BLASTX nr result

ID: Panax21_contig00035232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035232
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containi...   137   1e-30
emb|CBI36131.3| unnamed protein product [Vitis vinifera]              137   1e-30
ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat...   130   2e-28
ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containi...   129   5e-28
dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]    127   2e-27

>ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score =  137 bits (346), Expect = 1e-30
 Identities = 61/68 (89%), Positives = 66/68 (97%)
 Frame = -1

Query: 656 SERLAIAFGLISTPPGTKLLVTKNLRACEDCHVAIKFISKITQREIIIRDVNRYHHFKDG 477
           SERLAIAFGLISTPPGT+LL+TKNLR CEDCHVAIKFISKIT+REI +RDVNRYHHFKDG
Sbjct: 581 SERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDG 640

Query: 476 MCSCGDYW 453
           +CSCGDYW
Sbjct: 641 VCSCGDYW 648


>emb|CBI36131.3| unnamed protein product [Vitis vinifera]
          Length = 550

 Score =  137 bits (346), Expect = 1e-30
 Identities = 61/68 (89%), Positives = 66/68 (97%)
 Frame = -1

Query: 656 SERLAIAFGLISTPPGTKLLVTKNLRACEDCHVAIKFISKITQREIIIRDVNRYHHFKDG 477
           SERLAIAFGLISTPPGT+LL+TKNLR CEDCHVAIKFISKIT+REI +RDVNRYHHFKDG
Sbjct: 483 SERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDG 542

Query: 476 MCSCGDYW 453
           +CSCGDYW
Sbjct: 543 VCSCGDYW 550


>ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 631

 Score =  130 bits (327), Expect = 2e-28
 Identities = 58/68 (85%), Positives = 64/68 (94%)
 Frame = -1

Query: 656 SERLAIAFGLISTPPGTKLLVTKNLRACEDCHVAIKFISKITQREIIIRDVNRYHHFKDG 477
           SERLAIAFGLIST PGT+LL+TKNLR CEDCHVAIKFISKIT+REI +RDVNRYHHF+ G
Sbjct: 564 SERLAIAFGLISTLPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFRHG 623

Query: 476 MCSCGDYW 453
           +CSCGDYW
Sbjct: 624 LCSCGDYW 631


>ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449522468|ref|XP_004168248.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score =  129 bits (324), Expect = 5e-28
 Identities = 59/68 (86%), Positives = 63/68 (92%)
 Frame = -1

Query: 656 SERLAIAFGLISTPPGTKLLVTKNLRACEDCHVAIKFISKITQREIIIRDVNRYHHFKDG 477
           SERLAIAFGLIST  GTKLL+ KNLR CEDCHVAIKFISKIT+REI IRDVNRYHHFKDG
Sbjct: 507 SERLAIAFGLISTSAGTKLLIIKNLRICEDCHVAIKFISKITEREITIRDVNRYHHFKDG 566

Query: 476 MCSCGDYW 453
           +CSCGD+W
Sbjct: 567 VCSCGDFW 574


>dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 637

 Score =  127 bits (318), Expect = 2e-27
 Identities = 59/68 (86%), Positives = 61/68 (89%)
 Frame = -1

Query: 656 SERLAIAFGLISTPPGTKLLVTKNLRACEDCHVAIKFISKITQREIIIRDVNRYHHFKDG 477
           SERLAIAFGLISTPPGTKLLVTKNLR CEDCHV IK IS+I QREIIIRDVNRYHHF +G
Sbjct: 570 SERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLISQIVQREIIIRDVNRYHHFVNG 629

Query: 476 MCSCGDYW 453
            CSC DYW
Sbjct: 630 ECSCKDYW 637


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