BLASTX nr result

ID: Panax21_contig00032152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032152
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270283.1| PREDICTED: chromatin structure-remodeling co...   142   2e-45
ref|XP_004147636.1| PREDICTED: chromatin structure-remodeling co...   146   3e-45
ref|NP_001241294.1| chromatin structure-remodeling complex prote...   142   2e-43
ref|XP_002519347.1| snf5, putative [Ricinus communis] gi|2235416...   135   1e-42
gb|ABF85669.1| SNF5 [Pisum sativum]                                   137   2e-41

>ref|XP_002270283.1| PREDICTED: chromatin structure-remodeling complex protein BSH
           [Vitis vinifera] gi|297736833|emb|CBI26034.3| unnamed
           protein product [Vitis vinifera]
          Length = 243

 Score =  142 bits (358), Expect(2) = 2e-45
 Identities = 69/75 (92%), Positives = 71/75 (94%)
 Frame = +3

Query: 192 GQRFRDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFVTQIAQSIQSQLTEFRSLEGQDMH 371
           G RF+DAFTWNPSDPDSEVVVFAKRTVKDLKLPPAF+TQIAQSIQSQL EFRS EGQDM 
Sbjct: 34  GHRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLAEFRSFEGQDMQ 93

Query: 372 TGEKIVPIKLDLRVN 416
           TGEKIVPIKLDLRVN
Sbjct: 94  TGEKIVPIKLDLRVN 108



 Score = 65.5 bits (158), Expect(2) = 2e-45
 Identities = 30/34 (88%), Positives = 33/34 (97%)
 Frame = +1

Query: 28  SSSKNPVKFRIPTADNLVPIRLDIEIDGQRFRDA 129
           +SSKNPVKFR+PTADNLVPIRLDIEIDG RF+DA
Sbjct: 7   TSSKNPVKFRMPTADNLVPIRLDIEIDGHRFKDA 40


>ref|XP_004147636.1| PREDICTED: chromatin structure-remodeling complex protein BSH-like
           [Cucumis sativus] gi|449498785|ref|XP_004160633.1|
           PREDICTED: chromatin structure-remodeling complex
           protein BSH-like [Cucumis sativus]
          Length = 240

 Score =  146 bits (369), Expect(2) = 3e-45
 Identities = 70/75 (93%), Positives = 74/75 (98%)
 Frame = +3

Query: 192 GQRFRDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFVTQIAQSIQSQLTEFRSLEGQDMH 371
           GQRF+DAFTWNPSDPDSEVVVFAKRTVKDLKLPPAF+TQIAQSIQSQLTEFRS EGQDM+
Sbjct: 34  GQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMY 93

Query: 372 TGEKIVPIKLDLRVN 416
           TGEKI+PIKLDLRVN
Sbjct: 94  TGEKIIPIKLDLRVN 108



 Score = 60.5 bits (145), Expect(2) = 3e-45
 Identities = 31/41 (75%), Positives = 35/41 (85%)
 Frame = +1

Query: 7   MKSHAAWSSSKNPVKFRIPTADNLVPIRLDIEIDGQRFRDA 129
           MK+ A+   SK P KFRIPTA+NLVPIRLDIEIDGQRF+DA
Sbjct: 1   MKASAS-PHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDA 40


>ref|NP_001241294.1| chromatin structure-remodeling complex protein BSH-like [Glycine
           max] gi|296932945|gb|ADH93593.1| SNF5-type
           chromatin-remodeling complex protein [Glycine max]
           gi|297179845|gb|ADI23919.1| SNF5 [Glycine max]
          Length = 240

 Score =  142 bits (358), Expect(2) = 2e-43
 Identities = 69/75 (92%), Positives = 73/75 (97%)
 Frame = +3

Query: 192 GQRFRDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFVTQIAQSIQSQLTEFRSLEGQDMH 371
           GQR++DAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFVTQIAQSIQSQL+EFRS EGQDM+
Sbjct: 34  GQRYKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFVTQIAQSIQSQLSEFRSYEGQDMY 93

Query: 372 TGEKIVPIKLDLRVN 416
            GEKIVPIKLDLRVN
Sbjct: 94  AGEKIVPIKLDLRVN 108



 Score = 58.5 bits (140), Expect(2) = 2e-43
 Identities = 25/31 (80%), Positives = 31/31 (100%)
 Frame = +1

Query: 37  KNPVKFRIPTADNLVPIRLDIEIDGQRFRDA 129
           +NPVKFR+PTA+NLVPIRLDIEI+GQR++DA
Sbjct: 10  RNPVKFRMPTAENLVPIRLDIEIEGQRYKDA 40


>ref|XP_002519347.1| snf5, putative [Ricinus communis] gi|223541662|gb|EEF43211.1| snf5,
           putative [Ricinus communis]
          Length = 241

 Score =  135 bits (341), Expect(2) = 1e-42
 Identities = 66/75 (88%), Positives = 69/75 (92%)
 Frame = +3

Query: 192 GQRFRDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFVTQIAQSIQSQLTEFRSLEGQDMH 371
           G RF+DAFTWNPSDPDSEVVVFAKRT KDLKLPPAFV QIAQSIQ+QL+EFRS EGQDM 
Sbjct: 35  GHRFKDAFTWNPSDPDSEVVVFAKRTAKDLKLPPAFVMQIAQSIQTQLSEFRSYEGQDMF 94

Query: 372 TGEKIVPIKLDLRVN 416
           TGEK VPIKLDLRVN
Sbjct: 95  TGEKFVPIKLDLRVN 109



 Score = 62.8 bits (151), Expect(2) = 1e-42
 Identities = 31/41 (75%), Positives = 34/41 (82%)
 Frame = +1

Query: 7   MKSHAAWSSSKNPVKFRIPTADNLVPIRLDIEIDGQRFRDA 129
           MK   + SSSK PVKFR+PTA NLVPIRLDIEIDG RF+DA
Sbjct: 1   MKGLPSTSSSKLPVKFRMPTAQNLVPIRLDIEIDGHRFKDA 41


>gb|ABF85669.1| SNF5 [Pisum sativum]
          Length = 240

 Score =  137 bits (346), Expect(2) = 2e-41
 Identities = 66/75 (88%), Positives = 70/75 (93%)
 Frame = +3

Query: 192 GQRFRDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFVTQIAQSIQSQLTEFRSLEGQDMH 371
           G R++DAFTWNPSDPDSEVVVFAKRTVKDLKLPP FVTQIAQSIQSQL EFRS EGQDM+
Sbjct: 34  GHRYKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPPFVTQIAQSIQSQLAEFRSYEGQDMY 93

Query: 372 TGEKIVPIKLDLRVN 416
            GEKI+PIKLDLRVN
Sbjct: 94  AGEKIIPIKLDLRVN 108



 Score = 56.6 bits (135), Expect(2) = 2e-41
 Identities = 23/31 (74%), Positives = 30/31 (96%)
 Frame = +1

Query: 37  KNPVKFRIPTADNLVPIRLDIEIDGQRFRDA 129
           +NPVKFR+PT++NLVP+RLDIEIDG R++DA
Sbjct: 10  RNPVKFRMPTSENLVPVRLDIEIDGHRYKDA 40


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