BLASTX nr result

ID: Panax21_contig00033976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033976
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624492.1| Pentatricopeptide repeat-containing protein ...   169   4e-40
gb|AAU90328.2| Pentatricopeptide repeat domain containing protei...   164   9e-39
ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat...   164   2e-38
emb|CBI21281.3| unnamed protein product [Vitis vinifera]              164   2e-38
ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat...   160   2e-37

>ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355499507|gb|AES80710.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  169 bits (428), Expect = 4e-40
 Identities = 78/92 (84%), Positives = 86/92 (93%)
 Frame = +1

Query: 1    DTSCALHNVDEEIKIESLKYHSERLAIAFSLINTPEGSSILVMKNLRACTDCHAAIKVIS 180
            D+SCALHNVDEE+K+ESLKYHSER+AIAF+LI+TPEGS ILVMKNLRACTDCHAAIKVIS
Sbjct: 786  DSSCALHNVDEEVKVESLKYHSERIAIAFALISTPEGSPILVMKNLRACTDCHAAIKVIS 845

Query: 181  KIVGRHITVRDSSRFHHFRNGFCSCEDYW*DY 276
            KIV R ITVRDSSRFHHFR+GFC+C DYW  Y
Sbjct: 846  KIVRREITVRDSSRFHHFRDGFCTCRDYWVQY 877


>gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  164 bits (416), Expect = 9e-39
 Identities = 77/89 (86%), Positives = 82/89 (92%)
 Frame = +1

Query: 1   DTSCALHNVDEEIKIESLKYHSERLAIAFSLINTPEGSSILVMKNLRACTDCHAAIKVIS 180
           DTSC L NVDEE+KIESLKYHSERLAIAF+LINTPEGS I++MKNLRAC DCHAAIKVIS
Sbjct: 731 DTSCTLQNVDEEMKIESLKYHSERLAIAFALINTPEGSPIIIMKNLRACVDCHAAIKVIS 790

Query: 181 KIVGRHITVRDSSRFHHFRNGFCSCEDYW 267
           KIVGR ITVRDSSRFHHFR+G CSC DYW
Sbjct: 791 KIVGREITVRDSSRFHHFRDGSCSCGDYW 819


>ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  164 bits (414), Expect = 2e-38
 Identities = 76/89 (85%), Positives = 83/89 (93%)
 Frame = +1

Query: 1    DTSCALHNVDEEIKIESLKYHSERLAIAFSLINTPEGSSILVMKNLRACTDCHAAIKVIS 180
            DTSCALHN DE+ K+ESLKYHSERLAIAF+LI+TPEGS ILVMKNLRAC DCHAAIKVIS
Sbjct: 737  DTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVIS 796

Query: 181  KIVGRHITVRDSSRFHHFRNGFCSCEDYW 267
            KIVGR ITVRDS+RFHHFR+GFCSC D+W
Sbjct: 797  KIVGREITVRDSTRFHHFRDGFCSCGDFW 825


>emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score =  164 bits (414), Expect = 2e-38
 Identities = 76/89 (85%), Positives = 83/89 (93%)
 Frame = +1

Query: 1   DTSCALHNVDEEIKIESLKYHSERLAIAFSLINTPEGSSILVMKNLRACTDCHAAIKVIS 180
           DTSCALHN DE+ K+ESLKYHSERLAIAF+LI+TPEGS ILVMKNLRAC DCHAAIKVIS
Sbjct: 697 DTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVIS 756

Query: 181 KIVGRHITVRDSSRFHHFRNGFCSCEDYW 267
           KIVGR ITVRDS+RFHHFR+GFCSC D+W
Sbjct: 757 KIVGREITVRDSTRFHHFRDGFCSCGDFW 785


>ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score =  160 bits (405), Expect = 2e-37
 Identities = 73/89 (82%), Positives = 83/89 (93%)
 Frame = +1

Query: 1   DTSCALHNVDEEIKIESLKYHSERLAIAFSLINTPEGSSILVMKNLRACTDCHAAIKVIS 180
           D++CALHNVDEE+K+ESLKYHSER+AIAF+LI+TP+GS ILVMKNLRAC DCHAAIKVIS
Sbjct: 727 DSTCALHNVDEEVKVESLKYHSERIAIAFALISTPKGSPILVMKNLRACNDCHAAIKVIS 786

Query: 181 KIVGRHITVRDSSRFHHFRNGFCSCEDYW 267
           KIV R ITVRDSSRFHHF +G CSC+DYW
Sbjct: 787 KIVNREITVRDSSRFHHFTDGSCSCKDYW 815


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