BLASTX nr result

ID: Panax21_contig00032300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032300
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336168.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_002322662.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_002323288.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|NP_199385.2| cysteine/histidine-rich C1 domain-containing pr...    71   1e-10
dbj|BAB09215.1| CHP-rich zinc finger protein-like [Arabidopsis t...    71   1e-10

>ref|XP_002336168.1| predicted protein [Populus trichocarpa] gi|222874811|gb|EEF11942.1|
           predicted protein [Populus trichocarpa]
          Length = 740

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 52/171 (30%), Positives = 78/171 (45%)
 Frame = +2

Query: 5   LPKQFRTFPQLCSICGDKVHHYKWLYYCANCRFFAHIKCAXXXXXXXXXXXXKNVEDAEK 184
           L +   +  + C IC  +V     +YYC +C F AH+ C+               E  E+
Sbjct: 308 LQQGIESINKYCGICRREVDTEYGVYYCPDCDFVAHVNCSIEYGDSA-------TEIVEE 360

Query: 185 NHLDESNMVHFPLTDAIEKQFIKAISLTDDTAIAPDYIDHWAHKDHPLVLSDQLKKSNAI 364
           N  ++S  V     +    + ++ I   +D  I  + IDHW+H+ H L+L D++      
Sbjct: 361 NEEEQSVTVDGQFMEP-SFRVVREIKHGEDRII--EEIDHWSHQ-HNLILIDKV------ 410

Query: 365 EMANRDDDQMLCDGCVRPILIDDQFYGCVQCNFFLHKYCAELPPKLQHASH 517
                 DD + CDGC+ PI     FY C  CNFFL K C ELP + +   H
Sbjct: 411 ------DDDLKCDGCMFPI--STPFYSCASCNFFLDKTCIELPRRKKWQYH 453



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 51/181 (28%), Positives = 73/181 (40%), Gaps = 19/181 (10%)
 Frame = +2

Query: 35  LCSICGDKVHHYKW--LYYCANCRFFAHIKCAXXXXXXXXXXXXKNVEDAEKNHLDESNM 208
           +CS C   +    W   Y C +C FF H KCA            + +      HL     
Sbjct: 28  ICSGCEGPI----WGPCYSCTSCYFFLHKKCAELPREIK-----RRIHRRHPLHLLAKPP 78

Query: 209 VHFP--LTDAIEK---------QFIKAISLTDDTAIAPDYID------HWAHKDHPLVLS 337
            H+     D   K          F K   L    A  P +++       +AHKDHPL+L+
Sbjct: 79  SHYTRCFCDRCYKTCNSFVYHCSFCK-FDLDIKCAFQPGFLEVDSQAHQFAHKDHPLILN 137

Query: 338 DQLKKSNAIEMANRDDDQMLCDGCVRPILIDDQFYGCVQCNFFLHKYCAELPPKLQHASH 517
           ++ +            + ++C  C  P+      Y C  CNFFLHK CAELPP+++   H
Sbjct: 138 EEQEYHG---------EGVVCSLCKEPM--SGPSYSCTSCNFFLHKKCAELPPEIKRHIH 186

Query: 518 P 520
           P
Sbjct: 187 P 187



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
 Frame = +2

Query: 296 IDHWAHKDHPLVLSDQLKKSNAIEMANRDDDQMLCDGCVRPILIDDQFYGCVQCNFFLHK 475
           ++H++H DHPL+L +Q+ + +         + ++C GC  PI      Y C  C FFLHK
Sbjct: 3   VEHFSHPDHPLILINQVLEYSC--------ELVICSGCEGPIW--GPCYSCTSCYFFLHK 52

Query: 476 YCAELPPKLQ---HASHP 520
            CAELP +++   H  HP
Sbjct: 53  KCAELPREIKRRIHRRHP 70


>ref|XP_002322662.1| predicted protein [Populus trichocarpa]
           gi|224139810|ref|XP_002323287.1| predicted protein
           [Populus trichocarpa] gi|222867292|gb|EEF04423.1|
           predicted protein [Populus trichocarpa]
           gi|222867917|gb|EEF05048.1| predicted protein [Populus
           trichocarpa]
          Length = 197

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 1/171 (0%)
 Frame = +2

Query: 8   PKQ-FRTFPQLCSICGDKVHHYKWLYYCANCRFFAHIKCAXXXXXXXXXXXXKNVEDAEK 184
           P+Q  ++  + C IC  +V     +YYC +C F AH+ C+            +  E+ + 
Sbjct: 38  PQQCIKSIKKHCGICCREVDTEYGVYYCPDCDFVAHVNCSIEYGDSTLTEIVEENEEEQS 97

Query: 185 NHLDESNMVHFPLTDAIEKQFIKAISLTDDTAIAPDYIDHWAHKDHPLVLSDQLKKSNAI 364
             +D+  MV           F     + ++  I  + I H +H+ H L+L+D++      
Sbjct: 98  VTVDDQFMV---------PSFRVVREIREERII--EEIKHLSHQ-HNLILNDKV------ 139

Query: 365 EMANRDDDQMLCDGCVRPILIDDQFYGCVQCNFFLHKYCAELPPKLQHASH 517
                 DD + CDGC+ PI     FY C  CNFFL K C ELP + +   H
Sbjct: 140 ------DDDLKCDGCMLPI--STPFYSCDSCNFFLDKTCIELPRRKKWQYH 182


>ref|XP_002323288.1| predicted protein [Populus trichocarpa] gi|222867918|gb|EEF05049.1|
           predicted protein [Populus trichocarpa]
          Length = 697

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 47/160 (29%), Positives = 72/160 (45%)
 Frame = +2

Query: 38  CSICGDKVHHYKWLYYCANCRFFAHIKCAXXXXXXXXXXXXKNVEDAEKNHLDESNMVHF 217
           C IC  +V     +YYC +C F AH+ C+            +N E+      D+     F
Sbjct: 315 CGICRLEVDSKYGVYYCPDCDFVAHVNCSVEYGDFETEIVEENEEEQSVTVDDQFMEPSF 374

Query: 218 PLTDAIEKQFIKAISLTDDTAIAPDYIDHWAHKDHPLVLSDQLKKSNAIEMANRDDDQML 397
                   + ++ I   ++  I  + I+H++H+ H L+L D++            DD + 
Sbjct: 375 --------RVVREIKHGEERII--EEIEHFSHQ-HNLILIDKV------------DDDLK 411

Query: 398 CDGCVRPILIDDQFYGCVQCNFFLHKYCAELPPKLQHASH 517
           C+GC+ PI     FY C  CNFFL K C ELP K +   H
Sbjct: 412 CEGCMLPI--STPFYRCASCNFFLDKTCIELPRKKKWQYH 449



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 50/176 (28%), Positives = 72/176 (40%), Gaps = 14/176 (7%)
 Frame = +2

Query: 35  LCSICGDKVHHYKW--LYYCANCRFFAHIKCAXXXXXXXXXXXXKNVEDAEKNHLDESNM 208
           +CS C   +    W   Y C +C FF H KCA            + +      HL   + 
Sbjct: 28  ICSGCEGPI----WGPCYSCTSCYFFLHKKCAELPREIK-----RRIHRRHPLHLLAKSP 78

Query: 209 VHFPLT-DAIEKQFIKAI--------SLTDDTAIAPDYID---HWAHKDHPLVLSDQLKK 352
                + D   K F   +         L    A  P + +    +AHKDHPL+L+++ + 
Sbjct: 79  YKGKYSCDRCYKTFNSFVYHCSFCKFDLDIKCAFQPGFFEVDSQFAHKDHPLILNEEQEY 138

Query: 353 SNAIEMANRDDDQMLCDGCVRPILIDDQFYGCVQCNFFLHKYCAELPPKLQHASHP 520
             A          ++C  C  P+      Y C  CNFFLHK CAELPP+++   HP
Sbjct: 139 HGA---------GVVCSLCKEPM--SGPSYSCTSCNFFLHKKCAELPPEIKRHLHP 183



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
 Frame = +2

Query: 296 IDHWAHKDHPLVLSDQLKKSNAIEMANRDDDQMLCDGCVRPILIDDQFYGCVQCNFFLHK 475
           ++H++H DHPL+L +Q+ + +         + ++C GC  PI      Y C  C FFLHK
Sbjct: 3   VEHFSHPDHPLILVNQVLEYSC--------ELVICSGCEGPIW--GPCYSCTSCYFFLHK 52

Query: 476 YCAELPPKLQ---HASHP 520
            CAELP +++   H  HP
Sbjct: 53  KCAELPREIKRRIHRRHP 70


>ref|NP_199385.2| cysteine/histidine-rich C1 domain-containing protein [Arabidopsis
           thaliana] gi|332007907|gb|AED95290.1|
           cysteine/histidine-rich C1 domain-containing protein
           [Arabidopsis thaliana]
          Length = 560

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 50/161 (31%), Positives = 72/161 (44%), Gaps = 1/161 (0%)
 Frame = +2

Query: 38  CSICGDKVHHYKWLYYCANCRFFA-HIKCAXXXXXXXXXXXXKNVEDAEKNHLDESNMVH 214
           C +C  K+      ++C+ C  +A H KCA            K +ED  ++  +E     
Sbjct: 199 CGVCRQKMDWTLGAFFCSRCPNYAVHSKCATREDVWDG----KELEDKPEDEGEED---- 250

Query: 215 FPLTDAIEKQFIKAISLTDDTAIAPDYIDHWAHKDHPLVLSDQLKKSNAIEMANRDDDQM 394
            P     EK+ I                 H++H++H L L D     NA      D ++M
Sbjct: 251 -PYKVINEKEII-----------------HFSHEEHNLKLGDD---DNAA-----DYEKM 284

Query: 395 LCDGCVRPILIDDQFYGCVQCNFFLHKYCAELPPKLQHASH 517
            CD C+RPI   D F+ CV+C FFLHK CA LP K ++  H
Sbjct: 285 WCDACIRPI-DSDPFFKCVECKFFLHKVCASLPRKKRNILH 324


>dbj|BAB09215.1| CHP-rich zinc finger protein-like [Arabidopsis thaliana]
          Length = 519

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 50/161 (31%), Positives = 72/161 (44%), Gaps = 1/161 (0%)
 Frame = +2

Query: 38  CSICGDKVHHYKWLYYCANCRFFA-HIKCAXXXXXXXXXXXXKNVEDAEKNHLDESNMVH 214
           C +C  K+      ++C+ C  +A H KCA            K +ED  ++  +E     
Sbjct: 199 CGVCRQKMDWTLGAFFCSRCPNYAVHSKCATREDVWDG----KELEDKPEDEGEED---- 250

Query: 215 FPLTDAIEKQFIKAISLTDDTAIAPDYIDHWAHKDHPLVLSDQLKKSNAIEMANRDDDQM 394
            P     EK+ I                 H++H++H L L D     NA      D ++M
Sbjct: 251 -PYKVINEKEII-----------------HFSHEEHNLKLGDD---DNAA-----DYEKM 284

Query: 395 LCDGCVRPILIDDQFYGCVQCNFFLHKYCAELPPKLQHASH 517
            CD C+RPI   D F+ CV+C FFLHK CA LP K ++  H
Sbjct: 285 WCDACIRPI-DSDPFFKCVECKFFLHKVCASLPRKKRNILH 324


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