BLASTX nr result

ID: Panax21_contig00032341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032341
         (1061 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274379.2| PREDICTED: putative COX1/OXI3 intron 2 prote...   388   e-105
ref|XP_002308907.1| predicted protein [Populus trichocarpa] gi|2...   356   6e-96
ref|XP_002533678.1| RNA binding protein, putative [Ricinus commu...   353   4e-95
ref|XP_004152940.1| PREDICTED: uncharacterized protein LOC101217...   342   1e-91
ref|XP_004171080.1| PREDICTED: uncharacterized protein LOC101231...   340   5e-91

>ref|XP_002274379.2| PREDICTED: putative COX1/OXI3 intron 2 protein-like [Vitis vinifera]
          Length = 757

 Score =  388 bits (996), Expect = e-105
 Identities = 205/330 (62%), Positives = 248/330 (75%), Gaps = 4/330 (1%)
 Frame = +1

Query: 79   MLLSFRRATTFDHLRVSILSPQRLLSILTPITNP---LTKPQLKTLVLTQCSYGKFSNLI 249
            MLL+ +R  T  H RVSILS  R  S L P  NP   LTKPQLK LV+   S GKFSNLI
Sbjct: 1    MLLNPKRIATL-HSRVSILSLLRRHSTLPPNPNPTTPLTKPQLKALVINHYSRGKFSNLI 59

Query: 250  QNVAALPSVLLTACHNLKPSTNP-NSLTLHSVSTHFFSIQEMAQELAENRFNIESCCFTV 426
            QNV A P VLL AC NL P +N  NSL   +V+  F S++E+ +EL ENRF++ESCC  +
Sbjct: 60   QNVVASPPVLLLACQNLTPRSNDVNSLASPAVALRF-SVEELGRELGENRFDVESCCVRM 118

Query: 427  PPCRHRGESLVVPNLKLKVLIEAIRFILEIVYDDRFVTFTYGGRVNMGRHTAIRYLKNSI 606
             P R +GESLV+PNLKLKV+IEAIR +LEIVYD+R VTF YGGRV MGRHTAIRYLKNS+
Sbjct: 119  VPSRKKGESLVLPNLKLKVVIEAIRMVLEIVYDERLVTFAYGGRVGMGRHTAIRYLKNSV 178

Query: 607  ENPSWWFNVCFNSEKFDSKNVDKLCXXXXXXXXXXXXXXXXXRLFESGTVRIELGAFYLG 786
            +NP+WWF V F+ EKF+ KNV+KLC                 +LFE   ++IELG  YLG
Sbjct: 179  QNPNWWFKVTFDREKFEHKNVNKLCLIIEEKIKDTVLIGIVRKLFECEVLQIELGGCYLG 238

Query: 787  RGFPEECGLSSILINVYFNGFDKEIQEMRLQMNRENPKLKSDELVSMDDNVFHKPLKIYA 966
            RGFP+ECGLSSILINVYFNGFDKEIQ++R++ N+ENP+  S+E++S   +VF+KP+KIYA
Sbjct: 239  RGFPQECGLSSILINVYFNGFDKEIQDLRIRTNQENPRFDSNEVLS-GSSVFYKPVKIYA 297

Query: 967  VRYLDEILVITSGTKLLTMDLKNHVVNFLE 1056
            VRYLDEILVITSG+K+LTMDLKN V+ FLE
Sbjct: 298  VRYLDEILVITSGSKMLTMDLKNQVMKFLE 327


>ref|XP_002308907.1| predicted protein [Populus trichocarpa] gi|222854883|gb|EEE92430.1|
            predicted protein [Populus trichocarpa]
          Length = 787

 Score =  356 bits (913), Expect = 6e-96
 Identities = 199/361 (55%), Positives = 242/361 (67%), Gaps = 35/361 (9%)
 Frame = +1

Query: 79   MLLSFRRATTFDHLRVS--------------ILSPQRLLSILTPI----TNPLTKPQLKT 204
            ++++ ++ TT   LR+S               L+P  + +  TP     T PLT PQLKT
Sbjct: 2    LIVNLKKVTTTFDLRLSSPTTSSLKLLYSTLTLNPNTIQNPKTPPIQNPTKPLTTPQLKT 61

Query: 205  LVLTQCSYGKFSNLIQNVAALPSVLLTACHNL-----------------KPSTNPNSLTL 333
            LVL+Q S+GKFSNLIQNV  LPSVLLTA  NL                   ST PN    
Sbjct: 62   LVLSQYSHGKFSNLIQNVVGLPSVLLTASQNLITHHSNDGLNCTESNELAESTQPNLSLY 121

Query: 334  HSVSTHFFSIQEMAQELAENRFNIESCCFTVPPCRHRGESLVVPNLKLKVLIEAIRFILE 513
            HSVS  F SI+EM +E+ ENRF+IE+ C  +      GE+LV+PNLKLKV IEAIR +LE
Sbjct: 122  HSVSKRF-SIEEMGREIFENRFDIEAHCVKMSD---EGETLVLPNLKLKVFIEAIRIVLE 177

Query: 514  IVYDDRFVTFTYGGRVNMGRHTAIRYLKNSIENPSWWFNVCFNSEKFDSKNVDKLCXXXX 693
            IVYDDRFVTF+YGGRVNMGRHTAIRYLKNS+ NPSWWF+VCFN  KFD + VDKL     
Sbjct: 178  IVYDDRFVTFSYGGRVNMGRHTAIRYLKNSVNNPSWWFSVCFNDVKFDKRKVDKLYLFIE 237

Query: 694  XXXXXXXXXXXXXRLFESGTVRIELGAFYLGRGFPEECGLSSILINVYFNGFDKEIQEMR 873
                         RLF+ G ++IELG  YL +G P+ECGL SILINVYFNGFD+EIQEMR
Sbjct: 238  EKIKDGILIDVIKRLFDCGVLKIELGRCYLAKGLPQECGLCSILINVYFNGFDREIQEMR 297

Query: 874  LQMNRENPKLKSDELVSMDDNVFHKPLKIYAVRYLDEILVITSGTKLLTMDLKNHVVNFL 1053
            L+M++ENPKL  +E +    +  +KPLK+YAVRYLDEILVITSG+K+LTM+LK  V+ FL
Sbjct: 298  LRMSKENPKLDQNE-IGEGSSSSYKPLKMYAVRYLDEILVITSGSKMLTMNLKKWVLKFL 356

Query: 1054 E 1056
            E
Sbjct: 357  E 357


>ref|XP_002533678.1| RNA binding protein, putative [Ricinus communis]
            gi|223526429|gb|EEF28708.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 751

 Score =  353 bits (906), Expect = 4e-95
 Identities = 191/332 (57%), Positives = 237/332 (71%), Gaps = 5/332 (1%)
 Frame = +1

Query: 79   MLLSFRRATTFDHLRVSILSPQRLLSILTPIT-----NPLTKPQLKTLVLTQCSYGKFSN 243
            ML   +    F+   + +LS  RL     PI      NPLT  QLK LVL+Q S+GKF N
Sbjct: 1    MLFKLKAIAPFN---LRVLSSCRLFYSTVPINPKTPVNPLTGQQLKALVLSQYSHGKFVN 57

Query: 244  LIQNVAALPSVLLTACHNLKPSTNPNSLTLHSVSTHFFSIQEMAQELAENRFNIESCCFT 423
            LIQNV ALPSVL++A  NL   T+PN     SVS HF SI+EM +E+ + RF++ES C  
Sbjct: 58   LIQNVVALPSVLISAAENLV--TSPNESLYLSVSKHF-SIEEMGREVFDKRFDLESHCAR 114

Query: 424  VPPCRHRGESLVVPNLKLKVLIEAIRFILEIVYDDRFVTFTYGGRVNMGRHTAIRYLKNS 603
                  +GESLV+PNLKLKV IEAIR +LEIVYDDRFVTF YGGRVNMGRHTAIRYLKN+
Sbjct: 115  FAS---KGESLVLPNLKLKVFIEAIRVVLEIVYDDRFVTFCYGGRVNMGRHTAIRYLKNT 171

Query: 604  IENPSWWFNVCFNSEKFDSKNVDKLCXXXXXXXXXXXXXXXXXRLFESGTVRIELGAFYL 783
            +++PSWWF+VCF+  KFDS+N+DKLC                 RLFE G + IELG F+L
Sbjct: 172  VKDPSWWFSVCFSRLKFDSRNLDKLCLFIEEKINDGVLIDVIKRLFECGVLNIELGGFHL 231

Query: 784  GRGFPEECGLSSILINVYFNGFDKEIQEMRLQMNRENPKLKSDELVSMDDNVFHKPLKIY 963
            G+G P+ECGL  ILIN+YFNGFDKEIQ++RL+++ +NPK + +E VS   N   KPLK+Y
Sbjct: 232  GKGLPQECGLCPILINIYFNGFDKEIQQIRLRISEQNPKFEPNE-VSERSNSSFKPLKVY 290

Query: 964  AVRYLDEILVITSGTKLLTMDLKNHVVNFLEK 1059
            A+RYLDEILVITSG+K+LTMDLK+ V+ FLE+
Sbjct: 291  AIRYLDEILVITSGSKMLTMDLKSKVLKFLEE 322


>ref|XP_004152940.1| PREDICTED: uncharacterized protein LOC101217546 [Cucumis sativus]
          Length = 751

 Score =  342 bits (876), Expect = 1e-91
 Identities = 175/295 (59%), Positives = 219/295 (74%), Gaps = 3/295 (1%)
 Frame = +1

Query: 181  LTKPQLKTLVLTQCSYGKFSNLIQNVAALPSVLLTACHNL--KPSTN-PNSLTLHSVSTH 351
            LT  QLK LVL++ S+GKF +L QNV A PSVLLTA  NL   P +N P+SL L  + + 
Sbjct: 95   LTSSQLKALVLSRFSHGKFVDLFQNVVASPSVLLTASQNLITPPFSNAPDSLPLFDLVSK 154

Query: 352  FFSIQEMAQELAENRFNIESCCFTVPPCRHRGESLVVPNLKLKVLIEAIRFILEIVYDDR 531
             FS++ MA+EL+ENRF++ +CC  + P   +GESL++PNLKLKVLIEAIR ++EIVYD+R
Sbjct: 155  CFSVEVMARELSENRFDVGACCVPMAPLEEKGESLLLPNLKLKVLIEAIRMVMEIVYDER 214

Query: 532  FVTFTYGGRVNMGRHTAIRYLKNSIENPSWWFNVCFNSEKFDSKNVDKLCXXXXXXXXXX 711
            FVTF+YGGRV MGRHTAIRYLKNS++NPSWWF V F  +KF+S +V+ LC          
Sbjct: 215  FVTFSYGGRVGMGRHTAIRYLKNSVQNPSWWFTVAFRRKKFESVHVNTLCLLMQEKIKDD 274

Query: 712  XXXXXXXRLFESGTVRIELGAFYLGRGFPEECGLSSILINVYFNGFDKEIQEMRLQMNRE 891
                   +LFE   ++IELG  YLGRGFP+E GL SIL+N+YFNGFDKEIQ +RLQ   E
Sbjct: 275  ILIYMLRKLFEVEAIQIELGGCYLGRGFPQESGLCSILLNIYFNGFDKEIQRIRLQKIEE 334

Query: 892  NPKLKSDELVSMDDNVFHKPLKIYAVRYLDEILVITSGTKLLTMDLKNHVVNFLE 1056
            NPK   DE+VS     FH P+KIYAVRYLDEILVITSG+K+LTM+LK+ V+ +LE
Sbjct: 335  NPKFNLDEIVS-----FHNPVKIYAVRYLDEILVITSGSKMLTMELKSQVLKYLE 384


>ref|XP_004171080.1| PREDICTED: uncharacterized protein LOC101231062 [Cucumis sativus]
          Length = 768

 Score =  340 bits (871), Expect = 5e-91
 Identities = 183/321 (57%), Positives = 232/321 (72%), Gaps = 5/321 (1%)
 Frame = +1

Query: 109  FDHLRVSIL-SPQ-RLLSILTPITNPLTKPQLKTLVLTQCSYGKFSNLIQNVAALPSVLL 282
            + HL +++  SPQ  L S  +P T  LT  QLK LVL++ S+GKF +L QNV A PSVLL
Sbjct: 88   YSHLPLNLKHSPQLNLPSQHSPET--LTSSQLKALVLSRFSHGKFVDLFQNVVASPSVLL 145

Query: 283  TACHNL--KPSTN-PNSLTLHSVSTHFFSIQEMAQELAENRFNIESCCFTVPPCRHRGES 453
            TA  NL   P +N P+SL L  + +  FS++ MA+EL+ENRF++ +CC  + P   +GES
Sbjct: 146  TASQNLITPPFSNAPDSLPLFDLVSKCFSVEVMARELSENRFDVGACCVPMAPLEEKGES 205

Query: 454  LVVPNLKLKVLIEAIRFILEIVYDDRFVTFTYGGRVNMGRHTAIRYLKNSIENPSWWFNV 633
            L++PNLKLKVLIEAIR ++EIVYD+RFVTF+YGGRV MGRHTAIRYLKNS++NPSWWF V
Sbjct: 206  LLLPNLKLKVLIEAIRMVMEIVYDERFVTFSYGGRVGMGRHTAIRYLKNSVQNPSWWFTV 265

Query: 634  CFNSEKFDSKNVDKLCXXXXXXXXXXXXXXXXXRLFESGTVRIELGAFYLGRGFPEECGL 813
             F  +KF+S +V+ LC                 +LFE   ++IELG  YLGRGFP+E GL
Sbjct: 266  AFRRKKFESVHVNTLCLLMQEKIKDDILIYMLRKLFEVEAIQIELGGCYLGRGFPQESGL 325

Query: 814  SSILINVYFNGFDKEIQEMRLQMNRENPKLKSDELVSMDDNVFHKPLKIYAVRYLDEILV 993
             SIL+N+YFNGFDKEIQ +RLQ   ENPK   DE+VS     F  P+KIYAVRYLDEILV
Sbjct: 326  CSILLNIYFNGFDKEIQRIRLQKIEENPKFNLDEIVS-----FQNPVKIYAVRYLDEILV 380

Query: 994  ITSGTKLLTMDLKNHVVNFLE 1056
            ITSG+K+LTM+LK+ V+ +LE
Sbjct: 381  ITSGSKMLTMELKSQVLKYLE 401


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