BLASTX nr result
ID: Panax21_contig00033685
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00033685 (521 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282796.1| PREDICTED: replication factor A protein 2 [V... 196 2e-48 ref|XP_004136317.1| PREDICTED: replication protein A 32 kDa subu... 192 2e-47 ref|XP_002330767.1| predicted protein [Populus trichocarpa] gi|2... 187 6e-46 emb|CBI17841.3| unnamed protein product [Vitis vinifera] 182 3e-44 ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subu... 177 1e-42 >ref|XP_002282796.1| PREDICTED: replication factor A protein 2 [Vitis vinifera] gi|296081770|emb|CBI20775.3| unnamed protein product [Vitis vinifera] Length = 268 Score = 196 bits (497), Expect = 2e-48 Identities = 102/167 (61%), Positives = 123/167 (73%) Frame = -3 Query: 519 KEMSVIQDGIYVRVNGRLRSFQGKKQIVVFSVRPVTNFDEITYHFIECIHFHLQNSRVQL 340 +EM I DGIYVR+NG LRS G +Q+V FSVRPVTNFDEI +HFIE IH HL+NS+ +L Sbjct: 107 REMENISDGIYVRLNGHLRSSGGNRQLVAFSVRPVTNFDEIAFHFIEVIHLHLKNSKTRL 166 Query: 339 QGDTSTQSEINPALNTPSQKGINGSNAYQASVPNVLSVDGLKGFDQMVLDYLQRPSSFGS 160 D TQ ++ ++ T S S+ A SVDG+KG DQMVLDYLQ+PS++ Sbjct: 167 PSDALTQP-LSASVKTESTGYQTPSSQLSAQ-----SVDGVKGLDQMVLDYLQQPSNYDR 220 Query: 159 EKGVHRDVIHQELKIPLEKLMESIHTLEEEGLIYSTIDEFHYKSTTS 19 EKG+HRD + Q+LKI EK+MESI TLEEEGLIYSTIDEFHYKSTTS Sbjct: 221 EKGIHRDELSQQLKISTEKIMESIRTLEEEGLIYSTIDEFHYKSTTS 267 >ref|XP_004136317.1| PREDICTED: replication protein A 32 kDa subunit A-like [Cucumis sativus] gi|449519474|ref|XP_004166760.1| PREDICTED: replication protein A 32 kDa subunit A-like [Cucumis sativus] Length = 271 Score = 192 bits (488), Expect = 2e-47 Identities = 95/166 (57%), Positives = 129/166 (77%), Gaps = 3/166 (1%) Frame = -3 Query: 516 EMSVIQDGIYVRVNGRLRSFQGKKQIVVFSVRPVTNFDEITYHFIECIHFHLQNSRVQ-L 340 +M IQDG+YVRVNG L+ FQ KQI FSVRPVTNFDEIT+HFIECIH HL+NS++Q L Sbjct: 104 QMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNL 163 Query: 339 QGDTSTQSEINPAL-NTPSQKGINGSNAYQASVPNVL-SVDGLKGFDQMVLDYLQRPSSF 166 +G+ STQ + + ++ TP Q G NG + +++P+ +VD K D++VLDYLQ PSS Sbjct: 164 KGNGSTQLQTSDSIVKTPVQNGSNGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSV 223 Query: 165 GSEKGVHRDVIHQELKIPLEKLMESIHTLEEEGLIYSTIDEFHYKS 28 E+G+H+D + Q+LK+P+EK+++SI +LE+EGLIYSTIDEFH+KS Sbjct: 224 AKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKS 269 >ref|XP_002330767.1| predicted protein [Populus trichocarpa] gi|222872569|gb|EEF09700.1| predicted protein [Populus trichocarpa] Length = 282 Score = 187 bits (476), Expect = 6e-46 Identities = 100/169 (59%), Positives = 123/169 (72%), Gaps = 5/169 (2%) Frame = -3 Query: 516 EMSVIQDGIYVRVNGRLRSFQGKKQIVVFSVRPVTNFDEITYHFIECIHFHLQNSRVQLQ 337 EM +QDG+YVRV G LR FQ KQ+V FSVRPVTNFDEIT+HFI+CIH HLQNS+ LQ Sbjct: 123 EMEAVQDGMYVRVIGHLRVFQDVKQLVAFSVRPVTNFDEITFHFIDCIHSHLQNSK--LQ 180 Query: 336 GDTSTQSE-INPALNTPSQKGINGSNAYQASVPNVLS----VDGLKGFDQMVLDYLQRPS 172 G STQ + ++NTP + G Q N++S VDGLK DQ+VLD LQ+ S Sbjct: 181 GGASTQLHMVESSMNTPVRNG-------QTFTSNLMSKQFDVDGLKDCDQLVLDRLQQSS 233 Query: 171 SFGSEKGVHRDVIHQELKIPLEKLMESIHTLEEEGLIYSTIDEFHYKST 25 S G EKG+H D + Q+LK+P+EK+ ESI +LE+EGLIYSTIDEFHYK+T Sbjct: 234 SIGQEKGMHMDELCQQLKLPMEKIKESIRSLEDEGLIYSTIDEFHYKAT 282 >emb|CBI17841.3| unnamed protein product [Vitis vinifera] Length = 277 Score = 182 bits (461), Expect = 3e-44 Identities = 93/169 (55%), Positives = 123/169 (72%), Gaps = 4/169 (2%) Frame = -3 Query: 519 KEMSVIQDGIYVRVNGRLRSFQGKKQIVVFSVRPVTNFDEITYHFIECIHFHLQNSRVQL 340 KEM I DG+YVRV+G L+ FQGK+ + VFS+RPVT+F+EI HFIECI+ H+ N++ ++ Sbjct: 113 KEMEGILDGMYVRVHGHLKGFQGKRHLNVFSIRPVTDFNEIASHFIECIYVHIYNTKSRV 172 Query: 339 QGDTSTQSEI-NPALNTPSQKGINGSNAYQASVPNVLSVD---GLKGFDQMVLDYLQRPS 172 Q TQS + NPA+ TP + YQAS PN S GLKG DQ+V+DYLQ+P Sbjct: 173 QAGGPTQSHVTNPAIGTPLK-------GYQASQPNQFSGQYGAGLKGVDQLVIDYLQQPQ 225 Query: 171 SFGSEKGVHRDVIHQELKIPLEKLMESIHTLEEEGLIYSTIDEFHYKST 25 S ++GV RD + Q+L +P++K+MESI +LEEEGLIYSTIDE+HYKST Sbjct: 226 SLARDQGVGRDELAQQLNVPVDKIMESIRSLEEEGLIYSTIDEWHYKST 274 >ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subunit [Vitis vinifera] Length = 275 Score = 177 bits (448), Expect = 1e-42 Identities = 93/169 (55%), Positives = 122/169 (72%), Gaps = 4/169 (2%) Frame = -3 Query: 519 KEMSVIQDGIYVRVNGRLRSFQGKKQIVVFSVRPVTNFDEITYHFIECIHFHLQNSRVQL 340 KEM I DG+YVRV+G L+ FQGK+ + VFS+RPVT+F+EI HFIECI+ H+ N++ + Sbjct: 113 KEMEGILDGMYVRVHGHLKGFQGKRHLNVFSIRPVTDFNEIASHFIECIYVHIYNTKSRA 172 Query: 339 QGDTSTQSEI-NPALNTPSQKGINGSNAYQASVPNVLSVD---GLKGFDQMVLDYLQRPS 172 G T QS + NPA+ TP + YQAS PN S GLKG DQ+V+DYLQ+P Sbjct: 173 GGPT--QSHVTNPAIGTPLK-------GYQASQPNQFSGQYGAGLKGVDQLVIDYLQQPQ 223 Query: 171 SFGSEKGVHRDVIHQELKIPLEKLMESIHTLEEEGLIYSTIDEFHYKST 25 S ++GV RD + Q+L +P++K+MESI +LEEEGLIYSTIDE+HYKST Sbjct: 224 SLARDQGVGRDELAQQLNVPVDKIMESIRSLEEEGLIYSTIDEWHYKST 272