BLASTX nr result

ID: Panax21_contig00036135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036135
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141232.1| PREDICTED: WD repeat-containing protein 44-l...   207   6e-52
ref|XP_002282052.1| PREDICTED: WD repeat-containing protein 44-l...   207   6e-52
ref|XP_003539589.1| PREDICTED: WD repeat-containing protein 44-l...   197   1e-48
ref|XP_002534244.1| WD-repeat protein, putative [Ricinus communi...   196   2e-48
ref|XP_002329147.1| predicted protein [Populus trichocarpa] gi|2...   195   4e-48

>ref|XP_004141232.1| PREDICTED: WD repeat-containing protein 44-like [Cucumis sativus]
            gi|449498657|ref|XP_004160597.1| PREDICTED: WD
            repeat-containing protein 44-like [Cucumis sativus]
          Length = 918

 Score =  207 bits (528), Expect = 6e-52
 Identities = 98/134 (73%), Positives = 110/134 (82%), Gaps = 1/134 (0%)
 Frame = -3

Query: 400  TVTRSYEHFHCQDVSAAIPWPGMGDTWGLQDSCSGEANGFNDQLDEVSTANHPPTPVEET 221
            TV RSYEHFHCQDVS AIPWPGMGDTWGL D   G+ N   + +DEVS+ANHPP+PVE  
Sbjct: 765  TVVRSYEHFHCQDVSVAIPWPGMGDTWGLNDDYCGDDNVIENHIDEVSSANHPPSPVEAE 824

Query: 220  NGSETSPLASGCTSSPLHGTISSATNSYFFDRISATWPEEKLLLATK-NRSPHVRVDFSD 44
            NGSE S LASGCT+SPLHGT+SSATNSYFFDRISATWPEEKL+L T+ NRSPH  +D + 
Sbjct: 825  NGSEDSVLASGCTNSPLHGTLSSATNSYFFDRISATWPEEKLILNTRNNRSPHSSMDIAS 884

Query: 43   GVNQRRSAWGMVIV 2
            G+ Q  SAWGMVIV
Sbjct: 885  GMFQGSSAWGMVIV 898


>ref|XP_002282052.1| PREDICTED: WD repeat-containing protein 44-like [Vitis vinifera]
          Length = 880

 Score =  207 bits (528), Expect = 6e-52
 Identities = 103/132 (78%), Positives = 106/132 (80%)
 Frame = -3

Query: 397  VTRSYEHFHCQDVSAAIPWPGMGDTWGLQDSCSGEANGFNDQLDEVSTANHPPTPVEETN 218
            VTRSYEHFH QDVS AIPWPGMGDTW LQDS SGE  G    LDEVSTANHPPTPVE  N
Sbjct: 734  VTRSYEHFHSQDVSVAIPWPGMGDTWELQDSFSGEQIGLGSHLDEVSTANHPPTPVEYIN 793

Query: 217  GSETSPLASGCTSSPLHGTISSATNSYFFDRISATWPEEKLLLATKNRSPHVRVDFSDGV 38
            G E SP  S CTSSPL+GTISSATN YFFDRISATWPEEKLLLATKN SPH  VDF++G 
Sbjct: 794  GDEGSPSVSVCTSSPLNGTISSATNGYFFDRISATWPEEKLLLATKNTSPHASVDFANG- 852

Query: 37   NQRRSAWGMVIV 2
                SAWGMVIV
Sbjct: 853  ----SAWGMVIV 860


>ref|XP_003539589.1| PREDICTED: WD repeat-containing protein 44-like [Glycine max]
          Length = 766

 Score =  197 bits (500), Expect = 1e-48
 Identities = 93/133 (69%), Positives = 110/133 (82%)
 Frame = -3

Query: 400  TVTRSYEHFHCQDVSAAIPWPGMGDTWGLQDSCSGEANGFNDQLDEVSTANHPPTPVEET 221
            TVTRSYEHFHC+DVS AIPWPGMGD W +QD+ SGE    ++  DEVS+ANHPPTPVEE 
Sbjct: 614  TVTRSYEHFHCKDVSVAIPWPGMGDEWDMQDTFSGEQPEIDNHADEVSSANHPPTPVEEN 673

Query: 220  NGSETSPLASGCTSSPLHGTISSATNSYFFDRISATWPEEKLLLATKNRSPHVRVDFSDG 41
              +E S  ASG ++SP H TI+SATNSYFFDRISATWPEEKLLLAT+ +SP V +DFS+G
Sbjct: 674  FVTEGSRSASGYSNSPRHATIASATNSYFFDRISATWPEEKLLLATRTQSPRVSMDFSNG 733

Query: 40   VNQRRSAWGMVIV 2
            V+++ SAWGMVIV
Sbjct: 734  VSKKMSAWGMVIV 746


>ref|XP_002534244.1| WD-repeat protein, putative [Ricinus communis]
            gi|223525645|gb|EEF28134.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 944

 Score =  196 bits (498), Expect = 2e-48
 Identities = 92/133 (69%), Positives = 105/133 (78%)
 Frame = -3

Query: 400  TVTRSYEHFHCQDVSAAIPWPGMGDTWGLQDSCSGEANGFNDQLDEVSTANHPPTPVEET 221
            T+TRSYEHFHCQDVS AIPWPGMGD WGLQD+  GE NG ++ LDEVS ANHPPTPVEE 
Sbjct: 792  TITRSYEHFHCQDVSVAIPWPGMGDIWGLQDTLPGEQNGLDNHLDEVSIANHPPTPVEEI 851

Query: 220  NGSETSPLASGCTSSPLHGTISSATNSYFFDRISATWPEEKLLLATKNRSPHVRVDFSDG 41
            + +  S   SGCT+SPL+G I SATN YFFDRISATWPEEKL LAT+  SP   VD + G
Sbjct: 852  SSNNGSQSLSGCTNSPLNGIICSATNGYFFDRISATWPEEKLNLATRTWSPRSSVDIASG 911

Query: 40   VNQRRSAWGMVIV 2
            ++Q  SA+GMVIV
Sbjct: 912  MSQNMSAYGMVIV 924


>ref|XP_002329147.1| predicted protein [Populus trichocarpa] gi|222869816|gb|EEF06947.1|
            predicted protein [Populus trichocarpa]
          Length = 799

 Score =  195 bits (495), Expect = 4e-48
 Identities = 94/133 (70%), Positives = 107/133 (80%)
 Frame = -3

Query: 400  TVTRSYEHFHCQDVSAAIPWPGMGDTWGLQDSCSGEANGFNDQLDEVSTANHPPTPVEET 221
            TVT SYEHFHCQD S AIPWPGMGDTW LQD+ SGE +G ++ LDEVS  NHPPTPVEE 
Sbjct: 648  TVTSSYEHFHCQDASVAIPWPGMGDTWELQDTLSGEQSGLDNHLDEVSIVNHPPTPVEEA 707

Query: 220  NGSETSPLASGCTSSPLHGTISSATNSYFFDRISATWPEEKLLLATKNRSPHVRVDFSDG 41
            +  E S   SGCT+SPL+G ISSATN YFFDRISATWPEEKL LAT+ RSPH  VD S+G
Sbjct: 708  S-IEGSQSLSGCTNSPLNGIISSATNGYFFDRISATWPEEKLNLATRTRSPHASVDISNG 766

Query: 40   VNQRRSAWGMVIV 2
            +++  SA+GMVIV
Sbjct: 767  LSESVSAYGMVIV 779


Top