275
Score = 92.0 bits (227), Expect = 1e-17
Identities = 45/72 (62%), Positives = 53/72 (73%)
Frame = +2
Query: 164 HPSYLEMTEDAITTLKERNGSSQFAIQKFIEEKQKHLPGAFRXXXXXXXXXXTAAGKLVK 343
HP Y EM +DAI TLKE+ GSSQ+AI KFIEEKQK+LPG F+ AAGKLVK
Sbjct: 56 HPPYEEMVKDAIVTLKEKTGSSQYAITKFIEEKQKNLPGNFKKLLLFHLKKLVAAGKLVK 115
Query: 344 IKNSYKLPSTRS 379
+KNSYKLPS ++
Sbjct: 116 VKNSYKLPSAKA 127
>XP_016710014.1 PREDICTED: histone H1-like [Gossypium hirsutum]
Length = 275
Score = 92.0 bits (227), Expect = 1e-17
Identities = 45/72 (62%), Positives = 53/72 (73%)
Frame = +2
Query: 164 HPSYLEMTEDAITTLKERNGSSQFAIQKFIEEKQKHLPGAFRXXXXXXXXXXTAAGKLVK 343
HP Y EM +DAI TLKE+ GSSQ+AI KFIEEKQK+LPG F+ AAGKLVK
Sbjct: 56 HPPYEEMVKDAIVTLKEKTGSSQYAITKFIEEKQKNLPGNFKKLLLFHLKKLVAAGKLVK 115
Query: 344 IKNSYKLPSTRS 379
+KNSYKLPS ++
Sbjct: 116 VKNSYKLPSAKA 127
>XP_012490662.1 PREDICTED: histone H1-like [Gossypium raimondii] KJB42222.1
hypothetical protein B456_007G143000 [Gossypium
raimondii]
Length = 275
Score = 92.0 bits (227), Expect = 1e-17
Identities = 45/72 (62%), Positives = 53/72 (73%)
Frame = +2
Query: 164 HPSYLEMTEDAITTLKERNGSSQFAIQKFIEEKQKHLPGAFRXXXXXXXXXXTAAGKLVK 343
HP Y EM +DAI TLKE+ GSSQ+AI KFIEEKQK+LPG F+ AAGKLVK
Sbjct: 56 HPPYEEMVKDAIVTLKEKTGSSQYAITKFIEEKQKNLPGNFKKLLLFHLKKLVAAGKLVK 115
Query: 344 IKNSYKLPSTRS 379
+KNSYKLPS ++
Sbjct: 116 VKNSYKLPSAKA 127
>XP_013722567.1 PREDICTED: histone H1.2-like [Brassica napus] CDX97804.1
BnaC04g41350D [Brassica napus]
Length = 272
Score = 91.7 bits (226), Expect = 1e-17
Identities = 46/73 (63%), Positives = 53/73 (72%)
Frame = +2
Query: 161 THPSYLEMTEDAITTLKERNGSSQFAIQKFIEEKQKHLPGAFRXXXXXXXXXXTAAGKLV 340
+HP+Y EM +DAITTLKER GSSQ+AIQKFIEEKQK LP FR A GKLV
Sbjct: 60 SHPTYEEMIKDAITTLKERTGSSQYAIQKFIEEKQKSLPPTFRKLLLVNLKRLVALGKLV 119
Query: 341 KIKNSYKLPSTRS 379
K+K S+KLPS +S
Sbjct: 120 KVKGSFKLPSAKS 132
>ACU21235.1 unknown, partial [Glycine max]
Length = 164
Score = 88.2 bits (217), Expect = 3e-17
Identities = 46/72 (63%), Positives = 50/72 (69%)
Frame = +2
Query: 161 THPSYLEMTEDAITTLKERNGSSQFAIQKFIEEKQKHLPGAFRXXXXXXXXXXTAAGKLV 340
THPSY EM +DAIT+LKER GSSQ AI KFIEEK K LP FR AAGKLV
Sbjct: 54 THPSYEEMIKDAITSLKERTGSSQHAIAKFIEEKHKQLPPNFRKLLLYHLKKLVAAGKLV 113
Query: 341 KIKNSYKLPSTR 376
K+K S+KLP TR
Sbjct: 114 KVKGSFKLPPTR 125
>JAU37847.1 Histone H1.2 [Noccaea caerulescens]
Length = 283
Score = 90.9 bits (224), Expect = 3e-17
Identities = 46/73 (63%), Positives = 53/73 (72%)
Frame = +2
Query: 161 THPSYLEMTEDAITTLKERNGSSQFAIQKFIEEKQKHLPGAFRXXXXXXXXXXTAAGKLV 340
+HP+Y EM +DAI TLKER GSSQ+AIQKFIEEKQK LP FR A+GKLV
Sbjct: 61 SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKQKSLPPTFRKLLLVNLKRLVASGKLV 120
Query: 341 KIKNSYKLPSTRS 379
K+K S+KLPS RS
Sbjct: 121 KVKASFKLPSARS 133