BLASTX nr result

ID: Panax21_contig00034872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034872
         (874 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c...    65   3e-08
emb|CBI22162.3| unnamed protein product [Vitis vinifera]               65   3e-08
emb|CAN79923.1| hypothetical protein VITISV_042443 [Vitis vinifera]    65   3e-08

>ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c [Vitis vinifera]
          Length = 494

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 29/56 (51%), Positives = 41/56 (73%)
 Frame = -3

Query: 263 PQQLPPGFSQLPGVRGAYLTKLTALQKFNFIDPLVAEFYTVAKHFDHVFISQNNII 96
           P Q+P  FSQ  GVR +YL + TAL++F F+DPL A+F+T AK F+H+ + +NN I
Sbjct: 56  PLQMPSTFSQASGVRESYLARRTALRQFKFVDPLAAQFHTDAKPFNHLLLDKNNDI 111


>emb|CBI22162.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 29/56 (51%), Positives = 41/56 (73%)
 Frame = -3

Query: 263 PQQLPPGFSQLPGVRGAYLTKLTALQKFNFIDPLVAEFYTVAKHFDHVFISQNNII 96
           P Q+P  FSQ  GVR +YL + TAL++F F+DPL A+F+T AK F+H+ + +NN I
Sbjct: 56  PLQMPSTFSQASGVRESYLARRTALRQFKFVDPLAAQFHTDAKPFNHLLLDKNNDI 111


>emb|CAN79923.1| hypothetical protein VITISV_042443 [Vitis vinifera]
          Length = 491

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 29/56 (51%), Positives = 41/56 (73%)
 Frame = -3

Query: 263 PQQLPPGFSQLPGVRGAYLTKLTALQKFNFIDPLVAEFYTVAKHFDHVFISQNNII 96
           P Q+P  FSQ  GVR +YL + TAL++F F+DPL A+F+T AK F+H+ + +NN I
Sbjct: 56  PLQMPSTFSQASGVRESYLARRTALRQFKFVDPLAAQFHTDAKPFNHLLLDKNNDI 111


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