BLASTX nr result
ID: Panax21_contig00032464
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00032464 (402 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK44283.1| unknown [Medicago truncatula] 42 4e-08 gb|AFK35199.1| unknown [Medicago truncatula] 42 4e-08 ref|XP_003610788.1| Membrane related protein-like protein [Medic... 42 4e-08 ref|XP_002284351.1| PREDICTED: uncharacterized protein LOC100263... 42 6e-08 emb|CAN65670.1| hypothetical protein VITISV_018339 [Vitis vinifera] 42 6e-08 >gb|AFK44283.1| unknown [Medicago truncatula] Length = 436 Score = 42.0 bits (97), Expect(2) = 4e-08 Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 3/34 (8%) Frame = -2 Query: 287 MENYWLD---FVKKPTNIETFVNILFCAFPIWVA 195 ME+Y D F+KKP+ ETFV+IL CA PIW+A Sbjct: 1 MEDYLFDVMEFMKKPSITETFVDILLCAVPIWLA 34 Score = 40.0 bits (92), Expect(2) = 4e-08 Identities = 21/35 (60%), Positives = 24/35 (68%), Gaps = 1/35 (2%) Frame = -1 Query: 165 LRPKHRFVWTFLPK-PARRLWLTFIALSSFSVTFR 64 LR K RF+WT P ARRLWL F ALS+FS+ R Sbjct: 57 LRSKFRFLWTVPPGFGARRLWLAFTALSAFSICRR 91 >gb|AFK35199.1| unknown [Medicago truncatula] Length = 436 Score = 42.0 bits (97), Expect(2) = 4e-08 Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 3/34 (8%) Frame = -2 Query: 287 MENYWLD---FVKKPTNIETFVNILFCAFPIWVA 195 ME+Y D F+KKP+ ETFV+IL CA PIW+A Sbjct: 1 MEDYLFDVMEFMKKPSITETFVDILLCAVPIWLA 34 Score = 40.0 bits (92), Expect(2) = 4e-08 Identities = 21/35 (60%), Positives = 24/35 (68%), Gaps = 1/35 (2%) Frame = -1 Query: 165 LRPKHRFVWTFLPK-PARRLWLTFIALSSFSVTFR 64 LR K RF+WT P ARRLWL F ALS+FS+ R Sbjct: 57 LRSKFRFLWTVPPGFGARRLWLAFTALSAFSICRR 91 >ref|XP_003610788.1| Membrane related protein-like protein [Medicago truncatula] gi|355512123|gb|AES93746.1| Membrane related protein-like protein [Medicago truncatula] Length = 436 Score = 42.0 bits (97), Expect(2) = 4e-08 Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 3/34 (8%) Frame = -2 Query: 287 MENYWLD---FVKKPTNIETFVNILFCAFPIWVA 195 ME+Y D F+KKP+ ETFV+IL CA PIW+A Sbjct: 1 MEDYLFDVMEFMKKPSITETFVDILLCAVPIWLA 34 Score = 40.0 bits (92), Expect(2) = 4e-08 Identities = 21/35 (60%), Positives = 24/35 (68%), Gaps = 1/35 (2%) Frame = -1 Query: 165 LRPKHRFVWTFLPK-PARRLWLTFIALSSFSVTFR 64 LR K RF+WT P ARRLWL F ALS+FS+ R Sbjct: 57 LRSKFRFLWTVPPGFGARRLWLAFTALSAFSICRR 91 >ref|XP_002284351.1| PREDICTED: uncharacterized protein LOC100263172 isoform 2 [Vitis vinifera] Length = 429 Score = 42.0 bits (97), Expect(2) = 6e-08 Identities = 17/27 (62%), Positives = 23/27 (85%) Frame = -2 Query: 275 WLDFVKKPTNIETFVNILFCAFPIWVA 195 ++DF+KKP+ IET ++IL CA PIWVA Sbjct: 8 FMDFMKKPSVIETLLDILLCAVPIWVA 34 Score = 39.7 bits (91), Expect(2) = 6e-08 Identities = 21/32 (65%), Positives = 23/32 (71%), Gaps = 1/32 (3%) Frame = -1 Query: 165 LRPKHRFVWTFLPK-PARRLWLTFIALSSFSV 73 LR K RF+WT P ARRLWL F ALS+FSV Sbjct: 57 LRSKFRFLWTAPPGFGARRLWLAFTALSAFSV 88 >emb|CAN65670.1| hypothetical protein VITISV_018339 [Vitis vinifera] Length = 410 Score = 42.0 bits (97), Expect(2) = 6e-08 Identities = 17/27 (62%), Positives = 23/27 (85%) Frame = -2 Query: 275 WLDFVKKPTNIETFVNILFCAFPIWVA 195 ++DF+KKP+ IET ++IL CA PIWVA Sbjct: 8 FMDFMKKPSVIETLLDILLCAVPIWVA 34 Score = 39.7 bits (91), Expect(2) = 6e-08 Identities = 21/32 (65%), Positives = 23/32 (71%), Gaps = 1/32 (3%) Frame = -1 Query: 165 LRPKHRFVWTFLPK-PARRLWLTFIALSSFSV 73 LR K RF+WT P ARRLWL F ALS+FSV Sbjct: 57 LRSKFRFLWTAPPGFGARRLWLAFTALSAFSV 88