BLASTX nr result

ID: Panax21_contig00032322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032322
         (1342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281118.2| PREDICTED: transcription factor bHLH110-like...   281   3e-73
emb|CAN61992.1| hypothetical protein VITISV_030445 [Vitis vinifera]   281   3e-73
ref|XP_002510430.1| transcription factor, putative [Ricinus comm...   245   2e-62
ref|XP_002890742.1| hypothetical protein ARALYDRAFT_472970 [Arab...   199   1e-48
ref|NP_174087.1| transcription factor bHLH110 [Arabidopsis thali...   197   4e-48

>ref|XP_002281118.2| PREDICTED: transcription factor bHLH110-like [Vitis vinifera]
            gi|302142540|emb|CBI19743.3| unnamed protein product
            [Vitis vinifera]
          Length = 427

 Score =  281 bits (719), Expect = 3e-73
 Identities = 180/311 (57%), Positives = 207/311 (66%), Gaps = 14/311 (4%)
 Frame = -2

Query: 1044 YPKFTEMLNXXXXXXXSIDLDSHLLFHPSSNSSSYNKNE-QRGHLLKTFDSGCQINXXXX 868
            +PKFTEM+N        + L       P+S   S + N+     LLK+F SGCQIN    
Sbjct: 114  FPKFTEMINSSSSAVEDLHLP------PTSYIRSKDLNDLSEKLLLKSFSSGCQINGLQL 167

Query: 867  XXXXXXXXXLFYSTP------TSRRSFSQIYPTINISNLNQVPXXXXXXXXSLVMNLEAL 706
                        +T        SR  FSQI+PTINISNL+Q          SL MNL+AL
Sbjct: 168  SAGEFCANAQSCNTGFGGVAIPSRGHFSQIFPTINISNLSQ---PSSTISSSLDMNLQAL 224

Query: 705  DLFNSARFSGT-TNISHSSQDHRVGLSKSSLDYNMRQ-QFISHRPPNSPTNVSPFNNGVP 532
            DL  SARFSGT +  SH++    +GL K SL + +   Q  ++RP NS + +SPF NGV 
Sbjct: 225  DLLTSARFSGTFSQPSHNN----LGLFKDSLSFGLDHLQQSTNRPSNSSSKISPFTNGVA 280

Query: 531  EVKRSSSFLETKAVPQERPKKSRLDSRSSCPPFKVRKEKLGDRIAALQQLVAPFGKTDTA 352
            EVKR SSFLE KA  Q  PKKSRL+SR+SCPP KVRKEKLGDRIAALQQLVAPFGKTDTA
Sbjct: 281  EVKRPSSFLEPKAT-QATPKKSRLESRASCPPIKVRKEKLGDRIAALQQLVAPFGKTDTA 339

Query: 351  SVLMEAIGYIKFLQNQVETLSVPYMKSSRNKAR-KMQGGSGEDGEST----RDLRSRGLC 187
            SVLMEAIGYIKFLQNQVETLSVPYMKSSRNK+   MQGGS  DGE +    RDLRSRGLC
Sbjct: 340  SVLMEAIGYIKFLQNQVETLSVPYMKSSRNKSSISMQGGSA-DGEGSEEPRRDLRSRGLC 398

Query: 186  LVPLTCLSYVT 154
            LVPL+C+SYVT
Sbjct: 399  LVPLSCMSYVT 409


>emb|CAN61992.1| hypothetical protein VITISV_030445 [Vitis vinifera]
          Length = 512

 Score =  281 bits (719), Expect = 3e-73
 Identities = 181/311 (58%), Positives = 208/311 (66%), Gaps = 14/311 (4%)
 Frame = -2

Query: 1044 YPKFTEMLNXXXXXXXSIDLDSHLLFHPSSNSSSYNKNE-QRGHLLKTFDSGCQINXXXX 868
            +PKFTEM+N        + L       P+S   S + N+     LLK+F SGCQIN    
Sbjct: 139  FPKFTEMINSSSSAVEDLHLP------PTSYIRSKDLNDLSEKLLLKSFSSGCQINGLQL 192

Query: 867  XXXXXXXXXLFYSTP------TSRRSFSQIYPTINISNLNQVPXXXXXXXXSLVMNLEAL 706
                        +T        SR  FSQI+PTINISNL+Q          SL MNL+AL
Sbjct: 193  SAGEFXANAQSCNTGFGGVAIPSRGHFSQIFPTINISNLSQ---PSSTISSSLDMNLQAL 249

Query: 705  DLFNSARFSGT-TNISHSSQDHRVGLSKSSLDYNMRQ-QFISHRPPNSPTNVSPFNNGVP 532
            DL  SARFSGT +  SH++    +GL K SL + +   Q  ++RP NS + +SPF NGV 
Sbjct: 250  DLLTSARFSGTFSQPSHNN----LGLFKDSLSFGLDHLQZSTNRPSNSSSKISPFTNGVA 305

Query: 531  EVKRSSSFLETKAVPQERPKKSRLDSRSSCPPFKVRKEKLGDRIAALQQLVAPFGKTDTA 352
            EVKR SSFLE KA  Q  PKKSRL+SR+SCPP KVRKEKLGDRIAALQQLVAPFGKTDTA
Sbjct: 306  EVKRPSSFLEPKAT-QATPKKSRLESRASCPPIKVRKEKLGDRIAALQQLVAPFGKTDTA 364

Query: 351  SVLMEAIGYIKFLQNQVETLSVPYMKSSRNKAR-KMQGGSGEDGEST----RDLRSRGLC 187
            SVLMEAIGYIKFLQNQVETLSVPYMKSSRNK+   MQGGS  DGE +    RDLRSRGLC
Sbjct: 365  SVLMEAIGYIKFLQNQVETLSVPYMKSSRNKSSISMQGGSA-DGEGSEEPRRDLRSRGLC 423

Query: 186  LVPLTCLSYVT 154
            LVPL+C+SYVT
Sbjct: 424  LVPLSCMSYVT 434


>ref|XP_002510430.1| transcription factor, putative [Ricinus communis]
            gi|223551131|gb|EEF52617.1| transcription factor,
            putative [Ricinus communis]
          Length = 436

 Score =  245 bits (626), Expect = 2e-62
 Identities = 162/310 (52%), Positives = 195/310 (62%), Gaps = 13/310 (4%)
 Frame = -2

Query: 1044 YPKFTEMLNXXXXXXXSIDLDSHLLFHPSSNSSSYNKNEQRGH-------LLKTFDSGCQ 886
            + KFTEM+N       + D DSHL      +S+SY K+EQ+         LLKT  SG  
Sbjct: 121  FTKFTEMINSTSAASNT-DQDSHL------SSTSYIKDEQKYMTDLSEKLLLKTISSGFP 173

Query: 885  INXXXXXXXXXXXXXLFYSTPTSRRSFSQIYPTINISNLNQVPXXXXXXXXSLVMNLEAL 706
            IN              F S   SR +FSQIYP+INISNLN+             MNL+AL
Sbjct: 174  INGHPQFSPSLICSS-FGSPIPSRGNFSQIYPSINISNLNRSTSPSISGSFD--MNLQAL 230

Query: 705  DLFNSARFSGTTNISHSSQDHRVGLSKSSLDYNMRQQFISHRPPNSPTNVSPFNNG-VPE 529
            DL  S RF G+      S D+ +G+ K ++ Y+   +  +H P  S + +S        E
Sbjct: 231  DLLTSTRFGGS--FGQPSHDN-LGIYKDNISYDF-DRMQNHMPSCSHSKISSITTKETTE 286

Query: 528  VKR-SSSFLETKAVPQERPKKSRLDSRSSCPPFKVRKEKLGDRIAALQQLVAPFGKTDTA 352
             KR  SS +E KA  Q  PKKSRL++R+SCPPFKVRKEKLGDRIAALQQLVAPFGKTDTA
Sbjct: 287  AKRPGSSLMEPKATLQAAPKKSRLETRASCPPFKVRKEKLGDRIAALQQLVAPFGKTDTA 346

Query: 351  SVLMEAIGYIKFLQNQVETLSVPYMKSSRNKARK--MQGGSGEDG--ESTRDLRSRGLCL 184
            SVLMEAIGYIKFLQNQVETLSVPYMKSSRNK+ +    G + E+G  E  +DLRSRGLCL
Sbjct: 347  SVLMEAIGYIKFLQNQVETLSVPYMKSSRNKSSRNSQSGPTVEEGNFEPKKDLRSRGLCL 406

Query: 183  VPLTCLSYVT 154
            VPL+C+SYVT
Sbjct: 407  VPLSCMSYVT 416


>ref|XP_002890742.1| hypothetical protein ARALYDRAFT_472970 [Arabidopsis lyrata subsp.
           lyrata] gi|297336584|gb|EFH67001.1| hypothetical protein
           ARALYDRAFT_472970 [Arabidopsis lyrata subsp. lyrata]
          Length = 449

 Score =  199 bits (506), Expect = 1e-48
 Identities = 125/270 (46%), Positives = 170/270 (62%), Gaps = 16/270 (5%)
 Frame = -2

Query: 915 LLKTFDSGCQINXXXXXXXXXXXXXLFYSTPTSRRSFSQIYPTINISNLNQVPXXXXXXX 736
           LLK+  SG  I+                S+ + R +FSQIYP++NIS+L++         
Sbjct: 157 LLKSMSSGFPISGDYCSSLPSSSSSSSPSSQSHRGNFSQIYPSVNISSLSESRKMSMDDM 216

Query: 735 XSLVMNLEA-LDLFNSARFSGTTNIS--HSSQDHRVGLSKSSLD------YNMRQQFISH 583
            ++    +  + +F+   F G   +   +S +   +G+S+ S        ++  QQ + H
Sbjct: 217 SNIPRPFDMNMQVFDGRLFEGNVLVPPLNSQEISNLGMSRGSFPPFGLPFHHHLQQTLPH 276

Query: 582 RPPNSPTN-VSPFNNG--VPEVKRSSSFLETKAVPQERPKKSRLDSRSSCPPFKVRKEKL 412
            P +SPT+ +  F+N     E KR +  + TK V +   KK R++SRSSCPPFKVRKEKL
Sbjct: 277 -PSSSPTHQMEMFSNESQTSEGKRHNFLMATK-VGENASKKPRVESRSSCPPFKVRKEKL 334

Query: 411 GDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMKSSRNKARKMQ--GG 238
           GDRIAALQQLV+PFGKTDTASVLMEAIGYIKFLQ+Q+ETLSVPYM++SRN+  K    G 
Sbjct: 335 GDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQSQIETLSVPYMRASRNRTGKASQLGS 394

Query: 237 SGEDG--ESTRDLRSRGLCLVPLTCLSYVT 154
             ++G  E TRDLRSRGLCLVPL+C++YVT
Sbjct: 395 QSQEGDEEETRDLRSRGLCLVPLSCMTYVT 424


>ref|NP_174087.1| transcription factor bHLH110 [Arabidopsis thaliana]
           gi|218563530|sp|Q9SFZ3.2|BH110_ARATH RecName:
           Full=Transcription factor bHLH110; AltName: Full=Basic
           helix-loop-helix protein 110; Short=AtbHLH110;
           Short=bHLH 110; AltName: Full=Transcription factor EN
           59; AltName: Full=bHLH transcription factor bHLH110
           gi|332192739|gb|AEE30860.1| transcription factor bHLH110
           [Arabidopsis thaliana]
          Length = 453

 Score =  197 bits (502), Expect = 4e-48
 Identities = 124/269 (46%), Positives = 167/269 (62%), Gaps = 15/269 (5%)
 Frame = -2

Query: 915 LLKTFDSGCQINXXXXXXXXXXXXXLFYSTPTSRRSFSQIYPTINISNLNQVPXXXXXXX 736
           LLK+  SG  IN                S+ + R +FSQIYP++NIS+L++         
Sbjct: 161 LLKSMSSGFPINGDYGSSLPSSSSSSSPSSQSHRGNFSQIYPSVNISSLSESRKMSMDDM 220

Query: 735 XSLVMNLEA-LDLFNSARFSGTTNIS--HSSQDHRVGLSKSSLD------YNMRQQFISH 583
            ++    +  + +F+   F G   +   ++ +   +G+S+ SL       ++  QQ + H
Sbjct: 221 SNISRPFDINMQVFDGRLFEGNVLVPPFNAQEISSLGMSRGSLPSFGLPFHHHLQQTLPH 280

Query: 582 RPPNSPTNVSPFNNG--VPEVKRSSSFLETKAVPQERPKKSRLDSRSSCPPFKVRKEKLG 409
              +    +  F+N     E KR +  + TKA  +   KK R++SRSSCPPFKVRKEKLG
Sbjct: 281 LSSSPTHQMEMFSNEPQTSEGKRHNFLMATKA-GENASKKPRVESRSSCPPFKVRKEKLG 339

Query: 408 DRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMKSSRN---KARKMQGG 238
           DRIAALQQLV+PFGKTDTASVLMEAIGYIKFLQ+Q+ETLSVPYM++SRN   KA ++   
Sbjct: 340 DRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQSQIETLSVPYMRASRNRPGKASQLVSQ 399

Query: 237 SGE-DGESTRDLRSRGLCLVPLTCLSYVT 154
           S E D E TRDLRSRGLCLVPL+C++YVT
Sbjct: 400 SQEGDEEETRDLRSRGLCLVPLSCMTYVT 428


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