BLASTX nr result
ID: Panax21_contig00033940
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00033940 (378 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003545753.1| PREDICTED: protein RMD5 homolog A-like [Glyc... 152 4e-35 ref|XP_003543119.1| PREDICTED: protein RMD5 homolog A-like isofo... 152 4e-35 ref|XP_003593323.1| RMD5-like protein [Medicago truncatula] gi|3... 150 1e-34 gb|ABN05733.1| Zinc finger, RING-type [Medicago truncatula] 150 1e-34 gb|ADE77253.1| unknown [Picea sitchensis] 147 9e-34 >ref|XP_003545753.1| PREDICTED: protein RMD5 homolog A-like [Glycine max] Length = 385 Score = 152 bits (383), Expect = 4e-35 Identities = 67/83 (80%), Positives = 75/83 (90%) Frame = +3 Query: 3 KEWHDMKQLPVPVDLGKEFQFHSIFVCPVSRGQSSDENPPMLLPCGHVLCNQSIVKLSKN 182 +EW +MKQLPVPV+LGKEFQFHSIFVCPVSR Q S+ENPPMLLPC HVLC QSI+KLSKN Sbjct: 302 QEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLCKQSIMKLSKN 361 Query: 183 GTRTFKCPYCPLEASLAECRQLY 251 TRTFKCPYCP EA++A C+QLY Sbjct: 362 STRTFKCPYCPAEATVANCKQLY 384 >ref|XP_003543119.1| PREDICTED: protein RMD5 homolog A-like isoform 1 [Glycine max] gi|356549477|ref|XP_003543120.1| PREDICTED: protein RMD5 homolog A-like isoform 2 [Glycine max] Length = 385 Score = 152 bits (383), Expect = 4e-35 Identities = 67/83 (80%), Positives = 75/83 (90%) Frame = +3 Query: 3 KEWHDMKQLPVPVDLGKEFQFHSIFVCPVSRGQSSDENPPMLLPCGHVLCNQSIVKLSKN 182 +EW +MKQLPVPV+LGKEFQFHSIFVCPVSR Q S+ENPPMLLPC HVLC QSI+KLSKN Sbjct: 302 QEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLCKQSIMKLSKN 361 Query: 183 GTRTFKCPYCPLEASLAECRQLY 251 TRTFKCPYCP EA++A C+QLY Sbjct: 362 STRTFKCPYCPAEATVANCKQLY 384 >ref|XP_003593323.1| RMD5-like protein [Medicago truncatula] gi|355482371|gb|AES63574.1| RMD5-like protein [Medicago truncatula] Length = 387 Score = 150 bits (379), Expect = 1e-34 Identities = 66/83 (79%), Positives = 75/83 (90%) Frame = +3 Query: 3 KEWHDMKQLPVPVDLGKEFQFHSIFVCPVSRGQSSDENPPMLLPCGHVLCNQSIVKLSKN 182 +EW +MKQLPVPV+LGKEFQFHSIFVCPVSR Q S+ENPPMLLPC HVLC QSI+KLSKN Sbjct: 304 QEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLCKQSIMKLSKN 363 Query: 183 GTRTFKCPYCPLEASLAECRQLY 251 TRTFKCPYCP EA++A CRQ++ Sbjct: 364 STRTFKCPYCPAEATVAHCRQVF 386 >gb|ABN05733.1| Zinc finger, RING-type [Medicago truncatula] Length = 166 Score = 150 bits (379), Expect = 1e-34 Identities = 66/83 (79%), Positives = 75/83 (90%) Frame = +3 Query: 3 KEWHDMKQLPVPVDLGKEFQFHSIFVCPVSRGQSSDENPPMLLPCGHVLCNQSIVKLSKN 182 +EW +MKQLPVPV+LGKEFQFHSIFVCPVSR Q S+ENPPMLLPC HVLC QSI+KLSKN Sbjct: 83 QEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLCKQSIMKLSKN 142 Query: 183 GTRTFKCPYCPLEASLAECRQLY 251 TRTFKCPYCP EA++A CRQ++ Sbjct: 143 STRTFKCPYCPAEATVAHCRQVF 165 >gb|ADE77253.1| unknown [Picea sitchensis] Length = 384 Score = 147 bits (371), Expect = 9e-34 Identities = 63/83 (75%), Positives = 75/83 (90%) Frame = +3 Query: 3 KEWHDMKQLPVPVDLGKEFQFHSIFVCPVSRGQSSDENPPMLLPCGHVLCNQSIVKLSKN 182 +EW M+QLPV ++L +EFQFHSIF CPVSR QS++ENPPML+PCGHVLC QSIVKLSK+ Sbjct: 301 QEWQTMRQLPVEIELDREFQFHSIFACPVSRDQSTEENPPMLMPCGHVLCKQSIVKLSKS 360 Query: 183 GTRTFKCPYCPLEASLAECRQLY 251 TRTFKCPYCPLEA++A+CRQLY Sbjct: 361 NTRTFKCPYCPLEATVAQCRQLY 383