BLASTX nr result

ID: Panax21_contig00033753 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033753
         (979 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300081.1| predicted protein [Populus trichocarpa] gi|2...   280   5e-73
emb|CBI17696.3| unnamed protein product [Vitis vinifera]              271   1e-70
ref|XP_002270991.1| PREDICTED: UPF0392 protein RCOM_0530710-like...   270   4e-70
ref|XP_002526930.1| ubiquitin-protein ligase, putative [Ricinus ...   237   4e-60
gb|ADN34072.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]    211   2e-52

>ref|XP_002300081.1| predicted protein [Populus trichocarpa] gi|222847339|gb|EEE84886.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score =  280 bits (715), Expect = 5e-73
 Identities = 147/238 (61%), Positives = 174/238 (73%), Gaps = 8/238 (3%)
 Frame = -3

Query: 698 MKDRRKRGHFKPWKXXXXXXXXXXXF----SGFTFSTLRLFFT--ERYHHPQLVSSWRTP 537
           MKDRRKR     W                 SGFTFST R FF   E++H P++VS+WRTP
Sbjct: 1   MKDRRKRDVVS-WNRFFWCTLFLVFSCVLFSGFTFSTFRFFFFFGEKFH-PEIVSTWRTP 58

Query: 536 AMEAISGDSPATPVLSVRETVIFPDQAVLFLKYPPSTPLFTKDDIDCIYISPN--SSQPQ 363
           AMEA+SGDS A P  S+RETVI PDQ ++FLKYPPS+ LFTK+D+ C+Y+S N  SSQ Q
Sbjct: 59  AMEALSGDSSAVPAPSIRETVILPDQVLVFLKYPPSSRLFTKEDLLCVYLSANKSSSQSQ 118

Query: 362 LKLAPVSIDREYLGHQIVRCPLQPRGSTVTITVKSNGNLPAGPTHHWDSLAYEAVIDRDN 183
            +L P  ID + +  QIVRCPL PRG TV++ +KS G +  GPTH WDSL YEA+IDRDN
Sbjct: 119 RRLPPNHIDGKDVDDQIVRCPLIPRGYTVSLALKSGGYIHPGPTHKWDSLVYEALIDRDN 178

Query: 182 TTIVFVKGLNLRPGRVSNASRFECVYGWDFSRRNFLLSSDVVSIAQEIVRCKTPLRVL 9
           TT+VFVKGLNLRP ++SNASRFECVYGWDF R  FLL S V+S+AQEIVRCKTPL VL
Sbjct: 179 TTVVFVKGLNLRPEKLSNASRFECVYGWDFRRPKFLLRSQVISMAQEIVRCKTPLSVL 236


>emb|CBI17696.3| unnamed protein product [Vitis vinifera]
          Length = 1019

 Score =  271 bits (694), Expect = 1e-70
 Identities = 139/236 (58%), Positives = 169/236 (71%), Gaps = 5/236 (2%)
 Frame = -3

Query: 701 AMKDRRKR-----GHFKPWKXXXXXXXXXXXFSGFTFSTLRLFFTERYHHPQLVSSWRTP 537
           AMK+RRKR     G F  +             +G TFST  +F  E++  P LVSSWR  
Sbjct: 33  AMKERRKRDAGSWGRF--FWCTFFVVFSCVVVTGVTFSTFSIF-GEKFR-PVLVSSWRKQ 88

Query: 536 AMEAISGDSPATPVLSVRETVIFPDQAVLFLKYPPSTPLFTKDDIDCIYISPNSSQPQLK 357
           AMEAI+G+S   P +S+RETVIFPDQ ++FLKYPPS  LFTKDD+DC+Y SPNSS   +K
Sbjct: 89  AMEAIAGESFIPPAISIRETVIFPDQELVFLKYPPSARLFTKDDLDCLYFSPNSSDSHIK 148

Query: 356 LAPVSIDREYLGHQIVRCPLQPRGSTVTITVKSNGNLPAGPTHHWDSLAYEAVIDRDNTT 177
           L P  +D E   HQIVRCP +PRG T+++ +KSN  L  GPTH WDSL YEA+IDRDNTT
Sbjct: 149 LPPEDVDGETRDHQIVRCPRRPRGFTLSLVLKSNALLRPGPTHQWDSLVYEALIDRDNTT 208

Query: 176 IVFVKGLNLRPGRVSNASRFECVYGWDFSRRNFLLSSDVVSIAQEIVRCKTPLRVL 9
           + FVKGLNLRP R S+ +RFECVYGWDF +  FLL S+VVSIAQE+VRC+TPL +L
Sbjct: 209 VAFVKGLNLRPDRASDPTRFECVYGWDFRKPRFLLRSEVVSIAQEVVRCRTPLSIL 264


>ref|XP_002270991.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Vitis vinifera]
          Length = 908

 Score =  270 bits (690), Expect = 4e-70
 Identities = 138/235 (58%), Positives = 168/235 (71%), Gaps = 5/235 (2%)
 Frame = -3

Query: 698 MKDRRKR-----GHFKPWKXXXXXXXXXXXFSGFTFSTLRLFFTERYHHPQLVSSWRTPA 534
           MK+RRKR     G F  +             +G TFST  +F  E++  P LVSSWR  A
Sbjct: 1   MKERRKRDAGSWGRF--FWCTFFVVFSCVVVTGVTFSTFSIF-GEKFR-PVLVSSWRKQA 56

Query: 533 MEAISGDSPATPVLSVRETVIFPDQAVLFLKYPPSTPLFTKDDIDCIYISPNSSQPQLKL 354
           MEAI+G+S   P +S+RETVIFPDQ ++FLKYPPS  LFTKDD+DC+Y SPNSS   +KL
Sbjct: 57  MEAIAGESFIPPAISIRETVIFPDQELVFLKYPPSARLFTKDDLDCLYFSPNSSDSHIKL 116

Query: 353 APVSIDREYLGHQIVRCPLQPRGSTVTITVKSNGNLPAGPTHHWDSLAYEAVIDRDNTTI 174
            P  +D E   HQIVRCP +PRG T+++ +KSN  L  GPTH WDSL YEA+IDRDNTT+
Sbjct: 117 PPEDVDGETRDHQIVRCPRRPRGFTLSLVLKSNALLRPGPTHQWDSLVYEALIDRDNTTV 176

Query: 173 VFVKGLNLRPGRVSNASRFECVYGWDFSRRNFLLSSDVVSIAQEIVRCKTPLRVL 9
            FVKGLNLRP R S+ +RFECVYGWDF +  FLL S+VVSIAQE+VRC+TPL +L
Sbjct: 177 AFVKGLNLRPDRASDPTRFECVYGWDFRKPRFLLRSEVVSIAQEVVRCRTPLSIL 231


>ref|XP_002526930.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|325530316|sp|B9SLR1.1|Y231_RICCO RecName:
           Full=UPF0392 protein RCOM_0530710
           gi|223533682|gb|EEF35417.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 552

 Score =  237 bits (604), Expect = 4e-60
 Identities = 126/238 (52%), Positives = 160/238 (67%), Gaps = 8/238 (3%)
 Frame = -3

Query: 698 MKDRRKRGHFKPWKXXXXXXXXXXXFSGFTFSTLRLFFTERYHHPQLVSSWRTPAMEA-- 525
           MKDRR+R      +              FT ST R  F      P++VS+WR PAMEA  
Sbjct: 1   MKDRRRRETVSWNRFFWCTLLLVLSCVLFTASTFREKF-----QPEIVSAWRQPAMEATT 55

Query: 524 --ISGDSPATPVLSVRETVIFPDQAVLFLKYPPSTPLFTKDDIDCIYISPNS---SQPQL 360
             +S +SPA P +S+RETV+ PDQ ++F+ YP S+ LFTK+D  C+Y S NS   S+ QL
Sbjct: 56  TIMSTNSPAKPSISIRETVMLPDQVLIFVNYPQSSRLFTKEDFSCVYFSRNSTSLSETQL 115

Query: 359 KLAPVSIDREYLGHQIVRCPLQPRGSTVTITVKSNGN-LPAGPTHHWDSLAYEAVIDRDN 183
           K  P  ID   + +QIVRCPL PRG +V++ +KS G  +  GPTH WDSL YEA+IDRDN
Sbjct: 116 KKPPNQIDGTDVNNQIVRCPLNPRGFSVSLELKSGGGYINPGPTHRWDSLVYEAMIDRDN 175

Query: 182 TTIVFVKGLNLRPGRVSNASRFECVYGWDFSRRNFLLSSDVVSIAQEIVRCKTPLRVL 9
           TT+VFVKG NLR  R+ NAS+FECVYGWDF +  F+L S+V+SIAQEIVRC+TPL +L
Sbjct: 176 TTVVFVKGFNLRADRIYNASKFECVYGWDFRKTKFVLRSNVISIAQEIVRCQTPLSIL 233


>gb|ADN34072.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]
          Length = 555

 Score =  211 bits (537), Expect = 2e-52
 Identities = 113/231 (48%), Positives = 147/231 (63%), Gaps = 1/231 (0%)
 Frame = -3

Query: 698 MKDRRKRGHFKPWKXXXXXXXXXXXFSGFTFSTLRLFFTERYHHPQLVSSWRTPAMEAIS 519
           M+DRRKR +   W             +   F+T R F +E      LV +   P  +A+ 
Sbjct: 1   MRDRRKR-NVVSWSALFWCTLFLVLLAFLLFTTSRFFSSE------LVHTLPNPLNKALY 53

Query: 518 GDSPATPVLSVRETVIFPDQAVLFLKYPPSTPLFTKDDIDCIYISPNSSQPQLKLAPVSI 339
            DS    + S++ETV  PDQA++FL +P +   F K+DI+C+Y + NSS P     P+ +
Sbjct: 54  DDSSLHFLSSLQETVTLPDQALVFLNHPQTVRPFPKEDINCVYFAANSSVPHRWRPPIDV 113

Query: 338 D-REYLGHQIVRCPLQPRGSTVTITVKSNGNLPAGPTHHWDSLAYEAVIDRDNTTIVFVK 162
           D  E+L  Q+VRCPL P G TV+I V+SN  L  G +H WD L YEA++DRDNTT+VF+K
Sbjct: 114 DGEEHLQKQMVRCPLPPPGFTVSIRVRSNPQLQGGNSHQWDFLVYEALVDRDNTTVVFIK 173

Query: 161 GLNLRPGRVSNASRFECVYGWDFSRRNFLLSSDVVSIAQEIVRCKTPLRVL 9
           GL LRP RVSNAS+FECVYGWDF +  FLL S+V+SIAQEI RC TPL VL
Sbjct: 174 GLGLRPERVSNASKFECVYGWDFRKIKFLLRSNVISIAQEIARCTTPLSVL 224


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