BLASTX nr result

ID: Panax21_contig00032386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032386
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270311.2| PREDICTED: uncharacterized protein LOC100242...   108   6e-22
emb|CAN65296.1| hypothetical protein VITISV_042325 [Vitis vinifera]   108   8e-22
ref|XP_002327220.1| predicted protein [Populus trichocarpa] gi|2...   103   3e-20
ref|XP_002326011.1| predicted protein [Populus trichocarpa] gi|2...    98   1e-18
emb|CBI38138.3| unnamed protein product [Vitis vinifera]               90   3e-16

>ref|XP_002270311.2| PREDICTED: uncharacterized protein LOC100242669 [Vitis vinifera]
          Length = 1601

 Score =  108 bits (270), Expect = 6e-22
 Identities = 67/155 (43%), Positives = 93/155 (60%), Gaps = 4/155 (2%)
 Frame = +1

Query: 49   KIVPIAKDLGGDVL--DLNLSQKNKSSVLLISNLLDSEGLVWTPFPEIRHEYMKDLQKGH 222
            +I+PI   LG +     L+ SQ++ SS  L  NL  ++G +W+PFPEIR + MKDLQ G+
Sbjct: 1087 RIIPITGGLGHNDSFGGLDASQRS-SSHPLACNLEKAKGWIWSPFPEIRRDCMKDLQGGY 1145

Query: 223  LLKFEPINSHGRE--SKVHDMITDEGSRLHIPLGIDNYIVSDYEDEXXXXXXXXXXXXRD 396
            L KFE I+S+  E     + +I +EGSRLHIPLG D+YIVSDYE E            +D
Sbjct: 1146 LPKFESISSYTPEYLPSAYQLIIEEGSRLHIPLGTDDYIVSDYEGELSSIISCALALLKD 1205

Query: 397  PSNLVEYLNEDANRERGMDAKAYERSRSVSRPPSI 501
                 E  +E + RERG+  +A E S S++R  S+
Sbjct: 1206 VPVPAEDFDEGSRRERGLAFRALENSHSLNRITSM 1240


>emb|CAN65296.1| hypothetical protein VITISV_042325 [Vitis vinifera]
          Length = 1517

 Score =  108 bits (269), Expect = 8e-22
 Identities = 67/155 (43%), Positives = 92/155 (59%), Gaps = 4/155 (2%)
 Frame = +1

Query: 49   KIVPIAKDLGGDVL--DLNLSQKNKSSVLLISNLLDSEGLVWTPFPEIRHEYMKDLQKGH 222
            +I+PI   LG +     L+ SQ+  SS  L  NL  ++G +W+PFPEIR + MKDLQ G+
Sbjct: 1003 RIIPITGGLGHNDSFGGLDASQRG-SSHPLACNLEKAKGWIWSPFPEIRRDCMKDLQGGY 1061

Query: 223  LLKFEPINSHGRE--SKVHDMITDEGSRLHIPLGIDNYIVSDYEDEXXXXXXXXXXXXRD 396
            L KFE I+S+  E     + +I +EGSRLHIPLG D+YIVSDYE E            +D
Sbjct: 1062 LPKFESISSYTPEYLPSAYQLIIEEGSRLHIPLGTDDYIVSDYEGELSSIISCALALLKD 1121

Query: 397  PSNLVEYLNEDANRERGMDAKAYERSRSVSRPPSI 501
                 E  +E + RERG+  +A E S S++R  S+
Sbjct: 1122 VPVPAEDFDEGSRRERGLAFRALENSHSLNRITSM 1156


>ref|XP_002327220.1| predicted protein [Populus trichocarpa] gi|222835590|gb|EEE74025.1|
           predicted protein [Populus trichocarpa]
          Length = 749

 Score =  103 bits (256), Expect = 3e-20
 Identities = 58/156 (37%), Positives = 87/156 (55%), Gaps = 4/156 (2%)
 Frame = +1

Query: 46  QKIVPIAKDLG--GDVLDLNLSQKNKSSVLLISNLLDSEGLVWTPFPEIRHEYMKDLQKG 219
           ++ +PI   +G     +D + S+K  S+  L  +L +S G  W PF EIR  YMKDLQ+G
Sbjct: 231 ERTIPIVTSIGMSDSFVDSDSSKKGTSARSLAFSLENSNGWFWMPFSEIRRIYMKDLQRG 290

Query: 220 HLLKFEPINSHGRE--SKVHDMITDEGSRLHIPLGIDNYIVSDYEDEXXXXXXXXXXXXR 393
            + KF+PI+S+ +E  S  + +I +EG RLHIP+G DNY+V DY+ E             
Sbjct: 291 FMPKFQPISSYIQEHVSAAYQLIMEEGQRLHIPVGTDNYMVRDYDGELSSIIACALAFLE 350

Query: 394 DPSNLVEYLNEDANRERGMDAKAYERSRSVSRPPSI 501
           D     E  NED  +E GM  K+ +    ++R P++
Sbjct: 351 DQPVSTELYNEDGRKEGGMSFKSTDSLDILTRIPTM 386


>ref|XP_002326011.1| predicted protein [Populus trichocarpa] gi|222862886|gb|EEF00393.1|
            predicted protein [Populus trichocarpa]
          Length = 1387

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 50/107 (46%), Positives = 70/107 (65%), Gaps = 4/107 (3%)
 Frame = +1

Query: 46   QKIVPIAKDLGGD--VLDLNLSQKNKSSVLLISNLLDSEGLVWTPFPEIRHEYMKDLQKG 219
            ++ +PI   +G     +D +  +K  S+  L S++ +S G  W PFPEIR  YMKDLQ+G
Sbjct: 930  ERTIPITTSIGSSDSFVDFDSIKKGTSARSLASSIENSNGWFWMPFPEIRQIYMKDLQRG 989

Query: 220  HLLKFEPINSHGRE--SKVHDMITDEGSRLHIPLGIDNYIVSDYEDE 354
             + KF+PI+S+ +E  S  H +IT E  RLHIPLG DNY+V DY+DE
Sbjct: 990  FMPKFQPISSNIQEHMSAAHQLITKECQRLHIPLGTDNYMVKDYDDE 1036


>emb|CBI38138.3| unnamed protein product [Vitis vinifera]
          Length = 1310

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 2/86 (2%)
 Frame = +1

Query: 103  SQKNKSSVLLISNLLDSEGLVWTPFPEIRHEYMKDLQKGHLLKFEPINSHGRE--SKVHD 276
            + +  SS  L  NL  ++G +W+PFPEIR + MKDLQ G+L KFE I+S+  E     + 
Sbjct: 846  ASQRSSSHPLACNLEKAKGWIWSPFPEIRRDCMKDLQGGYLPKFESISSYTPEYLPSAYQ 905

Query: 277  MITDEGSRLHIPLGIDNYIVSDYEDE 354
            +I +EGSRLHIPLG D+YIVSDYE E
Sbjct: 906  LIIEEGSRLHIPLGTDDYIVSDYEGE 931


Top