BLASTX nr result

ID: Panax21_contig00036302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036302
         (911 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18266.3| unnamed protein product [Vitis vinifera]              290   4e-76
ref|XP_003634544.1| PREDICTED: uncharacterized protein LOC100254...   256   5e-66
gb|AFL55357.1| Fanconia anemia complementation group M-like prot...   230   4e-58
ref|NP_001185141.1| fanconi anemia group M protein [Arabidopsis ...   230   4e-58
ref|XP_002526811.1| protein with unknown function [Ricinus commu...   219   7e-55

>emb|CBI18266.3| unnamed protein product [Vitis vinifera]
          Length = 1448

 Score =  290 bits (741), Expect = 4e-76
 Identities = 158/313 (50%), Positives = 195/313 (62%), Gaps = 53/313 (16%)
 Frame = -3

Query: 873  ACEGSELKGYMRKQANSKAIKKHMRNGGITSFNFHSSPRMIPHIFKPEVQFVKLSIEQFV 694
            ACEGSE+KGYMRKQANSK ++KHMRNGG+ SFNFHSSPRMIPHIFKPEVQFV+LSIEQFV
Sbjct: 649  ACEGSEMKGYMRKQANSKTVRKHMRNGGMNSFNFHSSPRMIPHIFKPEVQFVELSIEQFV 708

Query: 693  PRGKKMLEDHNVQTPEFETKLTNAESDILRKYFQPTTENLFRPSLIAFPHFQAFPSGVHK 514
            PRG+K  +DH +Q P    KLTN E+++L KYF  T +  +RPSLIAFP FQAFP+GVHK
Sbjct: 709  PRGRKGKDDHPIQAPISTDKLTNVETEVLAKYFGTTGKITWRPSLIAFPPFQAFPTGVHK 768

Query: 513  IMHSFRSVMLIDTMQRMQGLSYSRDKKAFCIEDKGAS---------DLCSSVETVEHHDS 361
            I HSFR+ +LID MQ +QGLS+S + K F +E + ++         +    +ETVE H+ 
Sbjct: 769  IPHSFRTEILIDMMQHLQGLSFSGNSKTFFVEGEVSTNEHLGVETVEQYDKIETVEQHEE 828

Query: 360  STK--------------------------------------------DLQTFHNSPEVNS 313
            S K                                            D   F +SP+   
Sbjct: 829  SRKGNRNFNDSNGLCNRTCSLTYQKKKKKLIFKFNHLCDVKFQHAVPDSIIFGDSPKAQP 888

Query: 312  KREVSESHLSPMYAYRTEEKQCLPEFQPQSPSVHSYLFGSDFVSVDDLGKVLVMSVPLLP 133
             RE+S S  SP+   +T+EK  +   Q  +P VHSYLFGSDFVSVD LG VL++SVPL+P
Sbjct: 889  IRELSYSEESPIRNTKTKEKHSMSSSQGNNPHVHSYLFGSDFVSVDTLGNVLILSVPLIP 948

Query: 132  LKEVFRSKCTTAS 94
             KEV  SKC   S
Sbjct: 949  SKEVSHSKCARQS 961


>ref|XP_003634544.1| PREDICTED: uncharacterized protein LOC100254868 [Vitis vinifera]
          Length = 982

 Score =  256 bits (654), Expect = 5e-66
 Identities = 142/293 (48%), Positives = 180/293 (61%), Gaps = 42/293 (14%)
 Frame = -3

Query: 756  MIPHIFKPEVQFVKLSIEQFVPRGKKMLEDHNVQTPEFETKLTNAESDILRKYFQPTTEN 577
            +IPHIFKPEVQFV+LSIEQFVPRG+K  +DH +Q P    KLTN E+++L KYF  T + 
Sbjct: 316  LIPHIFKPEVQFVELSIEQFVPRGRKGKDDHPIQAPISTDKLTNVETEVLAKYFGTTGKI 375

Query: 576  LFRPSLIAFPHFQAFPSGVHKIMHSFRSVMLIDTMQRMQGLSYSRDKKAFCIE------- 418
             +RPSLIAFP FQAFP+GVHKI HSFR+ +LID MQ +QGLS+S + K F +E       
Sbjct: 376  TWRPSLIAFPPFQAFPTGVHKIPHSFRTEILIDMMQHLQGLSFSGNSKTFFVEGEVSTNE 435

Query: 417  -----------------------------------DKGASDLCSSVETVEHHDSSTKDLQ 343
                                               D+ + D   +VETVE H+ S KD  
Sbjct: 436  HLGVETVEQYDKSRMGNITFNNSNGLCNKPCVFRKDEASMDEHLAVETVEQHEESRKDSI 495

Query: 342  TFHNSPEVNSKREVSESHLSPMYAYRTEEKQCLPEFQPQSPSVHSYLFGSDFVSVDDLGK 163
             F +SP+    RE+S S  SP+   +T+EK  +   Q  +P VHSYLFGSDFVSVD LG 
Sbjct: 496  IFGDSPKAQPIRELSYSEESPIRNTKTKEKHSMSSSQGNNPHVHSYLFGSDFVSVDTLGN 555

Query: 162  VLVMSVPLLPLKEVFRSKCTTASSVDLLNCSKQDAFHFGSSLAEYKEDPMQVK 4
            VL++SVPL+P KEV  SKC +ASS  LLNC KQD+ H G+S  ++K   M+ K
Sbjct: 556  VLILSVPLIPSKEVSHSKCASASSSMLLNCLKQDSCHSGTSQGQHKGQSMEEK 608


>gb|AFL55357.1| Fanconia anemia complementation group M-like protein [Arabidopsis
            thaliana]
          Length = 1344

 Score =  230 bits (586), Expect = 4e-58
 Identities = 129/277 (46%), Positives = 167/277 (60%), Gaps = 12/277 (4%)
 Frame = -3

Query: 873  ACEGSELKGYMRKQANSKAIKKHMRNGGITSFNFHSSPRMIPHIFKPEVQFVKLSIEQFV 694
            ACEGSE   YMRKQA+ +AIKKHMRNGG  SFNFH SPRMIPH++KPEVQ V+ SI+QFV
Sbjct: 582  ACEGSEKNSYMRKQASGRAIKKHMRNGGTNSFNFHPSPRMIPHVYKPEVQHVEFSIKQFV 641

Query: 693  PRGKKMLEDHNVQTPEFETKLTNAESDILRKYFQPTTENLFRPSLIAFPHFQAFPSGVHK 514
            PRGKK+ E++  +TP F+ KLT AE+ +L KY+    E   R SLIAFPHFQ  PS VHK
Sbjct: 642  PRGKKLQEEYATETPAFQKKLTPAETHMLAKYYNNPDEEKLRVSLIAFPHFQTLPSKVHK 701

Query: 513  IMHSFRSVMLIDTMQRMQGLSYSRDKKAFCIEDKGASDLCSSVETVEHHDSSTKDLQTFH 334
            +MHS ++ MLID MQ +Q  ++S   K+F  E +        ++T     +  KDL +  
Sbjct: 702  VMHSRQTGMLIDAMQHLQEPTFSEQSKSFFTEFRAPLGEREELDTGLRVTNDPKDLHSVR 761

Query: 333  NSPEVNSKREVSESHLSPMYAYRTEEKQCLPEFQPQSPSVHSYLFGSDFVSVDDLGKVLV 154
            +  EVN+ +  ++   SP     T EK    +++  SP+ H YLF S+  SVD LG V V
Sbjct: 762  DL-EVNTSQRKAKQVESPTSTLETTEK----DYEESSPT-HRYLFSSECASVDTLGNVFV 815

Query: 153  MSVPLLPLKEVFRS------------KCTTASSVDLL 79
            M VPLL    V  S             C   S +DL+
Sbjct: 816  MPVPLLFFPNVLESDNTPLPKTEKQHSCRNTSHIDLV 852


>ref|NP_001185141.1| fanconi anemia group M protein [Arabidopsis thaliana]
            gi|332193686|gb|AEE31807.1| fanconi anemia group M
            protein [Arabidopsis thaliana]
          Length = 1390

 Score =  230 bits (586), Expect = 4e-58
 Identities = 129/277 (46%), Positives = 167/277 (60%), Gaps = 12/277 (4%)
 Frame = -3

Query: 873  ACEGSELKGYMRKQANSKAIKKHMRNGGITSFNFHSSPRMIPHIFKPEVQFVKLSIEQFV 694
            ACEGSE   YMRKQA+ +AIKKHMRNGG  SFNFH SPRMIPH++KPEVQ V+ SI+QFV
Sbjct: 581  ACEGSEKNSYMRKQASGRAIKKHMRNGGTNSFNFHPSPRMIPHVYKPEVQHVEFSIKQFV 640

Query: 693  PRGKKMLEDHNVQTPEFETKLTNAESDILRKYFQPTTENLFRPSLIAFPHFQAFPSGVHK 514
            PRGKK+ E++  +TP F+ KLT AE+ +L KY+    E   R SLIAFPHFQ  PS VHK
Sbjct: 641  PRGKKLQEEYATETPAFQKKLTPAETHMLAKYYNNPDEEKLRVSLIAFPHFQTLPSKVHK 700

Query: 513  IMHSFRSVMLIDTMQRMQGLSYSRDKKAFCIEDKGASDLCSSVETVEHHDSSTKDLQTFH 334
            +MHS ++ MLID MQ +Q  ++S   K+F  E +        ++T     +  KDL +  
Sbjct: 701  VMHSRQTGMLIDAMQHLQEPTFSEQSKSFFTEFRAPLGEREELDTGLRVTNDPKDLHSVR 760

Query: 333  NSPEVNSKREVSESHLSPMYAYRTEEKQCLPEFQPQSPSVHSYLFGSDFVSVDDLGKVLV 154
            +  EVN+ +  ++   SP     T EK    +++  SP+ H YLF S+  SVD LG V V
Sbjct: 761  DL-EVNTSQRKAKQVESPTSTLETTEK----DYEESSPT-HRYLFSSECASVDTLGNVFV 814

Query: 153  MSVPLLPLKEVFRS------------KCTTASSVDLL 79
            M VPLL    V  S             C   S +DL+
Sbjct: 815  MPVPLLFFPNVLESDNTPLPKTEKQHSCRNTSHIDLV 851


>ref|XP_002526811.1| protein with unknown function [Ricinus communis]
            gi|223533815|gb|EEF35546.1| protein with unknown function
            [Ricinus communis]
          Length = 1351

 Score =  219 bits (558), Expect = 7e-55
 Identities = 112/221 (50%), Positives = 155/221 (70%)
 Frame = -3

Query: 753  IPHIFKPEVQFVKLSIEQFVPRGKKMLEDHNVQTPEFETKLTNAESDILRKYFQPTTENL 574
            IPH+ KPEVQFVKLSIEQ++PRGKK+ +D+ ++TP FE+KL  AE+ ++ KYF PT+E  
Sbjct: 573  IPHVLKPEVQFVKLSIEQYIPRGKKLKDDNAIRTPVFESKLNVAEASLIAKYFHPTSEKS 632

Query: 573  FRPSLIAFPHFQAFPSGVHKIMHSFRSVMLIDTMQRMQGLSYSRDKKAFCIEDKGASDLC 394
            +RPSLIAFPHFQAFPS VHK+MHS R+ MLIDTMQ +Q L +SR++    IED+ AS  C
Sbjct: 633  WRPSLIAFPHFQAFPSRVHKVMHSCRTDMLIDTMQCLQNLLFSRERGDLIIEDEIASGKC 692

Query: 393  SSVETVEHHDSSTKDLQTFHNSPEVNSKREVSESHLSPMYAYRTEEKQCLPEFQPQSPSV 214
                     +++ +D   + +SP    + +V +S +SP+   R+E+   L +   QS   
Sbjct: 693  LG---DNKENNNKEDPHLWVDSPSTKPQEKVEDSEVSPLKTPRSEKHNVL-DLHGQSSPA 748

Query: 213  HSYLFGSDFVSVDDLGKVLVMSVPLLPLKEVFRSKCTTASS 91
            H+YLF SDFVSVD LGKV+++SVP++PLKE    K T+ S+
Sbjct: 749  HAYLFSSDFVSVDALGKVIILSVPVVPLKEAIHCKFTSPST 789


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