BLASTX nr result

ID: Panax21_contig00033677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033677
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|1V03|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhu...   166   3e-39
ref|XP_002442029.1| hypothetical protein SORBIDRAFT_08g007570 [S...   164   6e-39
pdb|1V02|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhu...   161   5e-38
pdb|1V02|E Chain E, Crystal Structure Of The Sorghum Bicolor Dhu...   161   5e-38
ref|XP_002442031.1| hypothetical protein SORBIDRAFT_08g007586 [S...   161   6e-38

>pdb|1V03|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
          Length = 565

 Score =  166 bits (419), Expect = 3e-39
 Identities = 82/146 (56%), Positives = 103/146 (70%), Gaps = 8/146 (5%)
 Frame = +3

Query: 114 KRDYFSSNFQFGASTSAIQTEGNLNVGGRGPSTLDEF--------IKADEGFNATDSYNL 269
           +RD+F  +F FGA+TSA Q EG  N  G+GPST D F        +    G  A DSY++
Sbjct: 72  RRDWFPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFPEWIVDRSNGDVAADSYHM 131

Query: 270 YLEDVKALKGMRMTTYRFSISWTRILPKGNLEGGINQEGINFYNKLIDELVDNGITPYVT 449
           Y EDV+ LK M M  YRFSISW RILPKG L GGIN++G+ +YNKLID L++NGI PY+T
Sbjct: 132 YAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKGVEYYNKLIDLLLENGIEPYIT 191

Query: 450 LNHFDIPKALVESYFSFLDRRIIKDF 527
           + H+D P+ALVE+Y  FLD RIIKD+
Sbjct: 192 IFHWDTPQALVEAYGGFLDERIIKDY 217


>ref|XP_002442029.1| hypothetical protein SORBIDRAFT_08g007570 [Sorghum bicolor]
           gi|241942722|gb|EES15867.1| hypothetical protein
           SORBIDRAFT_08g007570 [Sorghum bicolor]
          Length = 565

 Score =  164 bits (416), Expect = 6e-39
 Identities = 81/146 (55%), Positives = 103/146 (70%), Gaps = 8/146 (5%)
 Frame = +3

Query: 114 KRDYFSSNFQFGASTSAIQTEGNLNVGGRGPSTLDEF--------IKADEGFNATDSYNL 269
           +RD+F  +F FGA+TSA Q EG  N  G+GPST D F        +    G  A DSY++
Sbjct: 72  RRDWFPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFPEWIVDRSNGDVAADSYHM 131

Query: 270 YLEDVKALKGMRMTTYRFSISWTRILPKGNLEGGINQEGINFYNKLIDELVDNGITPYVT 449
           Y EDV+ LK M M  YRFSISW RILPKG L GGIN++G+ +YNKLID L++NGI PY+T
Sbjct: 132 YAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKGVEYYNKLIDLLLENGIEPYIT 191

Query: 450 LNHFDIPKALVESYFSFLDRRIIKDF 527
           + H+D P+ALV++Y  FLD RIIKD+
Sbjct: 192 IFHWDTPQALVDAYGGFLDERIIKDY 217


>pdb|1V02|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
           gi|49259426|pdb|1V02|B Chain B, Crystal Structure Of The
           Sorghum Bicolor Dhurrinase 1 gi|49259427|pdb|1V02|C
           Chain C, Crystal Structure Of The Sorghum Bicolor
           Dhurrinase 1 gi|49259428|pdb|1V02|D Chain D, Crystal
           Structure Of The Sorghum Bicolor Dhurrinase 1
           gi|49259430|pdb|1V02|F Chain F, Crystal Structure Of The
           Sorghum Bicolor Dhurrinase 1
          Length = 565

 Score =  161 bits (408), Expect = 5e-38
 Identities = 80/146 (54%), Positives = 102/146 (69%), Gaps = 8/146 (5%)
 Frame = +3

Query: 114 KRDYFSSNFQFGASTSAIQTEGNLNVGGRGPSTLDEF--------IKADEGFNATDSYNL 269
           +RD+F  +F FGA+TSA Q EG  N  G+GPST D F        +    G  A DSY++
Sbjct: 72  RRDWFPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFPEWIVDRSNGDVAADSYHM 131

Query: 270 YLEDVKALKGMRMTTYRFSISWTRILPKGNLEGGINQEGINFYNKLIDELVDNGITPYVT 449
           Y EDV+ LK M M  YRFSISW RILPKG L GGIN++ + +YNKLID L++NGI PY+T
Sbjct: 132 YAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYIT 191

Query: 450 LNHFDIPKALVESYFSFLDRRIIKDF 527
           + H+D P+ALV++Y  FLD RIIKD+
Sbjct: 192 IFHWDTPQALVDAYGGFLDERIIKDY 217


>pdb|1V02|E Chain E, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
          Length = 565

 Score =  161 bits (408), Expect = 5e-38
 Identities = 80/146 (54%), Positives = 102/146 (69%), Gaps = 8/146 (5%)
 Frame = +3

Query: 114 KRDYFSSNFQFGASTSAIQTEGNLNVGGRGPSTLDEF--------IKADEGFNATDSYNL 269
           +RD+F  +F FGA+TSA Q EG  N  G+GPST D F        +    G  A DSY++
Sbjct: 72  RRDWFPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFPEWIVDRSNGDVAADSYHM 131

Query: 270 YLEDVKALKGMRMTTYRFSISWTRILPKGNLEGGINQEGINFYNKLIDELVDNGITPYVT 449
           Y EDV+ LK M M  YRFSISW RILPKG L GGIN++ + +YNKLID L++NGI PY+T
Sbjct: 132 YAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYIT 191

Query: 450 LNHFDIPKALVESYFSFLDRRIIKDF 527
           + H+D P+ALV++Y  FLD RIIKD+
Sbjct: 192 IFHWDTPQALVDAYGGFLDERIIKDY 217


>ref|XP_002442031.1| hypothetical protein SORBIDRAFT_08g007586 [Sorghum bicolor]
           gi|241942724|gb|EES15869.1| hypothetical protein
           SORBIDRAFT_08g007586 [Sorghum bicolor]
          Length = 567

 Score =  161 bits (407), Expect = 6e-38
 Identities = 78/146 (53%), Positives = 103/146 (70%), Gaps = 8/146 (5%)
 Frame = +3

Query: 114 KRDYFSSNFQFGASTSAIQTEGNLNVGGRGPSTLDEF--------IKADEGFNATDSYNL 269
           +RD+F  +F FGA+T++ Q EG  N  G+GPST D F        +    G  A DSY++
Sbjct: 74  RRDWFPPSFLFGAATASYQIEGAWNEDGKGPSTWDHFCHNFPEWIVDRSNGDVAADSYHM 133

Query: 270 YLEDVKALKGMRMTTYRFSISWTRILPKGNLEGGINQEGINFYNKLIDELVDNGITPYVT 449
           Y EDV+ LK M M  YRFSISW RILPKG L GGIN++G+ +YNKLID L++NG+ PY+T
Sbjct: 134 YAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKGVEYYNKLIDLLLENGMEPYIT 193

Query: 450 LNHFDIPKALVESYFSFLDRRIIKDF 527
           + H+D P+ALV++Y  FLD RIIKD+
Sbjct: 194 IFHWDAPQALVDTYGGFLDERIIKDY 219


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