BLASTX nr result

ID: Panax21_contig00036003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036003
         (927 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526240.1| conserved hypothetical protein [Ricinus comm...   184   3e-44
ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi...   182   7e-44
ref|XP_004158152.1| PREDICTED: F-box protein At5g07610-like [Cuc...   167   3e-39
ref|XP_004143739.1| PREDICTED: F-box protein At5g07610-like [Cuc...   166   7e-39
ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vi...   147   3e-33

>ref|XP_002526240.1| conserved hypothetical protein [Ricinus communis]
           gi|223534434|gb|EEF36137.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 393

 Score =  184 bits (467), Expect = 3e-44
 Identities = 129/306 (42%), Positives = 171/306 (55%), Gaps = 12/306 (3%)
 Frame = +2

Query: 41  DQSLSSAADQIGVNEDLIREILLYLPARSLIRFKSVSKQWRSLITDPQFSRHHTLLRKNP 220
           D SLS  A+ IG NEDLI +ILL LP + L+RFKSVSKQW SLI+ P FS  HTL   N 
Sbjct: 2   DSSLS--AEIIGSNEDLITQILLRLPVKPLLRFKSVSKQWLSLISTPHFSSLHTLRNPNH 59

Query: 221 TSFLPSGLFFYNSLSKSQQIESVSLSKTGTKIPSLSHPDPHSAGESISIVQSCNGLDLFR 400
           T    S LF  NS     + + +SLS + +   S + P        I I+QSCNGL L  
Sbjct: 60  TI---SALFLRNS---PLEFKFLSLSSSSSSSSSSASPLSFDLFHGIKILQSCNGLLL-- 111

Query: 401 LITIPD-RRIKLYCIRNSTTRQCKLIPLPEL------SPAESIVDCSLAFDPLKSPHYKI 559
             T+P   + + Y I N TT+Q  +  LP L      +   ++   +LAFDPLKS +YK+
Sbjct: 112 CSTLPKIGQKRNYYISNPTTKQ--MFTLPSLVGDANAASPTTLFGLNLAFDPLKSCNYKV 169

Query: 560 VCVKKVKYNPCQFEI--YSSETDDWRTTNVT-TNPWRMEFDNGVYWNGAIHWIKDDTIRL 730
           +CV+    +  Q++I  Y SE   WR + +    P+ M FDNGV+WNGAIHWI   +   
Sbjct: 170 ICVRSTTNSIYQYQIETYQSEIAAWRLSGLPFVAPFDMVFDNGVFWNGAIHWI---SATG 226

Query: 731 ECYRFDVEAENLTIMSMPQKP--QEGDRAYFRYFGEYNGHLHLVYVRSRAAKRFNVLEMD 904
               FD++ E   I SMP+ P   E  +  FRYFGE +GHLHL+ +      +FNV EM+
Sbjct: 227 NAIYFDMDRE--CISSMPKLPFSYEWGKRRFRYFGESDGHLHLIEIYGLRTTQFNVYEME 284

Query: 905 KVTLKW 922
           K    W
Sbjct: 285 KDYSFW 290


>ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|297743579|emb|CBI36446.3| unnamed protein product
           [Vitis vinifera]
          Length = 374

 Score =  182 bits (463), Expect = 7e-44
 Identities = 117/296 (39%), Positives = 157/296 (53%), Gaps = 3/296 (1%)
 Frame = +2

Query: 47  SLSSAADQIGVNEDLIREILLYLPARSLIRFKSVSKQWRSLITDPQFSRHHTLLRKNPTS 226
           S  S+A  +  N+DL+ E+LL LP +SL++FKSVSK W SLITDP FSR    L+ NP S
Sbjct: 9   SQESSAHIVASNDDLLSELLLRLPIKSLLKFKSVSKHWLSLITDPHFSRRKN-LKPNPVS 67

Query: 227 FLPSGLFFYNSLSKSQQIESVSLSKTGTKIPSLSHPDPHSAGESISIVQSCNGLDLFRLI 406
            L S +           ++ +  S   T +  + HP        I I+QSCNGL     +
Sbjct: 68  ALFSFV----------PLDPLQTSAPFTSLTFVDHP------RGIEILQSCNGLFCCSSV 111

Query: 407 TIPDRRIKLYCIRNSTTRQCKLIPLPELSPAESIVDCSLAFDPLKSPHYKIVCVKKVK-- 580
              D   K Y I N TT+Q   +P         ++  +LAFDP KS  YK+VCV++ K  
Sbjct: 112 DYNDSERKYY-IYNPTTKQFTTLPPLCGRSVRRVLGVNLAFDPSKSHTYKVVCVQRCKSS 170

Query: 581 YNPCQFEIYSSETDDWRTTNVT-TNPWRMEFDNGVYWNGAIHWIKDDTIRLECYRFDVEA 757
           Y+ CQ +I S ET  WR + V    P  ++F +GVYWNGAIHWI     R     FD+  
Sbjct: 171 YDHCQIQISSLETGPWRVSGVPFAAPISVDFPSGVYWNGAIHWISP---REASLYFDLNE 227

Query: 758 ENLTIMSMPQKPQEGDRAYFRYFGEYNGHLHLVYVRSRAAKRFNVLEMDKVTLKWF 925
           E +  M MP  P + +    R FGE  GHLHLV +   +  +FNV EM++    WF
Sbjct: 228 ELVREMPMPPVPDDSNERGIRCFGESCGHLHLVEIYESSTTQFNVYEMERDHSGWF 283


>ref|XP_004158152.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 393

 Score =  167 bits (423), Expect = 3e-39
 Identities = 108/297 (36%), Positives = 156/297 (52%), Gaps = 6/297 (2%)
 Frame = +2

Query: 53  SSAADQIGVNEDLIREILLYLPARSLIRFKSVSKQWRSLITDPQFSRHHTLL-RKNPTSF 229
           S A +Q+ +N+DL  +ILL LP RSL+RFKSVSK+W SLI++P FS   T+    NPT  
Sbjct: 10  SPATEQVLINDDLFFQILLRLPIRSLLRFKSVSKRWLSLISNPNFSHRRTISHHPNPT-- 67

Query: 230 LPSGLFFYNSLSKSQQIESVSLSKTGTKIPSLSHPDPHSAGE--SISIVQSCNGLDLFRL 403
            PSG+FF     KS   + ++ +   ++ P  S   PH A +     I+QSCNGL L   
Sbjct: 68  -PSGIFFPRPTPKSPPFDFINFTTNPSRPPFES---PHFADDKHGFLILQSCNGLFLCST 123

Query: 404 ITIPDRRIKLYCIRNSTTRQCKLIPLPELSPAESIVDCSLAFDPLKSPHYKIVCVK--KV 577
               +   + + I N TT     +P  ++    ++   +LAFDPL+S  YK++CV+    
Sbjct: 124 YN-GNYSTRDFYIHNPTTNHHTKLPYLQVG---AVFGLNLAFDPLRSSDYKVICVRYSDA 179

Query: 578 KYNPCQFEIYSSETDDWR-TTNVTTNPWRMEFDNGVYWNGAIHWIKDDTIRLECYRFDVE 754
             +  Q E+YSS T  WR    V + P  + FD+GVYWN A+HWI      L    FD+ 
Sbjct: 180 YTDTFQIEMYSSVTGPWRPVQGVFSAPLSVRFDSGVYWNNAVHWISTSENSL---YFDLR 236

Query: 755 AENLTIMSMPQKPQEGDRAYFRYFGEYNGHLHLVYVRSRAAKRFNVLEMDKVTLKWF 925
            E +  + MP  P   ++   +YFG   G+LHL+ +        NV +M      WF
Sbjct: 237 EEKVHDLPMPGVPDGQEQRRVKYFGTCGGNLHLIEIYEAQEMELNVYQMQDDHCGWF 293


>ref|XP_004143739.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 393

 Score =  166 bits (420), Expect = 7e-39
 Identities = 108/297 (36%), Positives = 156/297 (52%), Gaps = 6/297 (2%)
 Frame = +2

Query: 53  SSAADQIGVNEDLIREILLYLPARSLIRFKSVSKQWRSLITDPQFSRHHTLL-RKNPTSF 229
           S A +Q+ +N+DL  +ILL LP RSL+RFKSVSK+W SLI++P FS   T+    NPT  
Sbjct: 10  SPATEQVLINDDLFFQILLRLPIRSLLRFKSVSKRWLSLISNPNFSHRRTISHHPNPT-- 67

Query: 230 LPSGLFFYNSLSKSQQIESVSLSKTGTKIPSLSHPDPHSAGE--SISIVQSCNGLDLFRL 403
            PSG+FF     KS   + ++ +   ++ P  S   PH A +     I+QSCNGL L   
Sbjct: 68  -PSGIFFPRPTPKSPPFDFINFTTNPSRPPFES---PHFADDKHGFLILQSCNGLFLCST 123

Query: 404 ITIPDRRIKLYCIRNSTTRQCKLIPLPELSPAESIVDCSLAFDPLKSPHYKIVCVK--KV 577
               +   + + I N TT     +P  ++    ++   +LAFDPL+S  YK++CV+    
Sbjct: 124 YN-GNYSTRDFYIHNPTTNHHTKLPYLQVG---AVFGLNLAFDPLRSSDYKVICVRYSDA 179

Query: 578 KYNPCQFEIYSSETDDWR-TTNVTTNPWRMEFDNGVYWNGAIHWIKDDTIRLECYRFDVE 754
             +  Q E+YSS T  WR    V + P  M FD+GVYWN A+HWI      L    FD+ 
Sbjct: 180 YTDTFQIEMYSSVTGPWRPVQGVFSAPLSMRFDSGVYWNNAVHWISTSENSL---YFDLR 236

Query: 755 AENLTIMSMPQKPQEGDRAYFRYFGEYNGHLHLVYVRSRAAKRFNVLEMDKVTLKWF 925
            E +  + MP  P   ++   +YFG   G+L+L+ +        NV +M      WF
Sbjct: 237 EEKVHDLPMPGVPDGQEQRRVKYFGTCGGNLNLIEIYEAQEMELNVYQMQDDHCGWF 293


>ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|296090309|emb|CBI40128.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score =  147 bits (371), Expect = 3e-33
 Identities = 99/295 (33%), Positives = 149/295 (50%), Gaps = 5/295 (1%)
 Frame = +2

Query: 53  SSAADQIGVNEDLIREILLYLPARSLIRFKSVSKQWRSLITDPQFSRHHTLLRKNPTSFL 232
           +S+A+Q+  N DL+ EI L  P + L+RF+SVSK+W SLI+DP F   H   R++  S  
Sbjct: 26  TSSAEQVAGNGDLLTEIFLRTPVKPLLRFRSVSKRWLSLISDPHFCHRHA--RRSSASVP 83

Query: 233 PSGLFFYNSLSKSQQIESVSLSKTGTKIPSLSHPDPHSAGESISIVQSCNGLDLFRLITI 412
              L   NS       + +S  +     P L   D       + ++Q CNGL     +  
Sbjct: 84  GVLLGLPNS-----NFDFISFDEKKASEPPLRSLDFIGDPLGVKVLQVCNGLLCCSTVRS 138

Query: 413 PDRRIKLYCIRNSTTRQCKLIPLPELSPA-ESIVDCSLAFDPLKSPHYKIVCVK--KVKY 583
                + Y I N  TR+  ++P P  S   +++   +LAFDP KSP+Y ++CV+  +V  
Sbjct: 139 LGTS-RNYYICNLATRRFSVLPPPCSSGGRDTVFGINLAFDPSKSPYYSVICVRSCEVSI 197

Query: 584 NPCQFEIYSSETDDWRTTNVTTN-PWRMEFDNGVYWNGAIHWIKDDTIRLECYRFDVEAE 760
           +  Q EIYSS T DWR +      P+ M F +GV+WNGA+HWI      L    F ++  
Sbjct: 198 SHYQIEIYSSGTGDWRLSGKPFRAPFDMVFYDGVFWNGAVHWISPSGASL---YFGIDEG 254

Query: 761 NL-TIMSMPQKPQEGDRAYFRYFGEYNGHLHLVYVRSRAAKRFNVLEMDKVTLKW 922
            + T+   P  P    +   R+FGE  GHLH++ +      +F V EM++    W
Sbjct: 255 RIDTMPPPPPGPGGWGKRRIRHFGESGGHLHIIEIYGPRTTQFVVYEMERDYSNW 309


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