BLASTX nr result

ID: Panax21_contig00033663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033663
         (872 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   119   1e-24
ref|XP_003635813.1| F-box/kelch-repeat protein [Medicago truncat...   110   5e-22
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...   109   7e-22
ref|XP_003599218.1| F-box/kelch-repeat protein [Medicago truncat...   103   5e-20
ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...   102   1e-19

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score =  119 bits (297), Expect = 1e-24
 Identities = 91/298 (30%), Positives = 135/298 (45%), Gaps = 26/298 (8%)
 Frame = +3

Query: 57  MANLPVEIITYILLRLPIKTLCGLKCVCKSWRILISTPHFTKSHQKQSTNTHDGDAQLLI 236
           M+ LP+E+I  IL RLP K L   + V K W  LI  P+F K H K S +T   +  +++
Sbjct: 1   MSGLPLEMIAEILCRLPAKELLCCRSVSKPWCALIDGPNFVKLHLKHSMDT-SSNLYIIL 59

Query: 237 RTESLFTVSTNEXXXXXXXXXXXXXXRNRNPNCF---VDVXXXXXXXXXXXQYPETFFLL 407
           RT S       E               N    C+   + V              +   + 
Sbjct: 60  RTTSHVHYMDFEQNLVLNDCVTLKEL-NHPLMCYNHGIKVLGSVNGLLCISNVVDDIAVW 118

Query: 408 NPTTRESITMRPDPDYPVKL-------------YGFGYVSLADDYKVIKIAA-------- 524
           NP+TR+    R  P  P++L             +GFGY S+ DDYK+++IA         
Sbjct: 119 NPSTRKH---RVVPFLPIELKRYFGTKSCSVYVFGFGYDSVRDDYKLVRIAQFGGGGKRS 175

Query: 525 -SSMVRVYSTKTNSWKRVQCDFPYSFDAYSGKKPACVDGVVHWLVSD-PNTFLRTAIVGF 698
             S V+VYS +  SW+R+  D PY    Y G      +G +HW+V + P + +   +V  
Sbjct: 176 FESEVKVYSLRKQSWRRIG-DMPYCVH-YPGANGVFANGALHWVVGENPESNVANIVVAL 233

Query: 699 DFNEEKFKEIPLPDKVKPNSKMDIFPGNLGVLRGLLCVSFEIYPERLELWLMLEYGVR 872
           D   E ++E+  P+    N  +D     LGVLRG LC       ER+++W+M EYGV+
Sbjct: 234 DLGVEDYREVLQPEYKDKNFYID-----LGVLRGCLCFLANFLGERVDVWMMKEYGVK 286


>ref|XP_003635813.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355501748|gb|AES82951.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 385

 Score =  110 bits (274), Expect = 5e-22
 Identities = 89/293 (30%), Positives = 135/293 (46%), Gaps = 23/293 (7%)
 Frame = +3

Query: 57  MANLPVEIITYILLRLPIKTLCGLKCVCKSWRILISTPHFTKSHQKQSTNTH-------D 215
           +  LP ++I+ IL RLP+K L  L C+CKSW+ LIS P FTK H + ST  H       D
Sbjct: 28  LPTLPFDVISEILCRLPVKLLLQLSCLCKSWKSLISDPKFTKKHLRMSTTLHHIMVTSTD 87

Query: 216 GDAQLLI---RTESLFTVSTNEXXXXXXXXXXXXXXRNRNPNCFVDVXXXXXXXXXXXQY 386
              +L++      S+ ++S                   R+  C  D             +
Sbjct: 88  DSHELVLFGSPISSVLSISRVTQTQLSYPSSLTFEYGERSDVCSCDGILCINVC-----F 142

Query: 387 PETFFLLNPTTRESITMRPDPDY-----PVKLYGFGYVSLADDYKVIKIAA---SSMVRV 542
             +  L NP+ R+   + P         P  +Y FGY    D+YK+I +++    S V +
Sbjct: 143 HPSAILWNPSIRKFKVLPPLEKIQCKRVPFSIYSFGYDHFIDNYKIIVVSSCINKSEVCI 202

Query: 543 YSTKTNSWKRVQCDFPYSFDAYSGKKPACVDGVVHWLV---SDPNTFLRTAIVGFDFNEE 713
            +  T+ W+R++ DFPY  D    +    V G V+WL    S  N+ LR AIV  D   E
Sbjct: 203 LTLGTDYWRRIK-DFPY--DGPLHESGIFVSGTVNWLAIDNSSSNSSLR-AIVSLDLENE 258

Query: 714 KFKEIPLPDKVKPNSKMDIFPGNLGVLRGLLCV--SFEIYPERLELWLMLEYG 866
            +K++P PD       ++     LGVL   LC+  S +I+    ++W+M EYG
Sbjct: 259 SYKKLPHPD-------LENELWTLGVLTDCLCIFTSSDIF---FDIWVMKEYG 301


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  109 bits (273), Expect = 7e-22
 Identities = 91/300 (30%), Positives = 130/300 (43%), Gaps = 34/300 (11%)
 Frame = +3

Query: 75  EIITYILLRLPIKTLCGLKCVCKSWRILISTPHFTKSHQKQSTNTHDGDAQLLIRTESLF 254
           EI   IL RLP+K+L   +CV KSW   I +P+F  +H K+S+  H     +L    +L 
Sbjct: 6   EITADILSRLPVKSLKRFRCVSKSWCKEIDSPYFINTHLKRSSQAHTHLNLILRDATNLC 65

Query: 255 TVSTNEXXXXXXXXXXXXXXRNRNPNCFVDVXXXXXXXXXXXQYPETFFLLNPTTRESIT 434
           TV  +                 ++ +C  +V               +  L NP+TRE   
Sbjct: 66  TVDLDSPDFTSIELKNNPL---KSDDCATEVMGSCNGLLALLNSDFSIALYNPSTREKKM 122

Query: 435 MRPDP-DYPVKL-----------YGFGYVSLADDYKVIKIA----------ASSMVRVYS 548
           +   P + P  L           YGFG+  + +DYKV++                V+VYS
Sbjct: 123 IPVSPLELPNDLDDSKVSSLFNFYGFGHDPINEDYKVVRFIHFYGDSPDGFFHCEVKVYS 182

Query: 549 TKTNSWKRVQCDFPYS--FDAYSGKKPAC-------VDGVVHW---LVSDPNTFLRTAIV 692
            K+NSWKR+  D+PY   F       P C        +  VHW   +V          IV
Sbjct: 183 LKSNSWKRID-DYPYDLRFILPPDYHPRCRRGYGVFANSAVHWKATVVGKGKENGSDLIV 241

Query: 693 GFDFNEEKFKEIPLPDKVKPNSKMDIFPGNLGVLRGLLCVSFEIYPERLELWLMLEYGVR 872
            FD   E+FK IP PD      +M     N+GVL G LCV      +++E+W+M EYGV+
Sbjct: 242 AFDLGAEEFKIIPQPDYSSNEHEM-----NVGVLGGCLCVFCNKNCKQVEIWVMKEYGVK 296


>ref|XP_003599218.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355488266|gb|AES69469.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 372

 Score =  103 bits (257), Expect = 5e-20
 Identities = 80/280 (28%), Positives = 124/280 (44%), Gaps = 10/280 (3%)
 Frame = +3

Query: 57  MANLPVEIITYILLRLPIKTLCGLKCVCKSWRILISTPHFTKSHQKQSTNTH-------D 215
           +  LP ++I  IL RLP+K L  L+CVCK +  LIS P F K+H + ST  H       +
Sbjct: 17  LPTLPFDLIAEILCRLPVKFLFQLRCVCKFFHSLISDPKFAKNHLQLSTKRHHLMIASMN 76

Query: 216 GDAQLLIRTESLFTVSTNEXXXXXXXXXXXXXXRNRNPNCFVDVXXXXXXXXXXXQYPET 395
             A L++    + +V +                 N +   +VDV             P +
Sbjct: 77  NLADLVLYDSPIHSVFSTSTIVTQTQLYPPNTLTNGSK--YVDVLCSCDGIFCCFLKPGS 134

Query: 396 FFLLNPTTRESITMRP---DPDYPVKLYGFGYVSLADDYKVIKIAASSMVRVYSTKTNSW 566
           + L NP+ R+   + P      +      FGY    D YKVI  A+ + V VY+  T+ W
Sbjct: 135 YVLWNPSIRKFKLLPPLEIRRRHDTFFISFGYDHFIDKYKVIDFASKNDVFVYTLGTDYW 194

Query: 567 KRVQCDFPYSFDAYSGKKPACVDGVVHWLVSDPNTFLRTAIVGFDFNEEKFKEIPLPDKV 746
            R++ D P+ +  Y   +   V G V+W     +      I+     +E ++++ LPD  
Sbjct: 195 TRIE-DIPHDYRIYG--RGVFVSGTVNWYAEGESDDYLHFILSLALEDESYRQLFLPD-- 249

Query: 747 KPNSKMDIFPGNLGVLRGLLCVSFEIYPERLELWLMLEYG 866
              S  + +   L VLR  LCV FE     L +W+M +YG
Sbjct: 250 ---SDNESYSWRLDVLRDCLCV-FETSDMFLNVWIMNKYG 285


>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score =  102 bits (253), Expect = 1e-19
 Identities = 83/295 (28%), Positives = 125/295 (42%), Gaps = 25/295 (8%)
 Frame = +3

Query: 57  MANLPVEIITYILLRLPIKTLCGLKCVCKSWRILISTPHFTKSHQKQSTNTHDGDAQLLI 236
           MA+LP E+ T IL R+P K L  L+  CK WR LI +  F   H  +S      D+ +++
Sbjct: 1   MADLPTEVTTEILSRVPAKPLLRLRSTCKWWRNLIDSTDFIFLHLSKSR-----DSVIIL 55

Query: 237 RTES-LFTVSTNEXXXXXXXXXXXXXXRNRNPNCFVDVXXXXXXXXXXXQYPETFFLLNP 413
           R  S L+ +  N                NR     + V              +     NP
Sbjct: 56  RQHSRLYELDLNSMDRVKELDHPLMCYSNR-----IKVLGSCNGLLCICNIADDIAFWNP 110

Query: 414 TTRESITMRPDP--------------DYPVKLYGFGYVSLADDYKVIKI---------AA 524
           T R+   +  +P                   +YGFGY S  DDYK++ I         + 
Sbjct: 111 TIRKHRIIPSEPLIRKETNENNTITTLLAAHVYGFGYDSATDDYKLVSISYFVDLHNRSF 170

Query: 525 SSMVRVYSTKTNSWKRVQCDFPYSFDAYSGKKPACVDGVVHWLVS-DPNTFLRTAIVGFD 701
            S V++Y+ +T+ WK +    PY+    +      V G +HW+V+ D     R  IV FD
Sbjct: 171 DSHVKIYTMRTDVWKTLP-SMPYAL-CCARTMGVFVSGALHWVVTRDLEPESRDLIVAFD 228

Query: 702 FNEEKFKEIPLPDKVKPNSKMDIFPGNLGVLRGLLCVSFEIYPERLELWLMLEYG 866
              E F+E+ LP  V     MD+      +LRG+LC+      +  ++W+M EYG
Sbjct: 229 LRFEVFREVALPGTVDGKFDMDV-----ALLRGMLCIIENRGSDGFDVWVMREYG 278


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