BLASTX nr result

ID: Panax21_contig00032263 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032263
         (790 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510734.1| DNA binding protein, putative [Ricinus commu...   146   4e-33
ref|XP_002273442.1| PREDICTED: putative DNA-binding protein ESCA...   144   3e-32
ref|XP_002307001.1| predicted protein [Populus trichocarpa] gi|2...   142   8e-32
ref|XP_002280017.1| PREDICTED: putative DNA-binding protein ESCA...   136   5e-30
ref|XP_002301896.1| predicted protein [Populus trichocarpa] gi|2...   136   6e-30

>ref|XP_002510734.1| DNA binding protein, putative [Ricinus communis]
           gi|223551435|gb|EEF52921.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 289

 Score =  146 bits (369), Expect = 4e-33
 Identities = 79/132 (59%), Positives = 87/132 (65%)
 Frame = +1

Query: 394 RRQRGRPQGSKNKPKPPIIVTRDSPNALRSHVLEISGGADVMETVSIYAXXXXXXXXXXX 573
           RR RGRP GSKNKPKPPIIVTRDSPNALRSHVLE+S G+D+ME+VSIYA           
Sbjct: 71  RRPRGRPAGSKNKPKPPIIVTRDSPNALRSHVLEVSTGSDIMESVSIYARKRGRGVCVLS 130

Query: 574 XXXXXXNINLRQPAAPSGSVVTLHGRFEILSLSGTVLXXXXXXXXXXMSIFLXXXXXXXX 753
                 N+ LRQPA+P+GSVVTLHGRFEILSLSGTVL          +SIFL        
Sbjct: 131 GNGTVANVTLRQPASPAGSVVTLHGRFEILSLSGTVLPPPAPPGAGGLSIFLSGGQGQVV 190

Query: 754 XXXXXXPLMASG 789
                 PLMASG
Sbjct: 191 GGSVVGPLMASG 202


>ref|XP_002273442.1| PREDICTED: putative DNA-binding protein ESCAROLA [Vitis vinifera]
          Length = 292

 Score =  144 bits (362), Expect = 3e-32
 Identities = 89/203 (43%), Positives = 101/203 (49%), Gaps = 14/203 (6%)
 Frame = +1

Query: 223 MAGY--GGNSRYIHHLLPSDFH------------HPPXXXXXXXXXXXXXHKAQVDVXXX 360
           M GY  G  SRY+H LL  + H                             +A  +    
Sbjct: 1   MEGYEPGSGSRYVHQLLGPELHLQRPSSLPQHQATQQPSDSRDESPDDQEQRADTEEAAA 60

Query: 361 XXXXXXXXXXXRRQRGRPQGSKNKPKPPIIVTRDSPNALRSHVLEISGGADVMETVSIYA 540
                      RR RGRP GSKNKPKPPIIVTRDSPNALRSHVLE++ GADVME+V  YA
Sbjct: 61  ASSGGATTSSNRRPRGRPPGSKNKPKPPIIVTRDSPNALRSHVLEVAAGADVMESVLNYA 120

Query: 541 XXXXXXXXXXXXXXXXXNINLRQPAAPSGSVVTLHGRFEILSLSGTVLXXXXXXXXXXMS 720
                            N+ LRQPA+P+GS+VTLHGRFEILSLSGTVL          +S
Sbjct: 121 RRRGRGVCVLSGGGTVMNVTLRQPASPAGSIVTLHGRFEILSLSGTVLPPPAPPSAGGLS 180

Query: 721 IFLXXXXXXXXXXXXXXPLMASG 789
           IFL              PLMASG
Sbjct: 181 IFLSGGQGQVVGGSVVGPLMASG 203


>ref|XP_002307001.1| predicted protein [Populus trichocarpa] gi|222856450|gb|EEE93997.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  142 bits (358), Expect = 8e-32
 Identities = 76/132 (57%), Positives = 86/132 (65%)
 Frame = +1

Query: 394 RRQRGRPQGSKNKPKPPIIVTRDSPNALRSHVLEISGGADVMETVSIYAXXXXXXXXXXX 573
           RR RGRP GSKNKPKPPIIVTRDSPNALRSHV+EIS GAD++E+VS YA           
Sbjct: 1   RRPRGRPAGSKNKPKPPIIVTRDSPNALRSHVIEISNGADIVESVSTYARKRGRGVCVLS 60

Query: 574 XXXXXXNINLRQPAAPSGSVVTLHGRFEILSLSGTVLXXXXXXXXXXMSIFLXXXXXXXX 753
                 N+ LRQPA+P+GSV+TLHGRFEILSLSGTVL          +SIFL        
Sbjct: 61  GSGTVANVTLRQPASPAGSVLTLHGRFEILSLSGTVLPPPAPPGAGGLSIFLSGGQGQVV 120

Query: 754 XXXXXXPLMASG 789
                 PLMA+G
Sbjct: 121 GGNVVGPLMAAG 132


>ref|XP_002280017.1| PREDICTED: putative DNA-binding protein ESCAROLA [Vitis vinifera]
          Length = 289

 Score =  136 bits (343), Expect = 5e-30
 Identities = 88/200 (44%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
 Frame = +1

Query: 223 MAGY--GGNSRYIHHLL---------PSDFHHPPXXXXXXXXXXXXXHKAQVDVXXXXXX 369
           MAG   G  SRYIH L          P   H PP                  D       
Sbjct: 1   MAGMEQGAGSRYIHQLFRPELQLERTPQQPHQPPQLNDSGDSPENE------DRTDPDGS 54

Query: 370 XXXXXXXXRRQRGRPQGSKNKPKPPIIVTRDSPNALRSHVLEISGGADVMETVSIYAXXX 549
                   RR RGRP GSKNK KPPII+TRDSPNALRSHVLEIS GAD++E+VS YA   
Sbjct: 55  PGAATTSSRRPRGRPPGSKNKAKPPIIITRDSPNALRSHVLEISAGADIVESVSNYARRR 114

Query: 550 XXXXXXXXXXXXXXNINLRQPAAPSGSVVTLHGRFEILSLSGTVLXXXXXXXXXXMSIFL 729
                         ++ LRQPAAPSGSVVTLHGRFEILSL+GT L          ++I+L
Sbjct: 115 GRGVCILSGGGAVTDVTLRQPAAPSGSVVTLHGRFEILSLTGTALPPPAPPGAGGLTIYL 174

Query: 730 XXXXXXXXXXXXXXPLMASG 789
                         PL+ASG
Sbjct: 175 GGGQGQVVGGRVVGPLVASG 194


>ref|XP_002301896.1| predicted protein [Populus trichocarpa] gi|222843622|gb|EEE81169.1|
           predicted protein [Populus trichocarpa]
          Length = 158

 Score =  136 bits (342), Expect = 6e-30
 Identities = 74/131 (56%), Positives = 84/131 (64%)
 Frame = +1

Query: 397 RQRGRPQGSKNKPKPPIIVTRDSPNALRSHVLEISGGADVMETVSIYAXXXXXXXXXXXX 576
           R RGRP GSKNKPKPPIIVTRDSPNALRSHVLE+S GAD++E+VS YA            
Sbjct: 3   RPRGRPAGSKNKPKPPIIVTRDSPNALRSHVLEVSSGADIVESVSNYARKRGIGVCVLSG 62

Query: 577 XXXXXNINLRQPAAPSGSVVTLHGRFEILSLSGTVLXXXXXXXXXXMSIFLXXXXXXXXX 756
                N+ LRQPA+P+GSV+TLHGRFEILSLSGTVL          +SIFL         
Sbjct: 63  SGSVANVTLRQPASPAGSVLTLHGRFEILSLSGTVLPPPAPPGAGGLSIFLSGGQGQVVG 122

Query: 757 XXXXXPLMASG 789
                 LMA+G
Sbjct: 123 GNVVGLLMAAG 133


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