BLASTX nr result

ID: Panax21_contig00036402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036402
         (934 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAK50799.1| inwardly rectifying potassium channel subunit [D...    82   2e-13
emb|CAA56175.1| K+ channel inward rectifying [Solanum tuberosum]       74   6e-11
ref|XP_002863415.1| hypothetical protein ARALYDRAFT_494350 [Arab...    70   9e-10
emb|CAA63601.1| K+ channel [Arabidopsis thaliana]                      69   2e-09
ref|XP_002870057.1| hypothetical protein ARALYDRAFT_329707 [Arab...    68   3e-09

>emb|CAK50799.1| inwardly rectifying potassium channel subunit [Daucus carota]
          Length = 766

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 38/53 (71%), Positives = 47/53 (88%)
 Frame = -1

Query: 160 MSFSSTKNFLQQFCIDDFQMSTGAQSGFFSSDLLPSLGANINRAIKLRRHIIS 2
           MSF+STKNFL++FC+DDFQ  TGAQS FFS+ LLPSLGANIN+  KL+++IIS
Sbjct: 1   MSFTSTKNFLRRFCVDDFQTRTGAQSSFFSNGLLPSLGANINQGTKLQKNIIS 53


>emb|CAA56175.1| K+ channel inward rectifying [Solanum tuberosum]
          Length = 688

 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 39/54 (72%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
 Frame = -1

Query: 160 MSFSSTKNFLQQFCIDDFQMSTGA-QSGFFSSDLLPSLGANINRAIKLRRHIIS 2
           MSFS  KN LQ+FC+D+FQM T    SGFFSSDLLPSLGA IN A KLRR IIS
Sbjct: 1   MSFSYAKNCLQRFCVDEFQMDTETTHSGFFSSDLLPSLGARINYATKLRRFIIS 54


>ref|XP_002863415.1| hypothetical protein ARALYDRAFT_494350 [Arabidopsis lyrata subsp.
           lyrata] gi|297309250|gb|EFH39674.1| hypothetical protein
           ARALYDRAFT_494350 [Arabidopsis lyrata subsp. lyrata]
          Length = 676

 Score = 69.7 bits (169), Expect = 9e-10
 Identities = 31/53 (58%), Positives = 42/53 (79%)
 Frame = -1

Query: 160 MSFSSTKNFLQQFCIDDFQMSTGAQSGFFSSDLLPSLGANINRAIKLRRHIIS 2
           MS S T+NF Q+FC++++ + T  QS F S+DLLPSLGA IN++ KLR+HIIS
Sbjct: 1   MSISRTRNFFQRFCVEEYNIDTIKQSSFLSADLLPSLGARINQSTKLRKHIIS 53


>emb|CAA63601.1| K+ channel [Arabidopsis thaliana]
          Length = 677

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 30/53 (56%), Positives = 42/53 (79%)
 Frame = -1

Query: 160 MSFSSTKNFLQQFCIDDFQMSTGAQSGFFSSDLLPSLGANINRAIKLRRHIIS 2
           MS S T+NF ++FC++++ + T  QS F S+DLLPSLGA IN++ KLR+HIIS
Sbjct: 1   MSISCTRNFFERFCVEEYNIDTIKQSSFLSADLLPSLGARINQSTKLRKHIIS 53


>ref|XP_002870057.1| hypothetical protein ARALYDRAFT_329707 [Arabidopsis lyrata subsp.
           lyrata] gi|297315893|gb|EFH46316.1| hypothetical protein
           ARALYDRAFT_329707 [Arabidopsis lyrata subsp. lyrata]
          Length = 701

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 30/53 (56%), Positives = 41/53 (77%)
 Frame = -1

Query: 160 MSFSSTKNFLQQFCIDDFQMSTGAQSGFFSSDLLPSLGANINRAIKLRRHIIS 2
           M  SST+NF ++FC++++ M T   S F S+DLLPSLGA IN++ KLR+HIIS
Sbjct: 1   MPISSTRNFFKRFCVEEYNMDTFKHSSFLSADLLPSLGARINQSTKLRKHIIS 53


Top