BLASTX nr result

ID: Panax21_contig00038290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00038290
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF97326.1|AC023628_7 Similar to transcription factor TINY [A...    61   1e-07
ref|NP_563624.1| ethylene-responsive transcription factor ERF023...    61   1e-07
gb|AAM63508.1| transcription factor TINY, putative [Arabidopsis ...    61   1e-07
ref|XP_002301413.1| AP2/ERF domain-containing transcription fact...    60   1e-07
ref|XP_002889375.1| hypothetical protein ARALYDRAFT_470149 [Arab...    60   2e-07

>gb|AAF97326.1|AC023628_7 Similar to transcription factor TINY [Arabidopsis thaliana]
          Length = 187

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
 Frame = +3

Query: 36  ISSAGPAGKHLQCPEKIKINTATKMPPY--VQRGKWEKSVLKIRYTEKVA-VWIGSFPIP 206
           + S G  GK          ++ T+ P Y  V++ +W K V +IR   K + +W+GSFP+P
Sbjct: 20  VKSCGGGGKETS-------SSTTRHPVYHGVRKRRWGKWVSEIREPRKKSRIWLGSFPVP 72

Query: 207 EMTSRAYDVVAFCLKGQ 257
           EM ++AYDV AFCLKG+
Sbjct: 73  EMAAKAYDVAAFCLKGR 89


>ref|NP_563624.1| ethylene-responsive transcription factor ERF023 [Arabidopsis
           thaliana] gi|122225033|sp|Q1ECI2.1|ERF23_ARATH RecName:
           Full=Ethylene-responsive transcription factor ERF023
           gi|107738124|gb|ABF83642.1| At1g01250 [Arabidopsis
           thaliana] gi|332189140|gb|AEE27261.1|
           ethylene-responsive transcription factor ERF023
           [Arabidopsis thaliana]
          Length = 192

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
 Frame = +3

Query: 36  ISSAGPAGKHLQCPEKIKINTATKMPPY--VQRGKWEKSVLKIRYTEKVA-VWIGSFPIP 206
           + S G  GK          ++ T+ P Y  V++ +W K V +IR   K + +W+GSFP+P
Sbjct: 25  VKSCGGGGKETS-------SSTTRHPVYHGVRKRRWGKWVSEIREPRKKSRIWLGSFPVP 77

Query: 207 EMTSRAYDVVAFCLKGQ 257
           EM ++AYDV AFCLKG+
Sbjct: 78  EMAAKAYDVAAFCLKGR 94


>gb|AAM63508.1| transcription factor TINY, putative [Arabidopsis thaliana]
          Length = 187

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
 Frame = +3

Query: 36  ISSAGPAGKHLQCPEKIKINTATKMPPY--VQRGKWEKSVLKIRYTEKVA-VWIGSFPIP 206
           + S G  GK          ++ T+ P Y  V++ +W K V +IR   K + +W+GSFP+P
Sbjct: 20  VKSCGGGGKETS-------SSTTRHPVYHGVRKRRWGKWVSEIREPRKKSRIWLGSFPVP 72

Query: 207 EMTSRAYDVVAFCLKGQ 257
           EM ++AYDV AFCLKG+
Sbjct: 73  EMAAKAYDVAAFCLKGR 89


>ref|XP_002301413.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|118489406|gb|ABK96506.1| unknown
           [Populus trichocarpa x Populus deltoides]
           gi|148372089|gb|ABQ62976.1| TINY-like protein [Populus
           trichocarpa] gi|222843139|gb|EEE80686.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 177

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/67 (44%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
 Frame = +3

Query: 66  LQCPEKIKINTATKMPPY--VQRGKWEKSVLKIRYTEKVA-VWIGSFPIPEMTSRAYDVV 236
           LQ P+  +  + T+ P Y  V++ +W K V +IR   K + +W+GSFP+PEM ++AYDV 
Sbjct: 4   LQIPDTTR-GSGTRHPAYRGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVA 62

Query: 237 AFCLKGQ 257
           A+CLKG+
Sbjct: 63  AYCLKGR 69


>ref|XP_002889375.1| hypothetical protein ARALYDRAFT_470149 [Arabidopsis lyrata subsp.
           lyrata] gi|297335217|gb|EFH65634.1| hypothetical protein
           ARALYDRAFT_470149 [Arabidopsis lyrata subsp. lyrata]
          Length = 186

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/58 (48%), Positives = 42/58 (72%), Gaps = 3/58 (5%)
 Frame = +3

Query: 93  NTATKMPPY--VQRGKWEKSVLKIRYTEKVA-VWIGSFPIPEMTSRAYDVVAFCLKGQ 257
           ++ T+ P Y  V++ +W K V +IR   K + +W+GSFP+PEM ++AYDV AFCLKG+
Sbjct: 31  SSTTRHPVYHGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAFCLKGR 88


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