BLASTX nr result

ID: Panax21_contig00032464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032464
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK44283.1| unknown [Medicago truncatula]                           42   4e-08
gb|AFK35199.1| unknown [Medicago truncatula]                           42   4e-08
ref|XP_003610788.1| Membrane related protein-like protein [Medic...    42   4e-08
ref|XP_002284351.1| PREDICTED: uncharacterized protein LOC100263...    42   6e-08
emb|CAN65670.1| hypothetical protein VITISV_018339 [Vitis vinifera]    42   6e-08

>gb|AFK44283.1| unknown [Medicago truncatula]
          Length = 436

 Score = 42.0 bits (97), Expect(2) = 4e-08
 Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 3/34 (8%)
 Frame = -2

Query: 287 MENYWLD---FVKKPTNIETFVNILFCAFPIWVA 195
           ME+Y  D   F+KKP+  ETFV+IL CA PIW+A
Sbjct: 1   MEDYLFDVMEFMKKPSITETFVDILLCAVPIWLA 34



 Score = 40.0 bits (92), Expect(2) = 4e-08
 Identities = 21/35 (60%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = -1

Query: 165 LRPKHRFVWTFLPK-PARRLWLTFIALSSFSVTFR 64
           LR K RF+WT  P   ARRLWL F ALS+FS+  R
Sbjct: 57  LRSKFRFLWTVPPGFGARRLWLAFTALSAFSICRR 91


>gb|AFK35199.1| unknown [Medicago truncatula]
          Length = 436

 Score = 42.0 bits (97), Expect(2) = 4e-08
 Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 3/34 (8%)
 Frame = -2

Query: 287 MENYWLD---FVKKPTNIETFVNILFCAFPIWVA 195
           ME+Y  D   F+KKP+  ETFV+IL CA PIW+A
Sbjct: 1   MEDYLFDVMEFMKKPSITETFVDILLCAVPIWLA 34



 Score = 40.0 bits (92), Expect(2) = 4e-08
 Identities = 21/35 (60%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = -1

Query: 165 LRPKHRFVWTFLPK-PARRLWLTFIALSSFSVTFR 64
           LR K RF+WT  P   ARRLWL F ALS+FS+  R
Sbjct: 57  LRSKFRFLWTVPPGFGARRLWLAFTALSAFSICRR 91


>ref|XP_003610788.1| Membrane related protein-like protein [Medicago truncatula]
           gi|355512123|gb|AES93746.1| Membrane related
           protein-like protein [Medicago truncatula]
          Length = 436

 Score = 42.0 bits (97), Expect(2) = 4e-08
 Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 3/34 (8%)
 Frame = -2

Query: 287 MENYWLD---FVKKPTNIETFVNILFCAFPIWVA 195
           ME+Y  D   F+KKP+  ETFV+IL CA PIW+A
Sbjct: 1   MEDYLFDVMEFMKKPSITETFVDILLCAVPIWLA 34



 Score = 40.0 bits (92), Expect(2) = 4e-08
 Identities = 21/35 (60%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = -1

Query: 165 LRPKHRFVWTFLPK-PARRLWLTFIALSSFSVTFR 64
           LR K RF+WT  P   ARRLWL F ALS+FS+  R
Sbjct: 57  LRSKFRFLWTVPPGFGARRLWLAFTALSAFSICRR 91


>ref|XP_002284351.1| PREDICTED: uncharacterized protein LOC100263172 isoform 2 [Vitis
           vinifera]
          Length = 429

 Score = 42.0 bits (97), Expect(2) = 6e-08
 Identities = 17/27 (62%), Positives = 23/27 (85%)
 Frame = -2

Query: 275 WLDFVKKPTNIETFVNILFCAFPIWVA 195
           ++DF+KKP+ IET ++IL CA PIWVA
Sbjct: 8   FMDFMKKPSVIETLLDILLCAVPIWVA 34



 Score = 39.7 bits (91), Expect(2) = 6e-08
 Identities = 21/32 (65%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
 Frame = -1

Query: 165 LRPKHRFVWTFLPK-PARRLWLTFIALSSFSV 73
           LR K RF+WT  P   ARRLWL F ALS+FSV
Sbjct: 57  LRSKFRFLWTAPPGFGARRLWLAFTALSAFSV 88


>emb|CAN65670.1| hypothetical protein VITISV_018339 [Vitis vinifera]
          Length = 410

 Score = 42.0 bits (97), Expect(2) = 6e-08
 Identities = 17/27 (62%), Positives = 23/27 (85%)
 Frame = -2

Query: 275 WLDFVKKPTNIETFVNILFCAFPIWVA 195
           ++DF+KKP+ IET ++IL CA PIWVA
Sbjct: 8   FMDFMKKPSVIETLLDILLCAVPIWVA 34



 Score = 39.7 bits (91), Expect(2) = 6e-08
 Identities = 21/32 (65%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
 Frame = -1

Query: 165 LRPKHRFVWTFLPK-PARRLWLTFIALSSFSV 73
           LR K RF+WT  P   ARRLWL F ALS+FSV
Sbjct: 57  LRSKFRFLWTAPPGFGARRLWLAFTALSAFSV 88


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