BLASTX nr result
ID: Panax21_contig00037953
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00037953 (491 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein lig... 124 6e-27 emb|CBI19874.3| unnamed protein product [Vitis vinifera] 124 6e-27 emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera] 124 6e-27 ref|XP_002300701.1| predicted protein [Populus trichocarpa] gi|2... 112 4e-23 ref|XP_002510542.1| hypothetical protein RCOM_1598060 [Ricinus c... 72 5e-11 >ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis vinifera] Length = 1494 Score = 124 bits (312), Expect = 6e-27 Identities = 69/149 (46%), Positives = 96/149 (64%) Frame = +1 Query: 43 NVFVESKDRAQKIASRSSMRKNKDPAIGSNVLPTKVNSRKHSPKAFTPVDSPKVLTPKSS 222 + +++S+D+ ++ S SSM+ N +G V P K+ S+ S +F+ DSPK + K S Sbjct: 350 SAYMDSEDKTYQVVSHSSMKMNIYKEMGPKVQPPKIRSQLPSSTSFSSTDSPKT-SLKIS 408 Query: 223 SPKPDFYSKKEPSSVLRLLSSRATDSKVSASMPASPFLNQDSGTSSGDSDNEMPELPKSV 402 SPK D + K P+SVLRLLSSRA DS VS S+P SP L +DS SS DSD E+ ELP+S Sbjct: 409 SPKSDSHCHKGPTSVLRLLSSRAMDSTVSTSLPVSPRLYKDSSISSADSDGEVIELPRSC 468 Query: 403 RTTVSHTRSMSYGNVNSQLSEKSFSNDCD 489 R H +S+S+ N+N Q+SE S N+ D Sbjct: 469 RKNHGHNQSISHQNLNRQVSENSSLNEND 497 >emb|CBI19874.3| unnamed protein product [Vitis vinifera] Length = 1510 Score = 124 bits (312), Expect = 6e-27 Identities = 69/149 (46%), Positives = 96/149 (64%) Frame = +1 Query: 43 NVFVESKDRAQKIASRSSMRKNKDPAIGSNVLPTKVNSRKHSPKAFTPVDSPKVLTPKSS 222 + +++S+D+ ++ S SSM+ N +G V P K+ S+ S +F+ DSPK + K S Sbjct: 366 SAYMDSEDKTYQVVSHSSMKMNIYKEMGPKVQPPKIRSQLPSSTSFSSTDSPKT-SLKIS 424 Query: 223 SPKPDFYSKKEPSSVLRLLSSRATDSKVSASMPASPFLNQDSGTSSGDSDNEMPELPKSV 402 SPK D + K P+SVLRLLSSRA DS VS S+P SP L +DS SS DSD E+ ELP+S Sbjct: 425 SPKSDSHCHKGPTSVLRLLSSRAMDSTVSTSLPVSPRLYKDSSISSADSDGEVIELPRSC 484 Query: 403 RTTVSHTRSMSYGNVNSQLSEKSFSNDCD 489 R H +S+S+ N+N Q+SE S N+ D Sbjct: 485 RKNHGHNQSISHQNLNRQVSENSSLNEND 513 >emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera] Length = 1494 Score = 124 bits (312), Expect = 6e-27 Identities = 69/149 (46%), Positives = 96/149 (64%) Frame = +1 Query: 43 NVFVESKDRAQKIASRSSMRKNKDPAIGSNVLPTKVNSRKHSPKAFTPVDSPKVLTPKSS 222 + +++S+D+ ++ S SSM+ N +G V P K+ S+ S +F+ DSPK + K S Sbjct: 350 SAYMDSEDKTYQVVSHSSMKMNIYKEMGPKVQPPKIRSQLPSSTSFSSTDSPKT-SLKIS 408 Query: 223 SPKPDFYSKKEPSSVLRLLSSRATDSKVSASMPASPFLNQDSGTSSGDSDNEMPELPKSV 402 SPK D + K P+SVLRLLSSRA DS VS S+P SP L +DS SS DSD E+ ELP+S Sbjct: 409 SPKSDSHXHKGPTSVLRLLSSRAMDSTVSTSLPVSPRLYKDSSISSADSDGEVIELPRSC 468 Query: 403 RTTVSHTRSMSYGNVNSQLSEKSFSNDCD 489 R H +S+S+ N+N Q+SE S N+ D Sbjct: 469 RKNHGHNQSISHQNLNRQVSENSSLNEND 497 >ref|XP_002300701.1| predicted protein [Populus trichocarpa] gi|222842427|gb|EEE79974.1| predicted protein [Populus trichocarpa] Length = 1518 Score = 112 bits (279), Expect = 4e-23 Identities = 57/143 (39%), Positives = 93/143 (65%) Frame = +1 Query: 43 NVFVESKDRAQKIASRSSMRKNKDPAIGSNVLPTKVNSRKHSPKAFTPVDSPKVLTPKSS 222 + + +S+D+ K+ + S++ ++ IG + P+K S+KHSPK +P+DSP++ +PK Sbjct: 341 DTYFDSEDKNHKLTTLPSIKSTENKDIGVSKRPSKAKSQKHSPKICSPMDSPRI-SPKII 399 Query: 223 SPKPDFYSKKEPSSVLRLLSSRATDSKVSASMPASPFLNQDSGTSSGDSDNEMPELPKSV 402 SP SK+EP ++LR+LS RA DS ++ S+P SP ++++ G+SS DSD E+ L ++V Sbjct: 400 SPNSVVQSKREPKTILRILSCRAMDSAIATSLPDSPCMSKEHGSSSPDSDGEVIGLLRNV 459 Query: 403 RTTVSHTRSMSYGNVNSQLSEKS 471 R TR MS NV+ Q+ E S Sbjct: 460 RKNRDRTRRMSCDNVSGQIFENS 482 >ref|XP_002510542.1| hypothetical protein RCOM_1598060 [Ricinus communis] gi|223551243|gb|EEF52729.1| hypothetical protein RCOM_1598060 [Ricinus communis] Length = 1427 Score = 72.0 bits (175), Expect = 5e-11 Identities = 46/147 (31%), Positives = 80/147 (54%), Gaps = 5/147 (3%) Frame = +1 Query: 52 VESKDRAQKIASRSSMRKNKDPAIGSNVLPTKVNSRKHSPKAFTPVDSPKVLTPKSSSPK 231 ++S+D++ K+ + S + + +G+ + P+K +SR HSP F+ +DSP PK S+ Sbjct: 351 LDSEDKSHKLVTLRSTKMIEIKEMGT-IKPSKSSSRSHSPTIFSSMDSPSTFWPKVSA-N 408 Query: 232 PDFYSKKEPSSVLRLLSSRATDSKVSASMPASPFLNQDSGTSSGDSDNEMPELPKSVRTT 411 D +SK E +S+ R LSS+ DS + S+P SP + D SS DSD ++ P ++ T Sbjct: 409 SDAHSKTESTSLSRHLSSQVMDSTNAPSLPVSPSIINDYSISSRDSDGQLFIDPVTLETG 468 Query: 412 VSHTRS-----MSYGNVNSQLSEKSFS 477 ++ R + GN ++ + S Sbjct: 469 QTYERKAIQEWLKRGNTTCPITRQPLS 495