BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00038992
         (654 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ACY72569.1 unknown [Oryza sativa Japonica Group]                       61   6e-22
AAU43956.1 unknown protein [Oryza sativa Japonica Group] AAU4406...    61   5e-21
CAN66496.1 hypothetical protein VITISV_036886 [Vitis vinifera]         57   5e-21
CAN82859.1 hypothetical protein VITISV_025377 [Vitis vinifera]         65   6e-21
BAB90546.1 putative rice retrotransposon retrofit gag/pol polypr...    61   1e-20
ACV42639.1 gag/pol [Oryza sativa Japonica Group]                       61   1e-20
AAR88589.1 putative copia-like retrotransposon protein [Oryza sa...    62   1e-20
CAN74695.1 hypothetical protein VITISV_024648 [Vitis vinifera]         64   2e-20
AAB82754.1 retrofit [Oryza longistaminata]                             59   4e-20
CAN82221.1 hypothetical protein VITISV_015226 [Vitis vinifera]         69   5e-20
ABA98049.1 retrotransposon protein, putative, Ty1-copia subclass...    58   1e-19
CAN68489.1 hypothetical protein VITISV_037543 [Vitis vinifera]         67   1e-19
KYP50444.1 Retrovirus-related Pol polyprotein from transposon TN...    60   1e-19
CAN83506.1 hypothetical protein VITISV_027576 [Vitis vinifera]         62   1e-19
KYP66618.1 Retrovirus-related Pol polyprotein from transposon TN...    61   2e-19
AAT85031.1 putative polyprotein [Oryza sativa Japonica Group] AB...    65   3e-19
KFK45117.1 hypothetical protein AALP_AA1G346500, partial [Arabis...    58   4e-19
CAN77680.1 hypothetical protein VITISV_040762 [Vitis vinifera]         58   4e-19
CAN81099.1 hypothetical protein VITISV_017741 [Vitis vinifera]         62   5e-19
KHN21230.1 Retrovirus-related Pol polyprotein from transposon TN...    57   1e-18

>ACY72569.1 unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score = 61.2 bits (147), Expect(3) = 6e-22
 Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
 Frame = -1

Query: 216 RFVLELIMCDVWGSAPLTSLHGNKYYVLLL---------YFIKFCSEVASKFLQFQSMVE 64
           +F LEL+  DVWG AP  S+  NKYYV  +         Y +K+ SEV  KF +FQ++VE
Sbjct: 512 QFPLELVFSDVWGPAP-ESVGRNKYYVSFIDDFSKFTWIYLLKYKSEVFEKFKEFQALVE 570

Query: 63  HLFNFKIKYFQTDYAKDFSPL 1
            +F+ KI   QTD+  ++  L
Sbjct: 571 RMFDRKIIAMQTDWGGEYQKL 591



 Score = 57.8 bits (138), Expect(3) = 6e-22
 Identities = 24/75 (32%), Positives = 46/75 (61%)
 Frame = -2

Query: 647 INHLCSTTFNSKNKKFHLSQILHVPSALKKLLFVNKFCRDNNIYFKFHLSYFHVKDCVSQ 468
           I+H+  TT ++ ++  HL+ +L+VP A K L+  ++   DN+ + + H  +F +KD V++
Sbjct: 361 ISHIGHTTVHTPSRNIHLNNVLYVPQAKKSLISASQLATDNSAFLELHSKFFSIKDQVTK 420

Query: 467 TTLLNGRTKDELHTL 423
             LL GR +  L+ +
Sbjct: 421 DILLEGRCRHGLYPI 435



 Score = 33.1 bits (74), Expect(3) = 6e-22
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -3

Query: 370 WYRRPGHPHERVLRHIISKHNLGVSSKK-GSPVCMTCHMEKACRL 239
           W+ R GHP   +++ +ISK+NL  S +     VC  C   K+ +L
Sbjct: 458 WHSRLGHPSLPIVKQVISKNNLPCSVESVNQSVCNACQEAKSRQL 502


>AAU43956.1 unknown protein [Oryza sativa Japonica Group] AAU44069.1 putative
           polyprotein [Oryza sativa Japonica Group]
          Length = 1447

 Score = 60.8 bits (146), Expect(3) = 5e-21
 Identities = 37/78 (47%), Positives = 46/78 (58%), Gaps = 9/78 (11%)
 Frame = -1

Query: 207 LELIMCDVWGSAPLTSLHGNKYYVLL---------LYFIKFCSEVASKFLQFQSMVEHLF 55
           LELI  DVWG A LTS+ G +YYV           LY IK  SEV  KF +FQ++VE LF
Sbjct: 515 LELIYSDVWGPA-LTSVGGKQYYVSFIGDYSKFTWLYLIKHKSEVIQKFHEFQALVERLF 573

Query: 54  NFKIKYFQTDYAKDFSPL 1
           N KI   Q+D+  ++  L
Sbjct: 574 NRKIIAMQSDWGGEYEKL 591



 Score = 56.2 bits (134), Expect(3) = 5e-21
 Identities = 25/75 (33%), Positives = 43/75 (57%)
 Frame = -2

Query: 647 INHLCSTTFNSKNKKFHLSQILHVPSALKKLLFVNKFCRDNNIYFKFHLSYFHVKDCVSQ 468
           I+H+  +T  + N+  HL  IL+VP+A K L+  N+   DN+ Y + +  YF++KD  ++
Sbjct: 358 ISHIGHSTVRTPNRDIHLRNILYVPNANKNLVSANRLVSDNSAYMELYSKYFNLKDLATK 417

Query: 467 TTLLNGRTKDELHTL 423
             L  G  +  L+ L
Sbjct: 418 KLLFRGPCRGRLYAL 432



 Score = 32.0 bits (71), Expect(3) = 5e-21
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -3

Query: 370 WYRRPGHPHERVLRHIISKHNLG-VSSKKGSPVCMTCHMEKACRL 239
           W+ R GHP   ++  +ISK+NL  ++      VC  C   K+ +L
Sbjct: 458 WHSRLGHPASPIVEKVISKNNLPCLAESNKQSVCDACQQGKSHQL 502


>CAN66496.1 hypothetical protein VITISV_036886 [Vitis vinifera]
          Length = 1092

 Score = 57.0 bits (136), Expect(3) = 5e-21
 Identities = 27/80 (33%), Positives = 48/80 (60%)
 Frame = -2

Query: 647 INHLCSTTFNSKNKKFHLSQILHVPSALKKLLFVNKFCRDNNIYFKFHLSYFHVKDCVSQ 468
           I H+ STT +S ++   L + LHVP   K L+  +KF  DNN+  +FH  ++ VKD ++ 
Sbjct: 239 IAHIGSTTLSSPSRSLMLKETLHVPLIHKNLISXHKFTHDNNVTIEFHPFFYLVKDRMTG 298

Query: 467 TTLLNGRTKDELHTLLVEPS 408
             L+ GR ++ ++ + ++ S
Sbjct: 299 AXLMRGRCENGVYPVALQSS 318



 Score = 54.7 bits (130), Expect(3) = 5e-21
 Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 9/78 (11%)
 Frame = -1

Query: 207 LELIMCDVWGSAPLTSLHGNKYYVLLL-YFIKFC--------SEVASKFLQFQSMVEHLF 55
           LE +  DVWG +P++S+ G  YY+LL+ +F K+C        S+V S F+QF  MV++ F
Sbjct: 393 LEFLYDDVWGPSPVSSIDGYHYYLLLVDHFTKYCWFXPLXHKSDVHSTFVQFTXMVKNQF 452

Query: 54  NFKIKYFQTDYAKDFSPL 1
           + K+K   +D   +F  L
Sbjct: 453 SCKLKNLYSDNGGEFIXL 470



 Score = 37.4 bits (85), Expect(3) = 5e-21
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = -3

Query: 370 WYRRPGHPHERVLRHIISKHNLGVSSKKGSPVCMTCHMEKACRL 239
           W+ R GH   ++L  ++  H+L V+S K +  C++C   K+ +L
Sbjct: 337 WHHRLGHXTPKILSSLLQSHDLPVASSKSTLSCISCQCNKSHKL 380


>CAN82859.1 hypothetical protein VITISV_025377 [Vitis vinifera]
          Length = 1578

 Score = 65.1 bits (157), Expect(3) = 6e-21
 Identities = 29/75 (38%), Positives = 47/75 (62%)
 Frame = -2

Query: 653 VPINHLCSTTFNSKNKKFHLSQILHVPSALKKLLFVNKFCRDNNIYFKFHLSYFHVKDCV 474
           +P++H+ S +  S N+ FHL   L VP   K L+ V+ F + NN+Y +FH +YF VKD +
Sbjct: 298 LPVSHIGSLSLASSNRVFHLCDTLFVPRIQKNLISVHHFTKHNNVYLEFHPTYFLVKDQI 357

Query: 473 SQTTLLNGRTKDELH 429
           +   LL G+ +D ++
Sbjct: 358 TGAILLKGKCEDGVY 372



 Score = 47.8 bits (112), Expect(3) = 6e-21
 Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 9/75 (12%)
 Frame = -1

Query: 207 LELIMCDVWGSAPLTSLHGNKYYVLLLY-FIKFC--------SEVASKFLQFQSMVEHLF 55
           +ELI  DVWG +    + G+KYYV+  Y + K+         S V + F QFQ++VE+ F
Sbjct: 454 MELIYKDVWGPSHDIGVDGSKYYVIFFYHYTKYIWLYPMTHKSNVQTIFPQFQNLVENKF 513

Query: 54  NFKIKYFQTDYAKDF 10
           N KIK   +D   ++
Sbjct: 514 NTKIKNLYSDNGGEY 528



 Score = 35.8 bits (81), Expect(3) = 6e-21
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = -3

Query: 370 WYRRPGHPHERVLRHIISKHNLGVSSKKGSPVCMTCHMEKACRLTLD 230
           W++R GHP  +++ H+I   +L  +      +C +C   KA R T +
Sbjct: 398 WHKRLGHPSSKLVNHLIHVFSLPTNKNGHLSLCTSCSQNKAHRQTFN 444


>BAB90546.1 putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
           sativa Japonica Group]
          Length = 1448

 Score = 61.2 bits (147), Expect(3) = 1e-20
 Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
 Frame = -1

Query: 216 RFVLELIMCDVWGSAPLTSLHGNKYYVLLL---------YFIKFCSEVASKFLQFQSMVE 64
           +F LEL+  DVWG AP  S+  NKYYV  +         Y +K+ SEV  KF +FQ++VE
Sbjct: 515 QFPLELVFSDVWGPAP-ESVGRNKYYVSFIDDFSKFTWIYLLKYKSEVFEKFKEFQALVE 573

Query: 63  HLFNFKIKYFQTDYAKDFSPL 1
            +F+ KI   QTD+  ++  L
Sbjct: 574 RMFDRKIIAMQTDWGGEYQKL 594



 Score = 54.7 bits (130), Expect(3) = 1e-20
 Identities = 22/75 (29%), Positives = 45/75 (60%)
 Frame = -2

Query: 647 INHLCSTTFNSKNKKFHLSQILHVPSALKKLLFVNKFCRDNNIYFKFHLSYFHVKDCVSQ 468
           I+H+  T  ++ ++  HL+ +L+VP A K L+  ++   DN+ + + H  +F +KD V++
Sbjct: 364 ISHIGHTIVHTPSRNIHLNNVLYVPQAKKNLISASQLAADNSAFLELHSKFFSIKDQVTR 423

Query: 467 TTLLNGRTKDELHTL 423
             LL G+ +  L+ +
Sbjct: 424 DVLLEGKCRHGLYPI 438



 Score = 32.0 bits (71), Expect(3) = 1e-20
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -3

Query: 370 WYRRPGHPHERVLRHIISKHNLGVSSKK-GSPVCMTCHMEKACRL 239
           W+ R GHP   +++ +IS++NL  S +     VC  C   K+ +L
Sbjct: 461 WHSRLGHPSLPIVKQVISRNNLPCSVESVNQSVCNACQEAKSHQL 505


>ACV42639.1 gag/pol [Oryza sativa Japonica Group]
          Length = 1448

 Score = 61.2 bits (147), Expect(3) = 1e-20
 Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
 Frame = -1

Query: 216 RFVLELIMCDVWGSAPLTSLHGNKYYVLLL---------YFIKFCSEVASKFLQFQSMVE 64
           +F LEL+  DVWG AP  S+  NKYYV  +         Y +K+ SEV  KF +FQ++VE
Sbjct: 515 QFPLELVFSDVWGPAP-ESVGRNKYYVSFIDDFSKFTWIYLLKYKSEVFEKFKEFQALVE 573

Query: 63  HLFNFKIKYFQTDYAKDFSPL 1
            +F+ KI   QTD+  ++  L
Sbjct: 574 RMFDRKIIAMQTDWGGEYQKL 594



 Score = 54.7 bits (130), Expect(3) = 1e-20
 Identities = 22/75 (29%), Positives = 45/75 (60%)
 Frame = -2

Query: 647 INHLCSTTFNSKNKKFHLSQILHVPSALKKLLFVNKFCRDNNIYFKFHLSYFHVKDCVSQ 468
           I+H+  T  ++ ++  HL+ +L+VP A K L+  ++   DN+ + + H  +F +KD V++
Sbjct: 364 ISHIGHTIVHTPSRNIHLNNVLYVPQAKKNLISASQLAADNSAFLELHSKFFSIKDQVTR 423

Query: 467 TTLLNGRTKDELHTL 423
             LL G+ +  L+ +
Sbjct: 424 DVLLEGKCRHGLYPI 438



 Score = 32.0 bits (71), Expect(3) = 1e-20
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -3

Query: 370 WYRRPGHPHERVLRHIISKHNLGVSSKK-GSPVCMTCHMEKACRL 239
           W+ R GHP   +++ +IS++NL  S +     VC  C   K+ +L
Sbjct: 461 WHSRLGHPSLPIVKQVISRNNLPCSVESVNQSVCNACQEAKSHQL 505


>AAR88589.1 putative copia-like retrotransposon protein [Oryza sativa Japonica
           Group]
          Length = 1399

 Score = 61.6 bits (148), Expect(3) = 1e-20
 Identities = 28/90 (31%), Positives = 50/90 (55%)
 Frame = -2

Query: 647 INHLCSTTFNSKNKKFHLSQILHVPSALKKLLFVNKFCRDNNIYFKFHLSYFHVKDCVSQ 468
           I H+  +  ++  ++ HL  ILHVP A K L+  ++   DN  + + H +YF +KD  ++
Sbjct: 327 IKHIGDSVIHTPTRELHLKNILHVPQAKKNLISAHRLAMDNFAFLEVHSNYFLIKDRATR 386

Query: 467 TTLLNGRTKDELHTLLVEPSFTAFSASRVS 378
            T+L GR +  L++L   P+    +A+  S
Sbjct: 387 NTILKGRCRRRLYSLPTSPAKQVHAATTPS 416



 Score = 56.2 bits (134), Expect(3) = 1e-20
 Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 9/78 (11%)
 Frame = -1

Query: 207 LELIMCDVWGSAPLTSLHGNKYYVLLL---------YFIKFCSEVASKFLQFQSMVEHLF 55
           LELI  +VWG AP+ S+ G K+YV  +         Y +K  SEV  KF +FQ++VE  F
Sbjct: 477 LELIFSNVWGPAPI-SVGGKKFYVSFIDDYSKFTWVYLLKHKSEVFQKFQEFQTLVERFF 535

Query: 54  NFKIKYFQTDYAKDFSPL 1
             KI   QTD+  ++  L
Sbjct: 536 GHKILAVQTDWGGEYQKL 553



 Score = 30.0 bits (66), Expect(3) = 1e-20
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -3

Query: 370 WYRRPGHPHERVLRHIISKHNLGVSS-KKGSPVCMTCHMEKACRL 239
           W+ R GHP   ++  ++SK+NL  S+      +C  C   K+ +L
Sbjct: 420 WHSRLGHPAVPIVTRVLSKNNLPCSTVANKDSICDACQKGKSHQL 464


>CAN74695.1 hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score = 63.9 bits (154), Expect(3) = 2e-20
 Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
 Frame = -2

Query: 653 VPINHLCSTTFNSK---NKKFHLSQILHVPSALKKLLFVNKFCRDNNIYFKFHLSYFHVK 483
           +PI+H+  T+F+S    +K   L Q+LHVP   K LL V+KF  DN+++F+FH +   VK
Sbjct: 390 LPIHHIGHTSFSSSFIPSKTLALKQLLHVPEITKNLLSVSKFAADNHVFFEFHPTSCFVK 449

Query: 482 DCVSQTTLLNGRTKDELH 429
           D  ++T L++G+ K  L+
Sbjct: 450 DPSTRTVLMHGQLKGGLY 467



 Score = 50.4 bits (119), Expect(3) = 2e-20
 Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
 Frame = -1

Query: 207 LELIMCDVWGSAPLTSLHGNKYYV---------LLLYFIKFCSEVASKFLQFQSMVEHLF 55
           LELI  D+WG A   S HG++YY+           +Y +K  SE    FL F+S VE   
Sbjct: 563 LELIHTDLWGPASTPSSHGHQYYIHFIDAYSRFTWIYMLKHKSEAFQVFLHFKSQVELQL 622

Query: 54  NFKIKYFQTDYAKDF 10
             KIK  Q+D+  ++
Sbjct: 623 GHKIKAVQSDWGGEY 637



 Score = 32.3 bits (72), Expect(3) = 2e-20
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 370 WYRRPGHPHERVLRHIISKHNLGVSSKKGSPVCMTCHMEK 251
           W+ R GHP   ++  +++K NL   +K  S +C  C M K
Sbjct: 507 WHNRLGHPSSHIVSLVLNKCNLPHLNKIPSLICSXCCMGK 546


>AAB82754.1 retrofit [Oryza longistaminata]
          Length = 1445

 Score = 58.9 bits (141), Expect(3) = 4e-20
 Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 9/74 (12%)
 Frame = -1

Query: 216 RFVLELIMCDVWGSAPLTSLHGNKYYVLLL---------YFIKFCSEVASKFLQFQSMVE 64
           +F LEL+  DVWG AP  S+  NKYYV  +         Y +K+ SEV  KF +FQ++VE
Sbjct: 511 QFPLELVFSDVWGPAP-ESVGRNKYYVSFIDDFSKFTWIYLLKYKSEVFEKFKEFQALVE 569

Query: 63  HLFNFKIKYFQTDY 22
            +F+ KI   QTD+
Sbjct: 570 RMFDRKIIAMQTDW 583



 Score = 55.1 bits (131), Expect(3) = 4e-20
 Identities = 26/88 (29%), Positives = 49/88 (55%)
 Frame = -2

Query: 647 INHLCSTTFNSKNKKFHLSQILHVPSALKKLLFVNKFCRDNNIYFKFHLSYFHVKDCVSQ 468
           I+H+  T  ++ ++  HL+ +L+VP A K L+  ++   DN+ + + H  +F +KD V++
Sbjct: 360 ISHIGHTIVHTPSRNIHLNNVLYVPQAKKNLISASQLAADNSAFLELHSKFFSIKDQVTR 419

Query: 467 TTLLNGRTKDELHTLLVEPSFTAFSASR 384
             LL G+ +   H L   P F   S ++
Sbjct: 420 DVLLEGKCR---HGLYPIPKFFGRSTNK 444



 Score = 32.0 bits (71), Expect(3) = 4e-20
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -3

Query: 370 WYRRPGHPHERVLRHIISKHNLGVSSKK-GSPVCMTCHMEKACRL 239
           W+ R GHP   +++ +IS++NL  S +     VC  C   K+ +L
Sbjct: 457 WHSRLGHPSLPIVKQVISRNNLPCSVESVNQSVCNACQEAKSHQL 501


>CAN82221.1 hypothetical protein VITISV_015226 [Vitis vinifera]
          Length = 1007

 Score = 68.9 bits (167), Expect(3) = 5e-20
 Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
 Frame = -2

Query: 647 INHLCSTTFNSKNKKFHLSQILHVPSALKKLLFVNKFCRDNNIYFKFHLSYFHVKDCVSQ 468
           I H  +T F S +K F L Q+LHVP     L+ V++FC DNN +F+FH  +F VKD V++
Sbjct: 69  ILHTYTTFFPSSSKIFQLRQVLHVPDIATNLISVSQFCADNNTFFEFHPRFFFVKDQVTK 128

Query: 467 TTLLNGRTKDELHTLLVE--PSFTAFSAS 387
             LL G  +  L+       PS TAF +S
Sbjct: 129 KILLQGSLEHGLYRFPARFVPSPTAFVSS 157



 Score = 40.4 bits (93), Expect(3) = 5e-20
 Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
 Frame = -1

Query: 201 LIMCDVWGSAPLTSLHGNKYYVLL---------LYFIKFCSEVASKFLQFQSMVEHLFNF 49
           L+  D+WG   + S  G +Y++L          +Y +    +  S F++F+S+VE+ FN 
Sbjct: 231 LLHADLWGPTSIPSTTGARYFILFVDDFSHFSWIYPLHSKDQALSXFIKFKSLVENQFNS 290

Query: 48  KIKYFQTDYAKDF 10
           +I+  ++D   +F
Sbjct: 291 RIQCLRSDNGGEF 303



 Score = 36.2 bits (82), Expect(3) = 5e-20
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -3

Query: 370 WYRRPGHPHERVLRHIISKHNLGVSSKKGSPVCMTCHMEKACRL 239
           W+ R GHP + +L+HI++  N+     K + VC  C   K+ +L
Sbjct: 174 WHSRLGHPADNILKHILTSCNISHQCHKNN-VCCACQFAKSHKL 216


>ABA98049.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1460

 Score = 58.2 bits (139), Expect(3) = 1e-19
 Identities = 28/82 (34%), Positives = 48/82 (58%)
 Frame = -2

Query: 620 NSKNKKFHLSQILHVPSALKKLLFVNKFCRDNNIYFKFHLSYFHVKDCVSQTTLLNGRTK 441
           N  ++  HL  +L+VP A K L+ V++   DN+ + + H  YF +KD +++ TLL GR+ 
Sbjct: 369 NPNSRNIHLRNVLYVPQAKKNLVSVHRLVNDNSAFLELHRDYFFLKDQITRKTLLKGRSW 428

Query: 440 DELHTLLVEPSFTAFSASRVSV 375
             L+ L       A+SA ++S+
Sbjct: 429 RRLYPLPHSSLKQAYSAIKLSL 450



 Score = 52.8 bits (125), Expect(3) = 1e-19
 Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
 Frame = -1

Query: 237 PLIVVLFRFVLELIMCDVWGSAPLTSLHGNKYYVLLL---------YFIKFCSEVASKFL 85
           P+   + +  LEL+  DVWG AP  S+   KYYV  +         Y I+  S+V  KF 
Sbjct: 499 PISSSVSKHPLELVFSDVWGPAP-ESVGRKKYYVSFIDDFSKFTWIYLIQHKSQVFDKFQ 557

Query: 84  QFQSMVEHLFNFKIKYFQTDYAKDFSPL 1
           +FQ MVE  F+ KI   QTD+  ++  L
Sbjct: 558 EFQVMVERQFDRKILAMQTDWGGEYQSL 585



 Score = 33.5 bits (75), Expect(3) = 1e-19
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -3

Query: 370 WYRRPGHPHERVLRHIISKHNLGVSSKKGSPVCMTCHMEKACRL 239
           W+ R GHP    ++ +++K +L  S      VC  C   K+ +L
Sbjct: 453 WHHRLGHPSITTVKQVVNKFSLPCSDLSSESVCNACQQAKSHQL 496


>CAN68489.1 hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score = 67.4 bits (163), Expect(3) = 1e-19
 Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
 Frame = -2

Query: 647 INHLCSTTFNSKNKKFHLSQILHVPSALKKLLFVNKFCRDNNIYFKFHLSYFHVKDCVSQ 468
           I H  +T F S +K F L Q+LHVP     L+ V++FC DNN +F+FH  +F VKD V++
Sbjct: 417 ILHTGTTFFPSSSKTFQLRQVLHVPDIATNLISVSQFCADNNTFFEFHPRFFFVKDQVTK 476

Query: 467 TTLLNGRTKDELHTLLVE--PSFTAFSAS 387
             LL G  +  L+       PS  AF +S
Sbjct: 477 KILLQGSLEHGLYRFPARFVPSPAAFVSS 505



 Score = 40.8 bits (94), Expect(3) = 1e-19
 Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
 Frame = -1

Query: 207 LELIMCDVWGSAPLTSLHGNKYYVLL---------LYFIKFCSEVASKFLQFQSMVEHLF 55
           L L+  D+WG   + S  G +Y++L          +Y +    +  S F++F+S+VE+ F
Sbjct: 577 LALLHADLWGPXSIPSTTGARYFILFVDDFSRFSWIYPLHSKDQALSVFIKFKSLVENQF 636

Query: 54  NFKIKYFQTDYAKDF 10
           N +I+  ++D   +F
Sbjct: 637 NSRIQCLRSDNGGEF 651



 Score = 36.2 bits (82), Expect(3) = 1e-19
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -3

Query: 370 WYRRPGHPHERVLRHIISKHNLGVSSKKGSPVCMTCHMEKACRL 239
           W+ R GHP + +L+HI++  N+     K + VC  C   K+ +L
Sbjct: 522 WHSRLGHPADNILKHILTSCNISHQCHKNN-VCCACQFAKSHKL 564


>KYP50444.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1165

 Score = 60.1 bits (144), Expect(3) = 1e-19
 Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 9/78 (11%)
 Frame = -1

Query: 207 LELIMCDVWGSAPLTSLHGNKYYVLLL---------YFIKFCSEVASKFLQFQSMVEHLF 55
           L+L+  DVWG AP++S+ G KYYVL L         Y +K  S+V   F+QF+++VE+ F
Sbjct: 423 LDLVHSDVWGPAPISSVSGFKYYVLFLDDWSRFTWIYPLKQKSDVFQAFIQFRNLVENQF 482

Query: 54  NFKIKYFQTDYAKDFSPL 1
           N +IK  Q D   +F  L
Sbjct: 483 NKRIKTLQCDGGGEFKSL 500



 Score = 50.8 bits (120), Expect(3) = 1e-19
 Identities = 26/69 (37%), Positives = 41/69 (59%)
 Frame = -2

Query: 629 TTFNSKNKKFHLSQILHVPSALKKLLFVNKFCRDNNIYFKFHLSYFHVKDCVSQTTLLNG 450
           ++ +++ K  +L  IL+VP   K LL ++K   DN+IY +FH     VKD ++   LL G
Sbjct: 278 SSLDTQQKSLNLKDILYVPKITKNLLSISKLTFDNDIYVEFHDVACFVKDKLTGRILLEG 337

Query: 449 RTKDELHTL 423
           + KD L+ L
Sbjct: 338 KIKDGLYQL 346



 Score = 33.5 bits (75), Expect(3) = 1e-19
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -3

Query: 370 WYRRPGHPHERVLRHIISKHNLGVSSKKGSPVCMTCHMEKACRL 239
           W+R+ GHP+ +VL  ++   N+  S  +    C  C   KA  L
Sbjct: 367 WHRKLGHPNSKVLNEVMKLCNIEASPCENFEFCEACQFGKAHNL 410


>CAN83506.1 hypothetical protein VITISV_027576 [Vitis vinifera]
          Length = 1172

 Score = 62.4 bits (150), Expect(3) = 1e-19
 Identities = 34/92 (36%), Positives = 51/92 (55%)
 Frame = -2

Query: 653 VPINHLCSTTFNSKNKKFHLSQILHVPSALKKLLFVNKFCRDNNIYFKFHLSYFHVKDCV 474
           +PI H  S + ++ N +F L+ +L VP   K L+ ++K    NN+   F  S F VKD  
Sbjct: 270 LPITHTGSLSLHTSNAQFSLTNVLCVPGMKKNLISISKLXISNNVSITFLPSSFLVKDLR 329

Query: 473 SQTTLLNGRTKDELHTLLVEPSFTAFSASRVS 378
           +  TLL G+TKD ++  LV     AFS+ + S
Sbjct: 330 TGATLLKGKTKDGVYEWLVSSPLLAFSSVKTS 361



 Score = 41.2 bits (95), Expect(3) = 1e-19
 Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = -3

Query: 373 DWYRRPGHPHERVLRHIISKHNLGVSSKKGSPV-CMTCHMEKACRLT 236
           +W+ R GHP   +L+H+IS +NL +SS       C TCH  K+ +L+
Sbjct: 364 EWHHRLGHPAFPILKHVISTNNLALSSSSLLHFSCNTCHCNKSHKLS 410



 Score = 40.4 bits (93), Expect(3) = 1e-19
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
 Frame = -1

Query: 207 LELIMCDVWGSAPLTSLHGNKYYVLLL-YFIKF--------CSEVASKFLQFQSMVEHLF 55
           L+++  DVW ++P+ S  G KYYV+ + YF K+         S+V   F++F+++VE  F
Sbjct: 422 LQILYSDVW-TSPIISYDGFKYYVIFVDYFTKYIWFYPLKQISQVKDIFIRFKAIVEKHF 480

Query: 54  NFKIKYFQTDYAKDFSPL 1
           N  I    +D   ++  L
Sbjct: 481 NQNIHTLYSDNGGEYISL 498


>KYP66618.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 660

 Score = 61.2 bits (147), Expect(3) = 2e-19
 Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 9/75 (12%)
 Frame = -1

Query: 207 LELIMCDVWGSAPLTSLHGNKYYVLLL---------YFIKFCSEVASKFLQFQSMVEHLF 55
           L+L+  D+WG +P+ S  G +YY++ L         YF+K+ S+  + FL+F+ M E  F
Sbjct: 325 LQLVYSDIWGPSPIPSKEGYRYYIVFLDAYSKFSWAYFLKYRSQALNSFLEFKKMAELQF 384

Query: 54  NFKIKYFQTDYAKDF 10
             K+K  QTD AK++
Sbjct: 385 QKKLKILQTDAAKEY 399



 Score = 50.1 bits (118), Expect(3) = 2e-19
 Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
 Frame = -2

Query: 653 VPINHLCSTTFN--SKNKKFHLSQILHVPSALKKLLFVNKFCRDNNIYFKFHLSYFHVKD 480
           +PI+++ ++     S N  F L+++LHVP   K LL V +F ++N+ +F+FH +   VK 
Sbjct: 162 LPIHNIGTSKLKNPSNNIAFTLNKLLHVPDITKNLLSVAQFAKENSCFFEFHSTDCFVKS 221

Query: 479 CVSQTTLLNGRTKDELH 429
             S+  LL G+ K+ L+
Sbjct: 222 QGSRKILLQGKLKNGLY 238



 Score = 32.0 bits (71), Expect(3) = 2e-19
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = -3

Query: 370 WYRRPGHPHERVLRHIISKHNLGVSSKKGSPVCMTCHMEK 251
           W+ R GH   ++++H++ + N+ V     + VC +C + K
Sbjct: 269 WHSRLGHCANKIVKHVLKQCNISVPLHDNATVCGSCCLGK 308


>AAT85031.1 putative polyprotein [Oryza sativa Japonica Group] ABF96679.1
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 1437

 Score = 65.1 bits (157), Expect(3) = 3e-19
 Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
 Frame = -1

Query: 216 RFVLELIMCDVWGSAPLTSLHGNKYYVLLL---------YFIKFCSEVASKFLQFQSMVE 64
           ++ LEL+  DVWG AP  S+  NKYYV  +         Y +K+ SEV  KF +FQS+VE
Sbjct: 510 KYPLELVFSDVWGPAP-QSVGNNKYYVSFIDDYSKFTWIYLLKYKSEVFDKFHEFQSLVE 568

Query: 63  HLFNFKIKYFQTDYAKDFSPL 1
            LFN KI   QTD+  ++  L
Sbjct: 569 RLFNRKIVAMQTDWGGEYQKL 589



 Score = 50.4 bits (119), Expect(3) = 3e-19
 Identities = 23/75 (30%), Positives = 40/75 (53%)
 Frame = -2

Query: 647 INHLCSTTFNSKNKKFHLSQILHVPSALKKLLFVNKFCRDNNIYFKFHLSYFHVKDCVSQ 468
           I+H+ ++   + ++  HL  +L+VP A K L+   K   DN  + + +  +F +KD   +
Sbjct: 358 ISHIGNSVVKTPSRNLHLKDVLYVPKANKNLVSAYKLTSDNLAFIELYRKFFFIKDLAMR 417

Query: 467 TTLLNGRTKDELHTL 423
            TLL GR    L+ L
Sbjct: 418 RTLLRGRCHKGLYAL 432



 Score = 27.3 bits (59), Expect(3) = 3e-19
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = -3

Query: 370 WYRRPGHPHERVLRHIISKHNLG-VSSKKGSPVCMTCHMEKACRLT 236
           W+ R GHP   V+  +I   NL  +   +   VC  C   K+ +L+
Sbjct: 456 WHSRLGHPSYTVVEKVIKSQNLPCLDVSEQVSVCDACQKAKSHQLS 501


>KFK45117.1 hypothetical protein AALP_AA1G346500, partial [Arabis alpina]
          Length = 1203

 Score = 58.2 bits (139), Expect(3) = 4e-19
 Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
 Frame = -2

Query: 647 INHLCSTTFNSKNKKFHLSQILHVPSALKKLLFVNKFCRDNNIYFKFHLSYFHVKDCVSQ 468
           I H  S +  S ++   L+ +L VP+  K L+ V + C  NN+  +F  ++F VKD  S 
Sbjct: 376 ITHTGSLSLPSSSRNLALNSVLCVPNIQKNLVSVYRLCNQNNVSVEFFPAHFQVKDLSSG 435

Query: 467 TTLLNGRTKDELHTLLVEPS-FTAFSAS 387
              + G+TKDEL+     PS  T+F AS
Sbjct: 436 VPFIQGKTKDELYEWPASPSTLTSFFAS 463



 Score = 48.5 bits (114), Expect(3) = 4e-19
 Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 9/84 (10%)
 Frame = -1

Query: 225 VLFRFVLELIMCDVWGSAPLTSLHGNKYYVLL---------LYFIKFCSEVASKFLQFQS 73
           ++  + LE +  D+W S+P+ S+   KYY++L         +Y +K  S+V   F+ F++
Sbjct: 522 IVSTYPLEYVFTDLW-SSPVLSIDNYKYYLVLVDHYSRYTWMYPLKLKSQVKETFIAFKA 580

Query: 72  MVEHLFNFKIKYFQTDYAKDFSPL 1
           +VE+ FN KIK   +D   +F  L
Sbjct: 581 LVENRFNTKIKTLYSDNGGEFMAL 604



 Score = 35.8 bits (81), Expect(3) = 4e-19
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = -3

Query: 373 DWYRRPGHPHERVLRHIISKHNLGVSSKKGSPVCMTCHMEKACRL 239
           DW+ R GHP   +L +I+SK +L   S+  + VC  C + K  +L
Sbjct: 472 DWHHRLGHPSTTILHNIVSKFSL-PCSRSVNNVCSDCAINKTHKL 515


>CAN77680.1 hypothetical protein VITISV_040762 [Vitis vinifera]
          Length = 590

 Score = 58.2 bits (139), Expect(3) = 4e-19
 Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
 Frame = -2

Query: 653 VPINHLCSTTFNSKNKKFHLSQILHVPSALKKLLFVNKFCRDNNIYFKFHLSYFHVKDCV 474
           +PI H  S T +  N+KF +   L VP+  K L+ V+ F + NN+  +FH +YF VKD  
Sbjct: 334 LPITHSGSLTLSFPNRKFQVEDTLCVPTINKNLISVHHFTKQNNVILEFHPTYFLVKDRR 393

Query: 473 SQTTLLNGRTKDELHTLLVEPSFT--AFSASRVSV 375
           +   LL G  ++ ++ +   P+ T  AF   R SV
Sbjct: 394 TGEILLQGPCENGVYPMPSSPAATPIAFVHERTSV 428



 Score = 50.8 bits (120), Expect(3) = 4e-19
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 9/77 (11%)
 Frame = -1

Query: 204 ELIMCDVWGSAPLTSLHGNKYYVLLL-YFIKFC--------SEVASKFLQFQSMVEHLFN 52
           +L+  DVWG +P  SL+G++YYV+ + +F K+         S+V + F  F  M+E  FN
Sbjct: 489 DLLYTDVWGPSPTPSLNGHRYYVIFVDHFTKYVWFFPLHQKSDVKTIFPHFYKMIETRFN 548

Query: 51  FKIKYFQTDYAKDFSPL 1
            KIK   +D   +F+ L
Sbjct: 549 IKIKGVYSDNGGEFTAL 565



 Score = 33.5 bits (75), Expect(3) = 4e-19
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = -3

Query: 370 WYRRPGHPHERVLRHIISKHNLGVSS-KKGSPVCMTCHMEKACRL 239
           W++R GHP  +V+  +IS  +L  +S   GS  C +C + KA +L
Sbjct: 431 WHQRLGHPSFKVVTRLISSFSLPTTSCLSGSNNCHSCSINKAHQL 475


>CAN81099.1 hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score = 61.6 bits (148), Expect(3) = 5e-19
 Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
 Frame = -2

Query: 647 INHLCSTTFNS--KNKKFHLSQILHVPSALKKLLFVNKFCRDNNIYFKFHLSYFHVKDCV 474
           I H+  + F S   +K   L+ +LHVPS  K LL V+KF +DN ++F+FH     VKD V
Sbjct: 408 IKHIGQSEFLSPFSSKPLLLNHLLHVPSITKNLLSVSKFAKDNKVFFEFHSDSCFVKDQV 467

Query: 473 SQTTLLNGRTKDELHTLLVEPSFTAFSASRVSVR 372
           +Q  L+ G+ +D L+         AF +S +++R
Sbjct: 468 TQAVLMVGKVRDGLY---------AFDSSHLALR 492



 Score = 45.4 bits (106), Expect(3) = 5e-19
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
 Frame = -1

Query: 207 LELIMCDVWGSAPLTSLHGNKYYVLL---------LYFIKFCSEVASKFLQFQSMVEHLF 55
           LELI  D+WG   + S  G +YY+           ++ ++  SE    F+ F++ VE  F
Sbjct: 580 LELIHLDLWGPTLVLSNSGYRYYIHFVDAFSRFSWIFLLRNKSEAIKTFVNFKTQVELQF 639

Query: 54  NFKIKYFQTDYAKDF 10
           + KIK  QTD+  +F
Sbjct: 640 DLKIKSLQTDWGGEF 654



 Score = 35.0 bits (79), Expect(3) = 5e-19
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -3

Query: 370 WYRRPGHPHERVLRHIISKHNLGVSSKKGSPVCMTCHMEKACR 242
           W++R GHP    +++++SK N+   +K  S  C +C + K  R
Sbjct: 524 WHKRLGHPSAATIKNVLSKCNVAHINKMDSNFCSSCCLGKIHR 566


>KHN21230.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 1429

 Score = 57.0 bits (136), Expect(3) = 1e-18
 Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 9/75 (12%)
 Frame = -1

Query: 207 LELIMCDVWGSAPLTSLHGNKYYV---------LLLYFIKFCSEVASKFLQFQSMVEHLF 55
           LELI CD+WG AP+ S  G KYY+         + +YF+   SE  + F QF+++ E   
Sbjct: 570 LELIYCDLWGPAPMQSSMGYKYYISFIDAFSKYIWVYFLHDKSETLTIFKQFKALAELQL 629

Query: 54  NFKIKYFQTDYAKDF 10
           N KIK  Q+D+  +F
Sbjct: 630 NTKIKAIQSDWGGEF 644



 Score = 53.9 bits (128), Expect(3) = 1e-18
 Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = -2

Query: 599 HLSQILHVPSALKKLLFVNKFCRDNNIYFKFHLSYFHVKDCVSQTTLLNGR-TKDELHTL 423
           HL+ +LHVPS  K L+ V+KF  DNN Y +FH S+F +K   +   LL G+  K  L+ +
Sbjct: 424 HLNNVLHVPSINKNLISVSKFASDNNAYIQFHPSHFVMKSQDNDQILLQGKLDKAGLYPI 483

Query: 422 LVEPSFTAFSASR 384
             + S T+  +SR
Sbjct: 484 HSQSSTTSSLSSR 496



 Score = 29.6 bits (65), Expect(3) = 1e-18
 Identities = 11/44 (25%), Positives = 24/44 (54%)
 Frame = -3

Query: 370 WYRRPGHPHERVLRHIISKHNLGVSSKKGSPVCMTCHMEKACRL 239
           W+ R GH +   + +++   N+   +K  +  C++C + K+ RL
Sbjct: 514 WHHRLGHTNLDTMNNVLKSCNMPTFNKNKTDFCISCCLGKSHRL 557