BLASTX nr result

ID: Panax21_contig00033685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033685
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282796.1| PREDICTED: replication factor A protein 2 [V...   196   2e-48
ref|XP_004136317.1| PREDICTED: replication protein A 32 kDa subu...   192   2e-47
ref|XP_002330767.1| predicted protein [Populus trichocarpa] gi|2...   187   6e-46
emb|CBI17841.3| unnamed protein product [Vitis vinifera]              182   3e-44
ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subu...   177   1e-42

>ref|XP_002282796.1| PREDICTED: replication factor A protein 2 [Vitis vinifera]
           gi|296081770|emb|CBI20775.3| unnamed protein product
           [Vitis vinifera]
          Length = 268

 Score =  196 bits (497), Expect = 2e-48
 Identities = 102/167 (61%), Positives = 123/167 (73%)
 Frame = -3

Query: 519 KEMSVIQDGIYVRVNGRLRSFQGKKQIVVFSVRPVTNFDEITYHFIECIHFHLQNSRVQL 340
           +EM  I DGIYVR+NG LRS  G +Q+V FSVRPVTNFDEI +HFIE IH HL+NS+ +L
Sbjct: 107 REMENISDGIYVRLNGHLRSSGGNRQLVAFSVRPVTNFDEIAFHFIEVIHLHLKNSKTRL 166

Query: 339 QGDTSTQSEINPALNTPSQKGINGSNAYQASVPNVLSVDGLKGFDQMVLDYLQRPSSFGS 160
             D  TQ  ++ ++ T S      S+   A      SVDG+KG DQMVLDYLQ+PS++  
Sbjct: 167 PSDALTQP-LSASVKTESTGYQTPSSQLSAQ-----SVDGVKGLDQMVLDYLQQPSNYDR 220

Query: 159 EKGVHRDVIHQELKIPLEKLMESIHTLEEEGLIYSTIDEFHYKSTTS 19
           EKG+HRD + Q+LKI  EK+MESI TLEEEGLIYSTIDEFHYKSTTS
Sbjct: 221 EKGIHRDELSQQLKISTEKIMESIRTLEEEGLIYSTIDEFHYKSTTS 267


>ref|XP_004136317.1| PREDICTED: replication protein A 32 kDa subunit A-like [Cucumis
           sativus] gi|449519474|ref|XP_004166760.1| PREDICTED:
           replication protein A 32 kDa subunit A-like [Cucumis
           sativus]
          Length = 271

 Score =  192 bits (488), Expect = 2e-47
 Identities = 95/166 (57%), Positives = 129/166 (77%), Gaps = 3/166 (1%)
 Frame = -3

Query: 516 EMSVIQDGIYVRVNGRLRSFQGKKQIVVFSVRPVTNFDEITYHFIECIHFHLQNSRVQ-L 340
           +M  IQDG+YVRVNG L+ FQ  KQI  FSVRPVTNFDEIT+HFIECIH HL+NS++Q L
Sbjct: 104 QMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNL 163

Query: 339 QGDTSTQSEINPAL-NTPSQKGINGSNAYQASVPNVL-SVDGLKGFDQMVLDYLQRPSSF 166
           +G+ STQ + + ++  TP Q G NG +   +++P+   +VD  K  D++VLDYLQ PSS 
Sbjct: 164 KGNGSTQLQTSDSIVKTPVQNGSNGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSV 223

Query: 165 GSEKGVHRDVIHQELKIPLEKLMESIHTLEEEGLIYSTIDEFHYKS 28
             E+G+H+D + Q+LK+P+EK+++SI +LE+EGLIYSTIDEFH+KS
Sbjct: 224 AKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKS 269


>ref|XP_002330767.1| predicted protein [Populus trichocarpa] gi|222872569|gb|EEF09700.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score =  187 bits (476), Expect = 6e-46
 Identities = 100/169 (59%), Positives = 123/169 (72%), Gaps = 5/169 (2%)
 Frame = -3

Query: 516 EMSVIQDGIYVRVNGRLRSFQGKKQIVVFSVRPVTNFDEITYHFIECIHFHLQNSRVQLQ 337
           EM  +QDG+YVRV G LR FQ  KQ+V FSVRPVTNFDEIT+HFI+CIH HLQNS+  LQ
Sbjct: 123 EMEAVQDGMYVRVIGHLRVFQDVKQLVAFSVRPVTNFDEITFHFIDCIHSHLQNSK--LQ 180

Query: 336 GDTSTQSE-INPALNTPSQKGINGSNAYQASVPNVLS----VDGLKGFDQMVLDYLQRPS 172
           G  STQ   +  ++NTP + G       Q    N++S    VDGLK  DQ+VLD LQ+ S
Sbjct: 181 GGASTQLHMVESSMNTPVRNG-------QTFTSNLMSKQFDVDGLKDCDQLVLDRLQQSS 233

Query: 171 SFGSEKGVHRDVIHQELKIPLEKLMESIHTLEEEGLIYSTIDEFHYKST 25
           S G EKG+H D + Q+LK+P+EK+ ESI +LE+EGLIYSTIDEFHYK+T
Sbjct: 234 SIGQEKGMHMDELCQQLKLPMEKIKESIRSLEDEGLIYSTIDEFHYKAT 282


>emb|CBI17841.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score =  182 bits (461), Expect = 3e-44
 Identities = 93/169 (55%), Positives = 123/169 (72%), Gaps = 4/169 (2%)
 Frame = -3

Query: 519 KEMSVIQDGIYVRVNGRLRSFQGKKQIVVFSVRPVTNFDEITYHFIECIHFHLQNSRVQL 340
           KEM  I DG+YVRV+G L+ FQGK+ + VFS+RPVT+F+EI  HFIECI+ H+ N++ ++
Sbjct: 113 KEMEGILDGMYVRVHGHLKGFQGKRHLNVFSIRPVTDFNEIASHFIECIYVHIYNTKSRV 172

Query: 339 QGDTSTQSEI-NPALNTPSQKGINGSNAYQASVPNVLSVD---GLKGFDQMVLDYLQRPS 172
           Q    TQS + NPA+ TP +        YQAS PN  S     GLKG DQ+V+DYLQ+P 
Sbjct: 173 QAGGPTQSHVTNPAIGTPLK-------GYQASQPNQFSGQYGAGLKGVDQLVIDYLQQPQ 225

Query: 171 SFGSEKGVHRDVIHQELKIPLEKLMESIHTLEEEGLIYSTIDEFHYKST 25
           S   ++GV RD + Q+L +P++K+MESI +LEEEGLIYSTIDE+HYKST
Sbjct: 226 SLARDQGVGRDELAQQLNVPVDKIMESIRSLEEEGLIYSTIDEWHYKST 274


>ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subunit [Vitis vinifera]
          Length = 275

 Score =  177 bits (448), Expect = 1e-42
 Identities = 93/169 (55%), Positives = 122/169 (72%), Gaps = 4/169 (2%)
 Frame = -3

Query: 519 KEMSVIQDGIYVRVNGRLRSFQGKKQIVVFSVRPVTNFDEITYHFIECIHFHLQNSRVQL 340
           KEM  I DG+YVRV+G L+ FQGK+ + VFS+RPVT+F+EI  HFIECI+ H+ N++ + 
Sbjct: 113 KEMEGILDGMYVRVHGHLKGFQGKRHLNVFSIRPVTDFNEIASHFIECIYVHIYNTKSRA 172

Query: 339 QGDTSTQSEI-NPALNTPSQKGINGSNAYQASVPNVLSVD---GLKGFDQMVLDYLQRPS 172
            G T  QS + NPA+ TP +        YQAS PN  S     GLKG DQ+V+DYLQ+P 
Sbjct: 173 GGPT--QSHVTNPAIGTPLK-------GYQASQPNQFSGQYGAGLKGVDQLVIDYLQQPQ 223

Query: 171 SFGSEKGVHRDVIHQELKIPLEKLMESIHTLEEEGLIYSTIDEFHYKST 25
           S   ++GV RD + Q+L +P++K+MESI +LEEEGLIYSTIDE+HYKST
Sbjct: 224 SLARDQGVGRDELAQQLNVPVDKIMESIRSLEEEGLIYSTIDEWHYKST 272