BLASTX nr result

ID: Panax21_contig00036056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036056
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277430.1| PREDICTED: pentatricopeptide repeat-containi...   103   1e-20
emb|CAN64718.1| hypothetical protein VITISV_026719 [Vitis vinifera]   102   3e-20
ref|XP_002327523.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
emb|CBI36352.3| unnamed protein product [Vitis vinifera]               74   9e-12
ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat...    74   9e-12

>ref|XP_002277430.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 500

 Score =  103 bits (257), Expect = 1e-20
 Identities = 46/75 (61%), Positives = 57/75 (76%)
 Frame = +2

Query: 149 NGALYMALIGLYNDVGKWSKVAKVKGEMKDIGSRKTPGCSLIEVNGISHEFVVGDQCHPC 328
           NGALYM L+ LY + G+W +V KVK +MK++G RK PGCSLIEV GI +EFVVGD+ HPC
Sbjct: 423 NGALYMTLLSLYREAGRWDEVEKVKLKMKEVGCRKGPGCSLIEVGGICYEFVVGDKSHPC 482

Query: 329 TLEVSLNLGNVILEF 373
            +E+ LNL   I EF
Sbjct: 483 AVEICLNLSKAIREF 497


>emb|CAN64718.1| hypothetical protein VITISV_026719 [Vitis vinifera]
          Length = 499

 Score =  102 bits (254), Expect = 3e-20
 Identities = 45/75 (60%), Positives = 57/75 (76%)
 Frame = +2

Query: 149 NGALYMALIGLYNDVGKWSKVAKVKGEMKDIGSRKTPGCSLIEVNGISHEFVVGDQCHPC 328
           NGALYM L+ LY + G+W +V KVK +MK++G RK PGCSLIEV GI +EFVVGD+ HPC
Sbjct: 422 NGALYMTLLSLYREAGRWDEVEKVKLKMKEVGCRKGPGCSLIEVGGICYEFVVGDKSHPC 481

Query: 329 TLEVSLNLGNVILEF 373
            +E+ LNL    +EF
Sbjct: 482 AVEICLNLSKANMEF 496


>ref|XP_002327523.1| predicted protein [Populus trichocarpa] gi|222836077|gb|EEE74498.1|
           predicted protein [Populus trichocarpa]
          Length = 635

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/64 (53%), Positives = 44/64 (68%)
 Frame = +2

Query: 149 NGALYMALIGLYNDVGKWSKVAKVKGEMKDIGSRKTPGCSLIEVNGISHEFVVGDQCHPC 328
           NGA+Y+    +Y    KW K+ +++  M D G +KTPGCSLIE+NGI HEFV GDQ HP 
Sbjct: 465 NGAVYVLQCNIYAACNKWDKLRELRQVMMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQ 524

Query: 329 TLEV 340
           T E+
Sbjct: 525 TKEI 528


>emb|CBI36352.3| unnamed protein product [Vitis vinifera]
          Length = 605

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 34/75 (45%), Positives = 49/75 (65%)
 Frame = +2

Query: 146 KNGALYMALIGLYNDVGKWSKVAKVKGEMKDIGSRKTPGCSLIEVNGISHEFVVGDQCHP 325
           +NGA+Y+ L  +Y    +W K+ +V+  M D G +KTPGCSLIE+NG  HEFV GDQ HP
Sbjct: 434 ENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHP 493

Query: 326 CTLEVSLNLGNVILE 370
            + E+   L  + ++
Sbjct: 494 QSKEIYSKLDEMSVD 508


>ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 34/75 (45%), Positives = 49/75 (65%)
 Frame = +2

Query: 146 KNGALYMALIGLYNDVGKWSKVAKVKGEMKDIGSRKTPGCSLIEVNGISHEFVVGDQCHP 325
           +NGA+Y+ L  +Y    +W K+ +V+  M D G +KTPGCSLIE+NG  HEFV GDQ HP
Sbjct: 553 ENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHP 612

Query: 326 CTLEVSLNLGNVILE 370
            + E+   L  + ++
Sbjct: 613 QSKEIYSKLDEMSVD 627


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