BLASTX nr result

ID: Panax21_contig00032308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032308
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220...    64   2e-08
ref|XP_003629041.1| hypothetical protein MTR_8g072470 [Medicago ...    60   3e-07
gb|AAF79677.1|AC022314_18 F9C16.26 [Arabidopsis thaliana]              57   3e-06
ref|XP_003598505.1| NADPH:quinone oxidoreductase [Medicago trunc...    57   3e-06
ref|NP_680290.1| Zinc knuckle (CCHC-type) family protein [Arabid...    57   4e-06

>ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220238, partial [Cucumis
           sativus]
          Length = 169

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 37/82 (45%), Positives = 46/82 (56%)
 Frame = -1

Query: 632 LASGIGKPLFVDKITEKLEPMNYARICVELTTSSGWPSSLDVVVLDEETNSEKVVSVEVE 453
           +AS IGKPL VD  T++   ++YARICVEL   S  P  + V +  EE        V V 
Sbjct: 73  VASAIGKPLSVDLATKERCRLSYARICVELNVDSTMPIEITVNLRGEE------FIVPVT 126

Query: 452 YQNKPLSCSHCKSFGHSLLRCP 387
           Y+ KP  C+ C SFGHS   CP
Sbjct: 127 YEWKPRKCNLCHSFGHSQSTCP 148


>ref|XP_003629041.1| hypothetical protein MTR_8g072470 [Medicago truncatula]
           gi|355523063|gb|AET03517.1| hypothetical protein
           MTR_8g072470 [Medicago truncatula]
          Length = 340

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 32/81 (39%), Positives = 50/81 (61%)
 Frame = -1

Query: 632 LASGIGKPLFVDKITEKLEPMNYARICVELTTSSGWPSSLDVVVLDEETNSEKVVSVEVE 453
           +ASGIG PL +D+ T+      YAR+ V++  S    +S   V+++ E N+     +EV+
Sbjct: 137 IASGIGTPLLIDEATQSRVFGLYARVLVDVDLSKKLFNS---VLVEREGNA---FPMEVQ 190

Query: 452 YQNKPLSCSHCKSFGHSLLRC 390
           Y+ +PL CSHCK  GH++L C
Sbjct: 191 YERQPLFCSHCKHIGHAILNC 211


>gb|AAF79677.1|AC022314_18 F9C16.26 [Arabidopsis thaliana]
          Length = 1902

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 35/90 (38%), Positives = 45/90 (50%)
 Frame = -1

Query: 632  LASGIGKPLFVDKITEKLEPMNYARICVELTTSSGWPSSLDVVVLDEETNSEKVVSVEVE 453
            +ASGIG+PL  +K   KL+P+N     V++      P    VVV D   NS K+    VE
Sbjct: 1326 IASGIGEPLHTEK--SKLDPINIGTTKVKVVIKLDIPLPDSVVVKDIHGNSAKI---SVE 1380

Query: 452  YQNKPLSCSHCKSFGHSLLRCPNANYKWVP 363
            Y   P  C +C  +GH L RCP    K  P
Sbjct: 1381 YPRPPPKCLNCGCYGHLLSRCPKPLMKKYP 1410


>ref|XP_003598505.1| NADPH:quinone oxidoreductase [Medicago truncatula]
           gi|355487553|gb|AES68756.1| NADPH:quinone oxidoreductase
           [Medicago truncatula]
          Length = 427

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/85 (38%), Positives = 48/85 (56%)
 Frame = -1

Query: 632 LASGIGKPLFVDKITEKLEPMNYARICVELTTSSGWPSSLDVVVLDEETNSEKVVSVEVE 453
           +ASGIG PL +D+ T+     +YARI V++  S    +  + VV++ E  +     V VE
Sbjct: 144 IASGIGTPLTIDEATQSRLFGHYARILVDVDMSD---TLFNSVVVEREGYA---FPVTVE 197

Query: 452 YQNKPLSCSHCKSFGHSLLRCPNAN 378
           Y+ +P  CSHCK  GHS+  C   N
Sbjct: 198 YERRPSFCSHCKMLGHSIQDCNRIN 222


>ref|NP_680290.1| Zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
           gi|332006504|gb|AED93887.1| Zinc knuckle (CCHC-type)
           family protein [Arabidopsis thaliana]
          Length = 457

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 33/90 (36%), Positives = 48/90 (53%)
 Frame = -1

Query: 632 LASGIGKPLFVDKITEKLEPMNYARICVELTTSSGWPSSLDVVVLDEETNSEKVVSVEVE 453
           +ASGIG+PL  +K   +L P+N  R  V++ T+ G P    +VV D + N+ +V    V 
Sbjct: 253 IASGIGEPLHTEK--SRLGPVNIGRTKVKVVTNLGTPLPDSIVVRDVQGNTARVA---VT 307

Query: 452 YQNKPLSCSHCKSFGHSLLRCPNANYKWVP 363
           Y   P  C +C  +GH L RC     K +P
Sbjct: 308 YPRPPPKCLNCGRYGHLLSRCSKPLMKKLP 337


Top