BLASTX nr result

ID: Panax21_contig00036026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036026
         (825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272334.1| PREDICTED: scarecrow-like transcription fact...   156   6e-36
ref|XP_002274103.1| PREDICTED: scarecrow-like transcription fact...   153   5e-35
ref|XP_003617966.1| Chitin-inducible gibberellin-responsive prot...   147   2e-33
ref|XP_002321179.1| GRAS family transcription factor [Populus tr...   143   5e-32
ref|XP_002533870.1| Chitin-inducible gibberellin-responsive prot...   142   7e-32

>ref|XP_002272334.1| PREDICTED: scarecrow-like transcription factor PAT1-like [Vitis
           vinifera]
          Length = 545

 Score =  156 bits (394), Expect = 6e-36
 Identities = 87/174 (50%), Positives = 111/174 (63%), Gaps = 1/174 (0%)
 Frame = -3

Query: 520 EHDFFHQTSRFYNQPIQDFESYFRNPIENLDNRLCSDDGGQGMQFSVQ-VSEHYCTLASS 344
           +H     ++R Y  P Q+ E++     ++ D++LC +DG QG  FS Q  SE YCTL SS
Sbjct: 6   QHRSSGMSNRLYYLPPQEAEAHCLPQFQSFDHQLCYNDGSQGTNFSFQGSSERYCTLESS 65

Query: 343 TATGDYPGNSSPSTVSFSANGSPISPPDSQTYLSGTHHSPGNTYNSQVSGSCYINDVNNL 164
           +ATG Y   +SPSTVSFS NGSP S  DSQ+Y S  HHSP NTY S +S SC  +DV++L
Sbjct: 66  SATGSYAIYNSPSTVSFSPNGSPNSQQDSQSYPSDPHHSPDNTYGSPMSASCITDDVSDL 125

Query: 163 KHKIRELETVMLGPEPDISISNEIAMFGGLSHYSSETGKLKRMMEMISSGDVKE 2
           KHK+RELETVMLGP+ DI  S +       S  S E    +  MEMIS GD+K+
Sbjct: 126 KHKLRELETVMLGPDSDIINSYDSTFTPNKS--SLEMDSWRDTMEMISGGDLKQ 177


>ref|XP_002274103.1| PREDICTED: scarecrow-like transcription factor PAT1-like [Vitis
           vinifera]
          Length = 545

 Score =  153 bits (386), Expect = 5e-35
 Identities = 88/174 (50%), Positives = 113/174 (64%), Gaps = 1/174 (0%)
 Frame = -3

Query: 520 EHDFFHQTSRFYNQPIQDFESYFRNPIENLDNRLCSDDGGQGMQFSVQV-SEHYCTLASS 344
           +H    ++  FY+QP+   ES  + PI N+++  CSDDG QGM FS     E Y T  SS
Sbjct: 6   KHGISGRSGSFYSQPVPQDESC-QWPILNIEHHSCSDDGSQGMHFSGPTYCEQYGTHESS 64

Query: 343 TATGDYPGNSSPSTVSFSANGSPISPPDSQTYLSGTHHSPGNTYNSQVSGSCYINDVNNL 164
           +ATG +P  +SPSTVSFS  GSP S  DSQTY S   HSP N + S +SGSC  +DVN L
Sbjct: 65  SATGSFPIYNSPSTVSFSPEGSPASQQDSQTYPSDQLHSPENGHGSPISGSCLTDDVNEL 124

Query: 163 KHKIRELETVMLGPEPDISISNEIAMFGGLSHYSSETGKLKRMMEMISSGDVKE 2
           +HK+RELET MLGP+ DI   +E+ +   L+  S E  K K+MME+IS GD+KE
Sbjct: 125 RHKLRELETAMLGPDSDILDVHEV-IPRELNKISLEREKWKQMMEVISRGDLKE 177


>ref|XP_003617966.1| Chitin-inducible gibberellin-responsive protein [Medicago
           truncatula] gi|355519301|gb|AET00925.1| Chitin-inducible
           gibberellin-responsive protein [Medicago truncatula]
          Length = 544

 Score =  147 bits (372), Expect = 2e-33
 Identities = 78/169 (46%), Positives = 109/169 (64%), Gaps = 2/169 (1%)
 Frame = -3

Query: 505 HQTSRFYNQPIQDFESYFRNPIENLDNRLCSDDGGQGMQFSVQVSE--HYCTLASSTATG 332
           H++S  Y QP+Q  E+Y      NL+++L ++DGGQ  QFS   S   +YCTL SS+A G
Sbjct: 7   HRSSSMYYQPLQQIEAYCLPQYRNLNHQLYNNDGGQATQFSAPTSSDLYYCTLESSSAAG 66

Query: 331 DYPGNSSPSTVSFSANGSPISPPDSQTYLSGTHHSPGNTYNSQVSGSCYINDVNNLKHKI 152
            +   +SPSTVSFS N SP+S  +SQ+Y S  +HSP NTY S +SGSC   D+++ KHK+
Sbjct: 67  SFAVYNSPSTVSFSPNDSPMSQQESQSYPSDKYHSPDNTYGSPMSGSCITEDLSSFKHKL 126

Query: 151 RELETVMLGPEPDISISNEIAMFGGLSHYSSETGKLKRMMEMISSGDVK 5
           RELE+VMLGP+ D   S + A+  G +  S E    ++ M  ISS ++K
Sbjct: 127 RELESVMLGPDSDNLDSYDSAISNGTNFASLEMDSWRQTMVAISSKNLK 175


>ref|XP_002321179.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222861952|gb|EEE99494.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 547

 Score =  143 bits (360), Expect = 5e-32
 Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 1/167 (0%)
 Frame = -3

Query: 499 TSRFYNQPIQDFESYFRNPIENLDNRLCSDDGGQGMQFSVQVS-EHYCTLASSTATGDYP 323
           +SRF  QP+Q+ E+Y +     LD ++ S    QG  F++  S E YCTL SS+A G Y 
Sbjct: 13  SSRFLYQPMQEVETYCKPQSRTLDRQIYSSGSTQGTPFTIPNSHEQYCTLESSSANGSYA 72

Query: 322 GNSSPSTVSFSANGSPISPPDSQTYLSGTHHSPGNTYNSQVSGSCYINDVNNLKHKIREL 143
             +SPSTVSFS NGSP+S  +SQ+Y     HSP N   S +SGSC  +D ++  HK+REL
Sbjct: 73  AYNSPSTVSFSPNGSPLSQQESQSYSLEPRHSPDNASGSPLSGSCITDDAHDFSHKLREL 132

Query: 142 ETVMLGPEPDISISNEIAMFGGLSHYSSETGKLKRMMEMISSGDVKE 2
           ETVM GP+ DI  S E A+  G +  S E    +++M++IS GD+K+
Sbjct: 133 ETVMFGPDSDIIDSIENALESGTNIESLEMDSWRQIMDVISRGDLKQ 179


>ref|XP_002533870.1| Chitin-inducible gibberellin-responsive protein, putative [Ricinus
           communis] gi|223526192|gb|EEF28520.1| Chitin-inducible
           gibberellin-responsive protein, putative [Ricinus
           communis]
          Length = 582

 Score =  142 bits (359), Expect = 7e-32
 Identities = 76/166 (45%), Positives = 102/166 (61%), Gaps = 1/166 (0%)
 Frame = -3

Query: 499 TSRFYNQPIQDFESYFRNPIENLDNRLCSDDGGQGMQFSV-QVSEHYCTLASSTATGDYP 323
           +S+ YNQP+Q+FE+Y     + LD++L  +   Q    S+    + YCTL SS+A G YP
Sbjct: 13  SSKLYNQPMQEFEAYCMPQFQTLDHQLRYNGSSQRTHLSIPNARDQYCTLESSSANGSYP 72

Query: 322 GNSSPSTVSFSANGSPISPPDSQTYLSGTHHSPGNTYNSQVSGSCYINDVNNLKHKIREL 143
             +SPSTVS S NGSP+S  +SQ+Y    HHSP N Y S +SGSC  +DVN+ + K+REL
Sbjct: 73  IYNSPSTVSLSPNGSPVSQQESQSYPPDLHHSPDNNYGSPISGSCITDDVNDFRSKLREL 132

Query: 142 ETVMLGPEPDISISNEIAMFGGLSHYSSETGKLKRMMEMISSGDVK 5
           ET +LGP+     S E     G S  S E    ++MME IS GD+K
Sbjct: 133 ETDLLGPDYGFMESIESNFQNGSSIKSPEMDIWRQMMEAISRGDLK 178


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