BLASTX nr result
ID: Panax21_contig00038148
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00038148
(797 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269373.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 132 2e-54
emb|CAN82964.1| hypothetical protein VITISV_000345 [Vitis vinifera] 132 2e-54
emb|CBI16098.3| unnamed protein product [Vitis vinifera] 126 6e-50
emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera] 126 1e-49
ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 126 1e-49
>ref|XP_002269373.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 2 [Vitis
vinifera]
Length = 365
Score = 132 bits (333), Expect(2) = 2e-54
Identities = 59/86 (68%), Positives = 75/86 (87%), Gaps = 3/86 (3%)
Frame = +2
Query: 2 FNRILEHFIQLDINGSS---HPPASKAAIDSLPTIKINFSHVVTDSHCAVFKEPFELNTK 172
F+R+L+ QL+ING+ HPPASKAA++SLPTIKI SHV+++SHCAV KEPFEL+++
Sbjct: 140 FDRLLDQLAQLEINGAGRCEHPPASKAAVESLPTIKIVASHVLSESHCAVCKEPFELDSE 199
Query: 173 AREMPCNHIYHSDCILPWLAIRNSCP 250
ARE+PC HIYHSDCILPWL++RNSCP
Sbjct: 200 ARELPCKHIYHSDCILPWLSLRNSCP 225
Score = 106 bits (265), Expect(2) = 2e-54
Identities = 61/119 (51%), Positives = 74/119 (62%), Gaps = 9/119 (7%)
Frame = +3
Query: 243 LARHELPPDVVD--VEGLL---GQSDEDSMGLTIWRQPGGGYAVGRFTGGGS----ELPV 395
+ RHELP D + G L G ++ED++GLTIWR PGGG+AVGRFTGG ELPV
Sbjct: 226 VCRHELPTDSHEGGSSGHLQSPGLTEEDNVGLTIWRLPGGGFAVGRFTGGRQAAERELPV 285
Query: 396 VYTGMDGAFNVNGGLRRVVWSRSDNRTRGRSGVSHALHNFMSFLERFRISSSRFNMEFG 572
V+T MDG FN +G RR W S R+R G + NF+S RFRISSSR + E G
Sbjct: 286 VFTEMDGGFNPSGASRRNPWVASGIRSREGGGFGRVMRNFLSVFGRFRISSSRSSQETG 344
>emb|CAN82964.1| hypothetical protein VITISV_000345 [Vitis vinifera]
Length = 364
Score = 132 bits (333), Expect(2) = 2e-54
Identities = 59/86 (68%), Positives = 75/86 (87%), Gaps = 3/86 (3%)
Frame = +2
Query: 2 FNRILEHFIQLDINGSS---HPPASKAAIDSLPTIKINFSHVVTDSHCAVFKEPFELNTK 172
F+R+L+ QL+ING+ HPPASKAA++SLPTIKI SHV+++SHCAV KEPFEL+++
Sbjct: 139 FDRLLDQLAQLEINGAGRCEHPPASKAAVESLPTIKIVASHVLSESHCAVCKEPFELDSE 198
Query: 173 AREMPCNHIYHSDCILPWLAIRNSCP 250
ARE+PC HIYHSDCILPWL++RNSCP
Sbjct: 199 ARELPCKHIYHSDCILPWLSLRNSCP 224
Score = 106 bits (265), Expect(2) = 2e-54
Identities = 61/119 (51%), Positives = 74/119 (62%), Gaps = 9/119 (7%)
Frame = +3
Query: 243 LARHELPPDVVD--VEGLL---GQSDEDSMGLTIWRQPGGGYAVGRFTGGGS----ELPV 395
+ RHELP D + G L G ++ED++GLTIWR PGGG+AVGRFTGG ELPV
Sbjct: 225 VCRHELPTDSHEGGSSGHLQSXGLTEEDNVGLTIWRLPGGGFAVGRFTGGRQAAERELPV 284
Query: 396 VYTGMDGAFNVNGGLRRVVWSRSDNRTRGRSGVSHALHNFMSFLERFRISSSRFNMEFG 572
V+T MDG FN +G RR W S R+R G + NF+S RFRISSSR + E G
Sbjct: 285 VFTEMDGGFNPSGASRRNPWVASGIRSREGGGFGRVMRNFLSVFGRFRISSSRSSQETG 343
>emb|CBI16098.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 126 bits (317), Expect(2) = 6e-50
Identities = 56/86 (65%), Positives = 71/86 (82%), Gaps = 3/86 (3%)
Frame = +2
Query: 2 FNRILEHFIQLDING---SSHPPASKAAIDSLPTIKINFSHVVTDSHCAVFKEPFELNTK 172
F+R+LE Q++ING HPPASKAA++S+PTI+I SH+VT+ HCAV KE F+L ++
Sbjct: 257 FDRLLEQLSQIEINGFGRGEHPPASKAAVESMPTIEIVSSHIVTELHCAVCKEAFQLGSE 316
Query: 173 AREMPCNHIYHSDCILPWLAIRNSCP 250
AREMPC HIYHSDCILPWL++RNSCP
Sbjct: 317 AREMPCKHIYHSDCILPWLSLRNSCP 342
Score = 97.8 bits (242), Expect(2) = 6e-50
Identities = 55/108 (50%), Positives = 67/108 (62%), Gaps = 5/108 (4%)
Frame = +3
Query: 243 LARHELPPDVVDVEGLLGQSDEDSMGLTIWRQPGGGYAVGRFTG----GGSELPVVYTGM 410
+ RHELP DV G + ++GLTIWR PGGG+AVGRF+G G ELPVVYT M
Sbjct: 343 VCRHELPTDVP------GTRNSPTVGLTIWRLPGGGFAVGRFSGGRRAGERELPVVYTEM 396
Query: 411 DGAFNVNGGLRRVVWSRSDNRTRGRSG-VSHALHNFMSFLERFRISSS 551
DG FN +G RR+ W+ +R+R G + A N SFL RFR SSS
Sbjct: 397 DGGFNNSGAPRRISWASRRSRSRESGGSLGRAFRNIFSFLGRFRSSSS 444
>emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]
Length = 1218
Score = 126 bits (317), Expect(2) = 1e-49
Identities = 56/86 (65%), Positives = 71/86 (82%), Gaps = 3/86 (3%)
Frame = +2
Query: 2 FNRILEHFIQLDING---SSHPPASKAAIDSLPTIKINFSHVVTDSHCAVFKEPFELNTK 172
F+R+LE Q++ING HPPASKAA++S+PTI+I SH+VT+ HCAV KE F+L ++
Sbjct: 251 FDRLLEQLSQIEINGFGRGEHPPASKAAVESMPTIEIVSSHIVTELHCAVCKEAFQLGSE 310
Query: 173 AREMPCNHIYHSDCILPWLAIRNSCP 250
AREMPC HIYHSDCILPWL++RNSCP
Sbjct: 311 AREMPCKHIYHSDCILPWLSLRNSCP 336
Score = 97.1 bits (240), Expect(2) = 1e-49
Identities = 58/117 (49%), Positives = 71/117 (60%), Gaps = 14/117 (11%)
Frame = +3
Query: 243 LARHELPPDVVD-----VEGLLGQS----DEDSMGLTIWRQPGGGYAVGRFTG----GGS 383
+ RHELP DV V G S +E+++GLTIWR PGGG+AVGRF+G G
Sbjct: 337 VCRHELPTDVPGTRNSPVSGTEALSPAPNEEETVGLTIWRLPGGGFAVGRFSGGRRAGER 396
Query: 384 ELPVVYTGMDGAFNVNGGLRRVVWSRSDNRTRGRSG-VSHALHNFMSFLERFRISSS 551
ELPVVYT MDG FN +G RR+ W+ +R+R G + A N SFL RFR SSS
Sbjct: 397 ELPVVYTEMDGGFNNSGAPRRISWASRRSRSRESGGSLGRAFRNIFSFLGRFRSSSS 453
>ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
Length = 388
Score = 126 bits (317), Expect(2) = 1e-49
Identities = 56/86 (65%), Positives = 71/86 (82%), Gaps = 3/86 (3%)
Frame = +2
Query: 2 FNRILEHFIQLDING---SSHPPASKAAIDSLPTIKINFSHVVTDSHCAVFKEPFELNTK 172
F+R+LE Q++ING HPPASKAA++S+PTI+I SH+VT+ HCAV KE F+L ++
Sbjct: 141 FDRLLEQLSQIEINGFGRGEHPPASKAAVESMPTIEIVSSHIVTELHCAVCKEAFQLGSE 200
Query: 173 AREMPCNHIYHSDCILPWLAIRNSCP 250
AREMPC HIYHSDCILPWL++RNSCP
Sbjct: 201 AREMPCKHIYHSDCILPWLSLRNSCP 226
Score = 96.7 bits (239), Expect(2) = 1e-49
Identities = 57/117 (48%), Positives = 71/117 (60%), Gaps = 14/117 (11%)
Frame = +3
Query: 243 LARHELPPDVVDV--------EGLL-GQSDEDSMGLTIWRQPGGGYAVGRFTG----GGS 383
+ RHELP DV E L ++E+++GLTIWR PGGG+AVGRF+G G
Sbjct: 227 VCRHELPTDVPGTRNSPVSGNEALSPAPNEEETVGLTIWRLPGGGFAVGRFSGGRRAGER 286
Query: 384 ELPVVYTGMDGAFNVNGGLRRVVWSRSDNRTRGRSG-VSHALHNFMSFLERFRISSS 551
ELPVVYT MDG FN +G RR+ W+ +R+R G + A N SFL RFR SSS
Sbjct: 287 ELPVVYTEMDGGFNNSGAPRRISWASRRSRSRESGGSLGRAFRNIFSFLGRFRSSSS 343