BLASTX nr result

ID: Panax21_contig00033940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033940
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545753.1| PREDICTED: protein RMD5 homolog A-like [Glyc...   152   4e-35
ref|XP_003543119.1| PREDICTED: protein RMD5 homolog A-like isofo...   152   4e-35
ref|XP_003593323.1| RMD5-like protein [Medicago truncatula] gi|3...   150   1e-34
gb|ABN05733.1| Zinc finger, RING-type [Medicago truncatula]           150   1e-34
gb|ADE77253.1| unknown [Picea sitchensis]                             147   9e-34

>ref|XP_003545753.1| PREDICTED: protein RMD5 homolog A-like [Glycine max]
          Length = 385

 Score =  152 bits (383), Expect = 4e-35
 Identities = 67/83 (80%), Positives = 75/83 (90%)
 Frame = +3

Query: 3   KEWHDMKQLPVPVDLGKEFQFHSIFVCPVSRGQSSDENPPMLLPCGHVLCNQSIVKLSKN 182
           +EW +MKQLPVPV+LGKEFQFHSIFVCPVSR Q S+ENPPMLLPC HVLC QSI+KLSKN
Sbjct: 302 QEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLCKQSIMKLSKN 361

Query: 183 GTRTFKCPYCPLEASLAECRQLY 251
            TRTFKCPYCP EA++A C+QLY
Sbjct: 362 STRTFKCPYCPAEATVANCKQLY 384


>ref|XP_003543119.1| PREDICTED: protein RMD5 homolog A-like isoform 1 [Glycine max]
           gi|356549477|ref|XP_003543120.1| PREDICTED: protein RMD5
           homolog A-like isoform 2 [Glycine max]
          Length = 385

 Score =  152 bits (383), Expect = 4e-35
 Identities = 67/83 (80%), Positives = 75/83 (90%)
 Frame = +3

Query: 3   KEWHDMKQLPVPVDLGKEFQFHSIFVCPVSRGQSSDENPPMLLPCGHVLCNQSIVKLSKN 182
           +EW +MKQLPVPV+LGKEFQFHSIFVCPVSR Q S+ENPPMLLPC HVLC QSI+KLSKN
Sbjct: 302 QEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLCKQSIMKLSKN 361

Query: 183 GTRTFKCPYCPLEASLAECRQLY 251
            TRTFKCPYCP EA++A C+QLY
Sbjct: 362 STRTFKCPYCPAEATVANCKQLY 384


>ref|XP_003593323.1| RMD5-like protein [Medicago truncatula] gi|355482371|gb|AES63574.1|
           RMD5-like protein [Medicago truncatula]
          Length = 387

 Score =  150 bits (379), Expect = 1e-34
 Identities = 66/83 (79%), Positives = 75/83 (90%)
 Frame = +3

Query: 3   KEWHDMKQLPVPVDLGKEFQFHSIFVCPVSRGQSSDENPPMLLPCGHVLCNQSIVKLSKN 182
           +EW +MKQLPVPV+LGKEFQFHSIFVCPVSR Q S+ENPPMLLPC HVLC QSI+KLSKN
Sbjct: 304 QEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLCKQSIMKLSKN 363

Query: 183 GTRTFKCPYCPLEASLAECRQLY 251
            TRTFKCPYCP EA++A CRQ++
Sbjct: 364 STRTFKCPYCPAEATVAHCRQVF 386


>gb|ABN05733.1| Zinc finger, RING-type [Medicago truncatula]
          Length = 166

 Score =  150 bits (379), Expect = 1e-34
 Identities = 66/83 (79%), Positives = 75/83 (90%)
 Frame = +3

Query: 3   KEWHDMKQLPVPVDLGKEFQFHSIFVCPVSRGQSSDENPPMLLPCGHVLCNQSIVKLSKN 182
           +EW +MKQLPVPV+LGKEFQFHSIFVCPVSR Q S+ENPPMLLPC HVLC QSI+KLSKN
Sbjct: 83  QEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLCKQSIMKLSKN 142

Query: 183 GTRTFKCPYCPLEASLAECRQLY 251
            TRTFKCPYCP EA++A CRQ++
Sbjct: 143 STRTFKCPYCPAEATVAHCRQVF 165


>gb|ADE77253.1| unknown [Picea sitchensis]
          Length = 384

 Score =  147 bits (371), Expect = 9e-34
 Identities = 63/83 (75%), Positives = 75/83 (90%)
 Frame = +3

Query: 3   KEWHDMKQLPVPVDLGKEFQFHSIFVCPVSRGQSSDENPPMLLPCGHVLCNQSIVKLSKN 182
           +EW  M+QLPV ++L +EFQFHSIF CPVSR QS++ENPPML+PCGHVLC QSIVKLSK+
Sbjct: 301 QEWQTMRQLPVEIELDREFQFHSIFACPVSRDQSTEENPPMLMPCGHVLCKQSIVKLSKS 360

Query: 183 GTRTFKCPYCPLEASLAECRQLY 251
            TRTFKCPYCPLEA++A+CRQLY
Sbjct: 361 NTRTFKCPYCPLEATVAQCRQLY 383