BLASTX nr result

ID: Panax21_contig00032290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032290
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK93021.1| unknown [Populus trichocarpa]                          156   3e-36
ref|XP_002511558.1| conserved hypothetical protein [Ricinus comm...   153   3e-35
ref|XP_002318604.1| predicted protein [Populus trichocarpa] gi|2...   144   2e-32
dbj|BAH58381.1| AtEB1b-like protein [Nicotiana tabacum]               141   9e-32
ref|XP_003523029.1| PREDICTED: microtubule-associated protein RP...   130   2e-28

>gb|ABK93021.1| unknown [Populus trichocarpa]
          Length = 276

 Score =  156 bits (395), Expect = 3e-36
 Identities = 78/128 (60%), Positives = 102/128 (79%)
 Frame = -1

Query: 639 RSSKGFKKNSKSLQANNSYNSGSGDGMGVNKISGTKQGKTNAPAIGANFMGESQNLTKEI 460
           R+SKG +K +KSLQANN +NS SGD + +NK+SG KQG+ +A A GA +  E Q L+KE+
Sbjct: 139 RNSKGSQKTTKSLQANNLHNSASGDTVDLNKMSGPKQGRGSAVAGGATYSEEIQALSKEV 198

Query: 459 TELKLSVDHLENERDFYFTKLRDIELLCQNPKLENLPMSLEIKKILYAADVKESAPAEAE 280
           T LKLSVDHLE ERDFYF KLRDIE+LCQ P++E+LPM++ IKKILYA D KESA  EA+
Sbjct: 199 TNLKLSVDHLEKERDFYFAKLRDIEILCQIPEMEDLPMTVAIKKILYADDAKESALEEAQ 258

Query: 279 EAVGQSVD 256
           E + ++++
Sbjct: 259 EYLSEAIN 266


>ref|XP_002511558.1| conserved hypothetical protein [Ricinus communis]
           gi|223550673|gb|EEF52160.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 249

 Score =  153 bits (386), Expect = 3e-35
 Identities = 79/128 (61%), Positives = 103/128 (80%)
 Frame = -1

Query: 639 RSSKGFKKNSKSLQANNSYNSGSGDGMGVNKISGTKQGKTNAPAIGANFMGESQNLTKEI 460
           R+SKG +K SKSLQ+NN +NSG  + +G++K+SG KQG+ +  A GAN   E Q L+KE+
Sbjct: 114 RNSKGCQKTSKSLQSNNMHNSG--EPVGLSKMSGPKQGRGSTVAGGANSSVEIQTLSKEV 171

Query: 459 TELKLSVDHLENERDFYFTKLRDIELLCQNPKLENLPMSLEIKKILYAADVKESAPAEAE 280
           T+LKLSVDHLE ERDFYF KLRDIELLCQ P+LE++PM++ IKKILYAAD KESA  EA+
Sbjct: 172 TDLKLSVDHLEKERDFYFAKLRDIELLCQTPELEDIPMAVAIKKILYAADAKESALEEAQ 231

Query: 279 EAVGQSVD 256
           E + Q+++
Sbjct: 232 EYLYQAMN 239


>ref|XP_002318604.1| predicted protein [Populus trichocarpa] gi|222859277|gb|EEE96824.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  144 bits (362), Expect = 2e-32
 Identities = 75/128 (58%), Positives = 98/128 (76%)
 Frame = -1

Query: 639 RSSKGFKKNSKSLQANNSYNSGSGDGMGVNKISGTKQGKTNAPAIGANFMGESQNLTKEI 460
           R+SKG +K +KSLQANN +NS S D + +NK+SG    K +A A GA +  E Q L+KE+
Sbjct: 139 RNSKGSQKTTKSLQANNLHNSASSDTVDLNKMSG----KGSAVAGGATYSEEIQALSKEV 194

Query: 459 TELKLSVDHLENERDFYFTKLRDIELLCQNPKLENLPMSLEIKKILYAADVKESAPAEAE 280
           T LKLSVDHLE ERDFYF KLRDIE+LCQ P++E+LPM++ IKKILYA D KESA  EA+
Sbjct: 195 TNLKLSVDHLEKERDFYFAKLRDIEILCQIPEMEDLPMTVAIKKILYADDAKESALEEAQ 254

Query: 279 EAVGQSVD 256
           E + ++++
Sbjct: 255 EYLSEAIN 262


>dbj|BAH58381.1| AtEB1b-like protein [Nicotiana tabacum]
          Length = 267

 Score =  141 bits (356), Expect = 9e-32
 Identities = 73/129 (56%), Positives = 99/129 (76%), Gaps = 1/129 (0%)
 Frame = -1

Query: 639 RSSKGFKKNSKSLQANNSYNSGSGDGMGVNKISGTKQGKTNAPAIGA-NFMGESQNLTKE 463
           R+ KG ++ +KSLQ NN +N G G+   + +I+G KQG+++ P +G  N   E Q L+KE
Sbjct: 138 RNVKGSQRYAKSLQTNNCHNPGLGED--ITRITGIKQGRSS-PVMGVVNSSAEIQALSKE 194

Query: 462 ITELKLSVDHLENERDFYFTKLRDIELLCQNPKLENLPMSLEIKKILYAADVKESAPAEA 283
           +T+LKLSVDHLE ERDFYF KLRDIE+LCQ P+L+N+PM++ +KKILYAAD +ESA AEA
Sbjct: 195 VTDLKLSVDHLEKERDFYFAKLRDIEILCQTPELDNVPMAVAVKKILYAADARESALAEA 254

Query: 282 EEAVGQSVD 256
           +E   +SVD
Sbjct: 255 QEFPSESVD 263


>ref|XP_003523029.1| PREDICTED: microtubule-associated protein RP/EB family member
           1-like isoform 2 [Glycine max]
          Length = 287

 Score =  130 bits (328), Expect = 2e-28
 Identities = 72/132 (54%), Positives = 94/132 (71%), Gaps = 4/132 (3%)
 Frame = -1

Query: 639 RSSKGFKKNSKSLQANNSYNSGSGDGMGVNK----ISGTKQGKTNAPAIGANFMGESQNL 472
           R+ KG K +SKSLQ N   +SGSGD +  N+    + G+KQ +++  A G N   E Q L
Sbjct: 139 RNVKGLK-SSKSLQTNTMNHSGSGDSLSTNETFSLLIGSKQLRSSGGADGVNSSAEIQAL 197

Query: 471 TKEITELKLSVDHLENERDFYFTKLRDIELLCQNPKLENLPMSLEIKKILYAADVKESAP 292
           +K++++LKLSVDHLE ERDFYF KLRDIE+LCQ  +LEN PMSL IKKILYAAD K SA 
Sbjct: 198 SKQVSDLKLSVDHLEKERDFYFAKLRDIEILCQASELENDPMSLAIKKILYAADAKGSAL 257

Query: 291 AEAEEAVGQSVD 256
            EA+E + + ++
Sbjct: 258 DEAQEYLNEVIN 269


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