BLASTX nr result

ID: Panax24_contig00034161 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00034161
         (427 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017255971.1 PREDICTED: uncharacterized protein LOC108225580 [...    59   6e-09
KZN01837.1 hypothetical protein DCAR_010591 [Daucus carota subsp...    55   1e-07
XP_017238304.1 PREDICTED: uncharacterized protein LOC108211262 [...    55   1e-07
XP_004502680.1 PREDICTED: uncharacterized protein LOC101491366 [...    54   5e-07
XP_010662880.1 PREDICTED: uncharacterized protein LOC100852581 [...    54   8e-07
CBI23028.3 unnamed protein product, partial [Vitis vinifera]           54   2e-06
XP_002318436.1 hypothetical protein POPTR_0012s02450g [Populus t...    51   6e-06
XP_019436085.1 PREDICTED: uncharacterized protein LOC109342584 [...    51   8e-06

>XP_017255971.1 PREDICTED: uncharacterized protein LOC108225580 [Daucus carota
           subsp. sativus]
          Length = 81

 Score = 58.9 bits (141), Expect = 6e-09
 Identities = 37/55 (67%), Positives = 40/55 (72%), Gaps = 8/55 (14%)
 Frame = +3

Query: 3   IYLSSGTGES------SMYSLHEDG-VGINSRKLLSHDVVLDYDDAGANTKH-DP 143
           I LS GT ES      S  SLHEDG + +NSR+LLSHDV LDYDDAGANTKH DP
Sbjct: 17  INLSPGTAESFNNGARSTCSLHEDGTIRVNSRRLLSHDV-LDYDDAGANTKHIDP 70


>KZN01837.1 hypothetical protein DCAR_010591 [Daucus carota subsp. sativus]
          Length = 58

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 28/45 (62%), Positives = 34/45 (75%)
 Frame = +3

Query: 9   LSSGTGESSMYSLHEDGVGINSRKLLSHDVVLDYDDAGANTKHDP 143
           +S+G   +SM  LHE    ++SRKLLSHDVVLDY+D GAN KHDP
Sbjct: 5   VSNGMNPASM--LHEGRDKMSSRKLLSHDVVLDYEDPGANPKHDP 47


>XP_017238304.1 PREDICTED: uncharacterized protein LOC108211262 [Daucus carota
           subsp. sativus] KZN00198.1 hypothetical protein
           DCAR_008952 [Daucus carota subsp. sativus]
          Length = 84

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 33/55 (60%), Positives = 38/55 (69%), Gaps = 9/55 (16%)
 Frame = +3

Query: 6   YLSSGT------GESSMYSLHEDG---VGINSRKLLSHDVVLDYDDAGANTKHDP 143
           YLSSGT      G   + SL +DG   V ++SRKLLSHDV  DYD+AGANTKHDP
Sbjct: 19  YLSSGTVDGFSNGAKLINSLRQDGSLRVNLSSRKLLSHDVS-DYDEAGANTKHDP 72


>XP_004502680.1 PREDICTED: uncharacterized protein LOC101491366 [Cicer arietinum]
          Length = 78

 Score = 53.9 bits (128), Expect = 5e-07
 Identities = 27/50 (54%), Positives = 33/50 (66%), Gaps = 7/50 (14%)
 Frame = +3

Query: 9   LSSGTGESSMYSLH-------EDGVGINSRKLLSHDVVLDYDDAGANTKH 137
           LSSG GE    ++H       +DG+ +NSRKL SHD VLDYD+AG N KH
Sbjct: 21  LSSGLGEGFRENIHPTHHFLYKDGIKMNSRKLFSHDFVLDYDEAGPNPKH 70


>XP_010662880.1 PREDICTED: uncharacterized protein LOC100852581 [Vitis vinifera]
          Length = 83

 Score = 53.5 bits (127), Expect = 8e-07
 Identities = 25/40 (62%), Positives = 29/40 (72%)
 Frame = +3

Query: 24  GESSMYSLHEDGVGINSRKLLSHDVVLDYDDAGANTKHDP 143
           G S +Y LH+DG  +NS+KLL  D VLDYD A AN KHDP
Sbjct: 30  GTSPIYLLHKDGTLVNSKKLLKLDAVLDYDYAEANPKHDP 69


>CBI23028.3 unnamed protein product, partial [Vitis vinifera]
          Length = 120

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 25/40 (62%), Positives = 29/40 (72%)
 Frame = +3

Query: 24  GESSMYSLHEDGVGINSRKLLSHDVVLDYDDAGANTKHDP 143
           G S +Y LH+DG  +NS+KLL  D VLDYD A AN KHDP
Sbjct: 30  GTSPIYLLHKDGTLVNSKKLLKLDAVLDYDYAEANPKHDP 69


>XP_002318436.1 hypothetical protein POPTR_0012s02450g [Populus trichocarpa]
           EEE96656.1 hypothetical protein POPTR_0012s02450g
           [Populus trichocarpa]
          Length = 83

 Score = 51.2 bits (121), Expect = 6e-06
 Identities = 25/40 (62%), Positives = 31/40 (77%)
 Frame = +3

Query: 24  GESSMYSLHEDGVGINSRKLLSHDVVLDYDDAGANTKHDP 143
           G +S  SLH+DG+ +N+RKLL  D  LDYDDAGAN +HDP
Sbjct: 33  GMNSYPSLHKDGIQVNTRKLLLVDE-LDYDDAGANRRHDP 71


>XP_019436085.1 PREDICTED: uncharacterized protein LOC109342584 [Lupinus
           angustifolius] OIW15280.1 hypothetical protein
           TanjilG_08077 [Lupinus angustifolius]
          Length = 78

 Score = 50.8 bits (120), Expect = 8e-06
 Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 9/54 (16%)
 Frame = +3

Query: 3   IYLSSGTGESSM---------YSLHEDGVGINSRKLLSHDVVLDYDDAGANTKH 137
           I LSSG  E  M         + L++DG+ +NSRKLL+H+ VLDYD+AG N KH
Sbjct: 17  IPLSSGLAEGCMEDMDPSSTHHLLYKDGMKMNSRKLLNHEFVLDYDEAGPNPKH 70


Top