BLASTX nr result

ID: Panax21_contig00034657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034657
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268838.2| PREDICTED: cyclin-T1-5-like isoform 1 [Vitis...   128   5e-28
ref|XP_002513390.1| Cyclin-L2, putative [Ricinus communis] gi|22...   119   3e-25
ref|XP_002310097.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
emb|CAN74426.1| hypothetical protein VITISV_010983 [Vitis vinifera]   119   3e-25
ref|XP_002306411.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-21

>ref|XP_002268838.2| PREDICTED: cyclin-T1-5-like isoform 1 [Vitis vinifera]
          Length = 623

 Score =  128 bits (321), Expect = 5e-28
 Identities = 65/115 (56%), Positives = 79/115 (68%)
 Frame = +1

Query: 1   EVSNQMLELYEQNRVPPSQTSEVEGSAGGGVTTRAPIKVPAATEEHLSNNSNSQDGGATS 180
           EVSNQMLELYEQNRVPPSQ SEVEGS GGG   RA  K PAA EE++   SN+  GG   
Sbjct: 258 EVSNQMLELYEQNRVPPSQGSEVEGSVGGGAAHRATSKAPAANEEYVM--SNAHGGGTPL 315

Query: 181 KPGALKSASSRPVPDQSHLDNHAGPPRATQNQTKDYVNTGMNSKVDHKRDGDVND 345
           KP   K  +S+P  DQ ++DN +GP R +QN++ DY +T M S  DHK DG+ +D
Sbjct: 316 KPATSKPVASKPASDQPYVDNISGPSRTSQNRSNDYGSTEMRSASDHKADGESSD 370


>ref|XP_002513390.1| Cyclin-L2, putative [Ricinus communis] gi|223547298|gb|EEF48793.1|
           Cyclin-L2, putative [Ricinus communis]
          Length = 570

 Score =  119 bits (298), Expect = 3e-25
 Identities = 61/130 (46%), Positives = 80/130 (61%)
 Frame = +1

Query: 1   EVSNQMLELYEQNRVPPSQTSEVEGSAGGGVTTRAPIKVPAATEEHLSNNSNSQDGGATS 180
           EVSNQMLELYEQNRVPPS  ++ EGS  GG T +   K  ++ EEH + NS+SQ GG TS
Sbjct: 212 EVSNQMLELYEQNRVPPSTNNDAEGSTVGGTTHQGTSKASSSKEEHATTNSHSQAGGITS 271

Query: 181 KPGALKSASSRPVPDQSHLDNHAGPPRATQNQTKDYVNTGMNSKVDHKRDGDVNDNQCYD 360
           +PG  KS         S  DNH G PR T+NQ  ++V   M S  +H  DG++ DN  + 
Sbjct: 272 RPGTSKS--------MSLADNHGGAPRTTRNQGNEHVGEEMKSSPEHNADGELTDNLDHG 323

Query: 361 SESLPQQGNT 390
            +++P+  NT
Sbjct: 324 IDTVPRHENT 333


>ref|XP_002310097.1| predicted protein [Populus trichocarpa] gi|222853000|gb|EEE90547.1|
           predicted protein [Populus trichocarpa]
          Length = 312

 Score =  119 bits (297), Expect = 3e-25
 Identities = 61/126 (48%), Positives = 81/126 (64%)
 Frame = +1

Query: 16  MLELYEQNRVPPSQTSEVEGSAGGGVTTRAPIKVPAATEEHLSNNSNSQDGGATSKPGAL 195
           MLELYEQN+VPPS  SE EGS  GG + RA  K  ++ EEH++ N++SQ GG +++ G  
Sbjct: 1   MLELYEQNQVPPSANSEAEGSIVGGASHRATSKASSSNEEHVAPNNHSQTGGISTRLGN- 59

Query: 196 KSASSRPVPDQSHLDNHAGPPRATQNQTKDYVNTGMNSKVDHKRDGDVNDNQCYDSESLP 375
            +  SRPV +Q   DNH GPPR +QN    + +  M S  DH  DG+  D+  Y+ E+LP
Sbjct: 60  SNPMSRPVHEQPLADNHVGPPRTSQNHGSYHGSAEMRSASDHNMDGEPKDDLPYEIETLP 119

Query: 376 QQGNTR 393
            QGNTR
Sbjct: 120 SQGNTR 125


>emb|CAN74426.1| hypothetical protein VITISV_010983 [Vitis vinifera]
          Length = 361

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/110 (54%), Positives = 74/110 (67%)
 Frame = +1

Query: 16  MLELYEQNRVPPSQTSEVEGSAGGGVTTRAPIKVPAATEEHLSNNSNSQDGGATSKPGAL 195
           MLELYEQNRVPPSQ SEVEGS GGG   RA  K PAA EE++   SN+  GG   KP   
Sbjct: 1   MLELYEQNRVPPSQGSEVEGSVGGGAAHRATSKAPAANEEYVM--SNAHGGGTPLKPATS 58

Query: 196 KSASSRPVPDQSHLDNHAGPPRATQNQTKDYVNTGMNSKVDHKRDGDVND 345
           K  +S+P  DQ ++DN +GP R +QN++ DY +T M S  DHK DG+ +D
Sbjct: 59  KPVASKPASDQPYVDNISGPSRTSQNRSNDYGSTEMRSASDHKADGESSD 108


>ref|XP_002306411.1| predicted protein [Populus trichocarpa] gi|222855860|gb|EEE93407.1|
           predicted protein [Populus trichocarpa]
          Length = 612

 Score =  105 bits (263), Expect = 3e-21
 Identities = 58/131 (44%), Positives = 70/131 (53%)
 Frame = +1

Query: 1   EVSNQMLELYEQNRVPPSQTSEVEGSAGGGVTTRAPIKVPAATEEHLSNNSNSQDGGATS 180
           EVSNQMLELYEQNRVPPS  SE EGS   G +  A  K  +  EE L+ NS S  GG   
Sbjct: 258 EVSNQMLELYEQNRVPPSANSEAEGSIVDGASHLASSKASSGNEEQLATNSPSHTGGIMH 317

Query: 181 KPGALKSASSRPVPDQSHLDNHAGPPRATQNQTKDYVNTGMNSKVDHKRDGDVNDNQCYD 360
           K              Q H DNH GPPR +QN   D+ +  + S  DH  DG+  D+  ++
Sbjct: 318 K--------------QPHADNHVGPPRTSQNHGNDHGSAEIRSASDHNMDGEPKDDLHHE 363

Query: 361 SESLPQQGNTR 393
            E+ P Q N R
Sbjct: 364 REAFPSQDNMR 374


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