BLASTX nr result

ID: Panax21_contig00036115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036115
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37573.3| unnamed protein product [Vitis vinifera]              194   6e-48
ref|XP_002275497.1| PREDICTED: WD repeat-containing protein 44-l...   194   6e-48
ref|XP_002517227.1| WD-repeat protein, putative [Ricinus communi...   190   9e-47
ref|XP_002328477.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
ref|XP_002309892.1| predicted protein [Populus trichocarpa] gi|2...   184   9e-45

>emb|CBI37573.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score =  194 bits (493), Expect = 6e-48
 Identities = 94/123 (76%), Positives = 107/123 (86%), Gaps = 1/123 (0%)
 Frame = +1

Query: 10  DAEIHIRGKKKYSGNRITGIQFSQEDSQKVMITSEDSKIRIFDGIDVVHKYRGLSKSGSQ 189
           DA+++  G+KK SGN+ITGIQFSQE+SQKVMITSEDSK+RI DGIDVV+KY+GL KSGSQ
Sbjct: 431 DAKVNFHGRKKTSGNKITGIQFSQEESQKVMITSEDSKLRILDGIDVVYKYKGLRKSGSQ 490

Query: 190 MSASFTSTGRHIISVGEDSHIYVWNYDDLC-VPSKQTKSVRSCEHFFHEGVSVAIPWSGR 366
           MSASFTSTGRHI+SVGEDS +YVWNYD  C   SKQ KSV+SCEHFF EGVSVAIPWS  
Sbjct: 491 MSASFTSTGRHIVSVGEDSRVYVWNYDGFCSQSSKQMKSVQSCEHFFFEGVSVAIPWSDT 550

Query: 367 GTD 375
           G +
Sbjct: 551 GAE 553


>ref|XP_002275497.1| PREDICTED: WD repeat-containing protein 44-like [Vitis vinifera]
          Length = 674

 Score =  194 bits (493), Expect = 6e-48
 Identities = 94/123 (76%), Positives = 107/123 (86%), Gaps = 1/123 (0%)
 Frame = +1

Query: 10  DAEIHIRGKKKYSGNRITGIQFSQEDSQKVMITSEDSKIRIFDGIDVVHKYRGLSKSGSQ 189
           DA+++  G+KK SGN+ITGIQFSQE+SQKVMITSEDSK+RI DGIDVV+KY+GL KSGSQ
Sbjct: 437 DAKVNFHGRKKTSGNKITGIQFSQEESQKVMITSEDSKLRILDGIDVVYKYKGLRKSGSQ 496

Query: 190 MSASFTSTGRHIISVGEDSHIYVWNYDDLC-VPSKQTKSVRSCEHFFHEGVSVAIPWSGR 366
           MSASFTSTGRHI+SVGEDS +YVWNYD  C   SKQ KSV+SCEHFF EGVSVAIPWS  
Sbjct: 497 MSASFTSTGRHIVSVGEDSRVYVWNYDGFCSQSSKQMKSVQSCEHFFFEGVSVAIPWSDT 556

Query: 367 GTD 375
           G +
Sbjct: 557 GAE 559


>ref|XP_002517227.1| WD-repeat protein, putative [Ricinus communis]
           gi|223543598|gb|EEF45127.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 654

 Score =  190 bits (483), Expect = 9e-47
 Identities = 88/118 (74%), Positives = 105/118 (88%), Gaps = 1/118 (0%)
 Frame = +1

Query: 13  AEIHIRGKKKYSGNRITGIQFSQEDSQKVMITSEDSKIRIFDGIDVVHKYRGLSKSGSQM 192
           AEIH++G+K+ +GNRITGIQFSQE  Q+VMI+SEDSK+RI DG+D+VHKY+GL KSGSQM
Sbjct: 419 AEIHVQGRKRTAGNRITGIQFSQERPQRVMISSEDSKLRILDGVDIVHKYKGLPKSGSQM 478

Query: 193 SASFTSTGRHIISVGEDSHIYVWNYDDLCVP-SKQTKSVRSCEHFFHEGVSVAIPWSG 363
           SASFTS G+HIISVGED  +YVW+YD+LC P SK  KSVRSCEHFF EGVS+A+PWSG
Sbjct: 479 SASFTSGGKHIISVGEDCRVYVWDYDELCTPSSKHKKSVRSCEHFFSEGVSIAVPWSG 536


>ref|XP_002328477.1| predicted protein [Populus trichocarpa] gi|222838192|gb|EEE76557.1|
           predicted protein [Populus trichocarpa]
          Length = 655

 Score =  186 bits (471), Expect = 2e-45
 Identities = 87/123 (70%), Positives = 105/123 (85%), Gaps = 1/123 (0%)
 Frame = +1

Query: 10  DAEIHIRGKKKYSGNRITGIQFSQEDSQKVMITSEDSKIRIFDGIDVVHKYRGLSKSGSQ 189
           +AE+HI+G+++ SGNRIT IQFSQE   +VMITSEDSK+R+FDG+D+V+K++GL KSGSQ
Sbjct: 421 EAEVHIQGRRRTSGNRITSIQFSQEICPRVMITSEDSKVRVFDGVDIVNKFKGLPKSGSQ 480

Query: 190 MSASFTSTGRHIISVGEDSHIYVWNYDDLCVP-SKQTKSVRSCEHFFHEGVSVAIPWSGR 366
           MSASFTS GRHIISVGED  +YVWNYD LC   SK  KSV+SCE FF EGVSVA+PWSG 
Sbjct: 481 MSASFTSNGRHIISVGEDCRVYVWNYDGLCTSWSKHIKSVKSCEFFFSEGVSVAVPWSGT 540

Query: 367 GTD 375
           GT+
Sbjct: 541 GTE 543


>ref|XP_002309892.1| predicted protein [Populus trichocarpa] gi|222852795|gb|EEE90342.1|
           predicted protein [Populus trichocarpa]
          Length = 550

 Score =  184 bits (466), Expect = 9e-45
 Identities = 90/123 (73%), Positives = 105/123 (85%), Gaps = 1/123 (0%)
 Frame = +1

Query: 10  DAEIHIRGKKKYSGNRITGIQFSQEDSQKVMITSEDSKIRIFDGIDVVHKYRGLSKSGSQ 189
           +AEIHI+G+ + SGNRITGIQ   E   +VMITSEDSK+R+FDG+DVV+K++GL KSGSQ
Sbjct: 373 EAEIHIQGRNRNSGNRITGIQ---EICPRVMITSEDSKVRVFDGVDVVNKFKGLPKSGSQ 429

Query: 190 MSASFTSTGRHIISVGEDSHIYVWNYDDLCVP-SKQTKSVRSCEHFFHEGVSVAIPWSGR 366
           MSASFTS GRHIISVGED  +YVWNYD LC P SK TKSVRSCE+FF EGVSVA+PWSG 
Sbjct: 430 MSASFTSKGRHIISVGEDCRVYVWNYDGLCTPWSKHTKSVRSCEYFFSEGVSVAVPWSGP 489

Query: 367 GTD 375
           GT+
Sbjct: 490 GTE 492


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