BLASTX nr result

ID: Panax21_contig00033545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033545
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152844.1| PREDICTED: glycine--tRNA ligase 1, mitochond...   210   1e-52
ref|XP_004170329.1| PREDICTED: LOW QUALITY PROTEIN: glycine--tRN...   207   9e-52
ref|XP_002280957.1| PREDICTED: glycyl-tRNA synthetase 1, mitocho...   203   1e-50
emb|CBI15763.3| unnamed protein product [Vitis vinifera]              203   1e-50
ref|XP_002304639.1| predicted protein [Populus trichocarpa] gi|2...   202   3e-50

>ref|XP_004152844.1| PREDICTED: glycine--tRNA ligase 1, mitochondrial-like [Cucumis
           sativus]
          Length = 729

 Score =  210 bits (534), Expect = 1e-52
 Identities = 102/118 (86%), Positives = 109/118 (92%)
 Frame = +1

Query: 4   VIQALEAMDEKEAMNMKVALESNGEIEFNICTLGRMVSIKKSMVLISKEKKKEHHRVFTP 183
           V++ALEAM EKEA+ MK ALESNGE+EF +CTLG+ VSIKKSMV ISKEKKKEH RVFTP
Sbjct: 512 VVEALEAMKEKEALEMKAALESNGEVEFYVCTLGKNVSIKKSMVAISKEKKKEHQRVFTP 571

Query: 184 SVIEPSFGIGRIIYCLFEHSFYTRPSKAGYEQLNVFRFPPLVAPIKCTVFPLVQNQQY 357
           SVIEPSFGIGRIIYCLFEHS+Y RPSKAG EQLNVFRFPPLVAPIKCTVFPLVQNQQY
Sbjct: 572 SVIEPSFGIGRIIYCLFEHSYYMRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQY 629


>ref|XP_004170329.1| PREDICTED: LOW QUALITY PROTEIN: glycine--tRNA ligase 1,
           mitochondrial-like [Cucumis sativus]
          Length = 729

 Score =  207 bits (526), Expect = 9e-52
 Identities = 101/118 (85%), Positives = 108/118 (91%)
 Frame = +1

Query: 4   VIQALEAMDEKEAMNMKVALESNGEIEFNICTLGRMVSIKKSMVLISKEKKKEHHRVFTP 183
           V++ALEAM EKEA+ MK ALESNGE+EF +CTLG+ VSIKKSMV ISKEKKKEH RVFTP
Sbjct: 512 VVEALEAMKEKEALEMKAALESNGEVEFYVCTLGKNVSIKKSMVAISKEKKKEHQRVFTP 571

Query: 184 SVIEPSFGIGRIIYCLFEHSFYTRPSKAGYEQLNVFRFPPLVAPIKCTVFPLVQNQQY 357
           SVIEPSFGIGRIIYCLFEHS+Y R SKAG EQLNVFRFPPLVAPIKCTVFPLVQNQQY
Sbjct: 572 SVIEPSFGIGRIIYCLFEHSYYMRSSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQY 629


>ref|XP_002280957.1| PREDICTED: glycyl-tRNA synthetase 1, mitochondrial-like [Vitis
           vinifera]
          Length = 710

 Score =  203 bits (517), Expect = 1e-50
 Identities = 98/119 (82%), Positives = 107/119 (89%)
 Frame = +1

Query: 1   MVIQALEAMDEKEAMNMKVALESNGEIEFNICTLGRMVSIKKSMVLISKEKKKEHHRVFT 180
           MV++ALEAM EKEAM MK  LES GE+ F++CTLG+ V+I K M+ ISKEKKKEH RVFT
Sbjct: 492 MVVEALEAMSEKEAMEMKATLESTGEVGFHVCTLGKDVTITKKMLSISKEKKKEHQRVFT 551

Query: 181 PSVIEPSFGIGRIIYCLFEHSFYTRPSKAGYEQLNVFRFPPLVAPIKCTVFPLVQNQQY 357
           PSVIEPSFGIGRIIYCL+EHSFYTRPSKAG EQLNVFRFPPLVAPIKCTVFPLVQNQQY
Sbjct: 552 PSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQY 610


>emb|CBI15763.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  203 bits (517), Expect = 1e-50
 Identities = 98/119 (82%), Positives = 107/119 (89%)
 Frame = +1

Query: 1   MVIQALEAMDEKEAMNMKVALESNGEIEFNICTLGRMVSIKKSMVLISKEKKKEHHRVFT 180
           MV++ALEAM EKEAM MK  LES GE+ F++CTLG+ V+I K M+ ISKEKKKEH RVFT
Sbjct: 469 MVVEALEAMSEKEAMEMKATLESTGEVGFHVCTLGKDVTITKKMLSISKEKKKEHQRVFT 528

Query: 181 PSVIEPSFGIGRIIYCLFEHSFYTRPSKAGYEQLNVFRFPPLVAPIKCTVFPLVQNQQY 357
           PSVIEPSFGIGRIIYCL+EHSFYTRPSKAG EQLNVFRFPPLVAPIKCTVFPLVQNQQY
Sbjct: 529 PSVIEPSFGIGRIIYCLYEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQY 587


>ref|XP_002304639.1| predicted protein [Populus trichocarpa] gi|222842071|gb|EEE79618.1|
           predicted protein [Populus trichocarpa]
          Length = 691

 Score =  202 bits (513), Expect = 3e-50
 Identities = 96/118 (81%), Positives = 108/118 (91%)
 Frame = +1

Query: 4   VIQALEAMDEKEAMNMKVALESNGEIEFNICTLGRMVSIKKSMVLISKEKKKEHHRVFTP 183
           V++ALEAM+EKEA++MK +LE+ GE+EF +CTLG  V+IKK+MV ISKEKKKEH R FTP
Sbjct: 474 VVEALEAMNEKEALDMKASLETKGEVEFYVCTLGEKVTIKKNMVSISKEKKKEHQRTFTP 533

Query: 184 SVIEPSFGIGRIIYCLFEHSFYTRPSKAGYEQLNVFRFPPLVAPIKCTVFPLVQNQQY 357
           SVIEPSFGIGRIIYCL+EHSFY RPSKAG EQLNVFRFPPLVAPIKCTVFPLVQNQQY
Sbjct: 534 SVIEPSFGIGRIIYCLYEHSFYMRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQY 591


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