BLASTX nr result

ID: Panax21_contig00032117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032117
         (1252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265556.2| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   253   e-126
ref|XP_002316157.1| predicted protein [Populus trichocarpa] gi|2...   254   e-125
ref|XP_003532904.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   246   e-121
emb|CBI24136.3| unnamed protein product [Vitis vinifera]              228   e-118
ref|XP_003546661.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   242   e-116

>ref|XP_002265556.2| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Vitis vinifera]
          Length = 450

 Score =  253 bits (645), Expect(2) = e-126
 Identities = 121/155 (78%), Positives = 132/155 (85%)
 Frame = -2

Query: 870 QKKPSSSSYPDYTASTAGNNSSGLYKKYGFIPDNFSTLDQVTAALRESGLESSNLIIGID 691
           +K+   +S+    ASTA   +     KY FIPDNFST++QVT ALRESGLESSNLIIGID
Sbjct: 56  EKEKGGASHASSAASTASKPN-----KYSFIPDNFSTIEQVTNALRESGLESSNLIIGID 110

Query: 690 FTKSNEWTGKVSFNNRSLHAIGDTPNPYEKAVSIVGKTLAPFDEDNLIPCFGFGDATTHD 511
           FTKSNEWTGK SFNNRSLHAIGDTPNPYEKA+SI+GKTLAPFDEDNLIPCFGFGDATTHD
Sbjct: 111 FTKSNEWTGKASFNNRSLHAIGDTPNPYEKAISIIGKTLAPFDEDNLIPCFGFGDATTHD 170

Query: 510 QEVFSFHSDHSPCHGFEEVLDCYKKVVPYLQLSGP 406
            EVFSFH D SPCHGFEEVL CYK++VP LQLSGP
Sbjct: 171 SEVFSFHDDRSPCHGFEEVLACYKRIVPNLQLSGP 205



 Score =  228 bits (581), Expect(2) = e-126
 Identities = 110/134 (82%), Positives = 124/134 (92%)
 Frame = -3

Query: 404 SYGPVVDAAIDIVERSGGQYHILVIIADGQVTRSVNTNEREASPQEEKTIKSIVTASSYP 225
           SY PVV+AAIDIVE+SGGQYH+LVIIADGQVTRSVN N++E SPQEEKTI SIVTASSYP
Sbjct: 207 SYAPVVEAAIDIVEKSGGQYHVLVIIADGQVTRSVNANDKELSPQEEKTINSIVTASSYP 266

Query: 224 LSIVLIGVGDGPWEDMRKFDDKIPAREFDNFQFVNFTDIMSKDVTPSVKETAFAVAALME 45
           LSI+L+GVGDGPW+DM+KFDDKIPAR FDNFQFVNFT IMSK+ +PS KETAFA+AALME
Sbjct: 267 LSIILVGVGDGPWDDMKKFDDKIPARGFDNFQFVNFTAIMSKNASPSEKETAFALAALME 326

Query: 44  IPIQYRAATEFGIV 3
           IPIQY+A  EFGI+
Sbjct: 327 IPIQYKATVEFGIL 340


>ref|XP_002316157.1| predicted protein [Populus trichocarpa] gi|222865197|gb|EEF02328.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score =  254 bits (648), Expect(2) = e-125
 Identities = 115/130 (88%), Positives = 126/130 (96%)
 Frame = -2

Query: 795 KKYGFIPDNFSTLDQVTAALRESGLESSNLIIGIDFTKSNEWTGKVSFNNRSLHAIGDTP 616
           +KY FIPDNFS+L+QVT ALRE+GLESSNL++GIDFTKSNEWTGKVSFNNRSLHAIGDTP
Sbjct: 44  QKYSFIPDNFSSLEQVTTALREAGLESSNLVVGIDFTKSNEWTGKVSFNNRSLHAIGDTP 103

Query: 615 NPYEKAVSIVGKTLAPFDEDNLIPCFGFGDATTHDQEVFSFHSDHSPCHGFEEVLDCYKK 436
           NPYEKA+SI+GKT+APFDEDNLIPCFGFGDATTHDQEVFSFHSDHSPCHGFEEVL CYKK
Sbjct: 104 NPYEKAISIIGKTMAPFDEDNLIPCFGFGDATTHDQEVFSFHSDHSPCHGFEEVLACYKK 163

Query: 435 VVPYLQLSGP 406
           +VP L+LSGP
Sbjct: 164 IVPNLRLSGP 173



 Score =  223 bits (568), Expect(2) = e-125
 Identities = 106/134 (79%), Positives = 125/134 (93%)
 Frame = -3

Query: 404 SYGPVVDAAIDIVERSGGQYHILVIIADGQVTRSVNTNEREASPQEEKTIKSIVTASSYP 225
           SYGPV++AAIDIVE+SGGQYH+L+IIADGQVTRSV+T + E SPQEE+TIK+IV ASSYP
Sbjct: 175 SYGPVIEAAIDIVEKSGGQYHVLLIIADGQVTRSVDTGDGEMSPQEEQTIKAIVDASSYP 234

Query: 224 LSIVLIGVGDGPWEDMRKFDDKIPAREFDNFQFVNFTDIMSKDVTPSVKETAFAVAALME 45
           LSI+L+GVGDGPWEDM++FDDK+PAREFDNFQFVNFT IMSK+ T S KETAFA+AALME
Sbjct: 235 LSIILVGVGDGPWEDMKRFDDKLPAREFDNFQFVNFTAIMSKNATISEKETAFALAALME 294

Query: 44  IPIQYRAATEFGIV 3
           IP+QY+AA EFGI+
Sbjct: 295 IPLQYKAAVEFGII 308


>ref|XP_003532904.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Glycine max]
          Length = 451

 Score =  246 bits (629), Expect(2) = e-121
 Identities = 118/168 (70%), Positives = 136/168 (80%)
 Frame = -2

Query: 909 PPNMSFKGVVGTVQKKPSSSSYPDYTASTAGNNSSGLYKKYGFIPDNFSTLDQVTAALRE 730
           PP      +  ++ KKPS +      +S+  NN+    KKY  I DNFSTL+QVT ALR+
Sbjct: 63  PPPPPPPALPQSMSKKPSFARVFAKQSSSVMNNNQSAAKKYALIRDNFSTLEQVTTALRK 122

Query: 729 SGLESSNLIIGIDFTKSNEWTGKVSFNNRSLHAIGDTPNPYEKAVSIVGKTLAPFDEDNL 550
            GLESSNLI+GIDFTKSNEWTG++SFN RSLHAIG TPNPYEKA+SI+GKTLAPFD+DNL
Sbjct: 123 EGLESSNLILGIDFTKSNEWTGRISFNKRSLHAIGSTPNPYEKAISIIGKTLAPFDDDNL 182

Query: 549 IPCFGFGDATTHDQEVFSFHSDHSPCHGFEEVLDCYKKVVPYLQLSGP 406
           IPCFGFGDATTHDQEVFSFHSDHSP HGFEEVL CY+K+VP L+LSGP
Sbjct: 183 IPCFGFGDATTHDQEVFSFHSDHSPYHGFEEVLACYQKIVPNLKLSGP 230



 Score =  216 bits (549), Expect(2) = e-121
 Identities = 100/134 (74%), Positives = 124/134 (92%)
 Frame = -3

Query: 404 SYGPVVDAAIDIVERSGGQYHILVIIADGQVTRSVNTNEREASPQEEKTIKSIVTASSYP 225
           SY PV++AAIDIVE++ GQ+H+LVI+ADGQVTRSV+T++ E SPQEEKTIK++V AS+YP
Sbjct: 232 SYAPVIEAAIDIVEKNRGQFHVLVIVADGQVTRSVDTSDGELSPQEEKTIKAVVDASAYP 291

Query: 224 LSIVLIGVGDGPWEDMRKFDDKIPAREFDNFQFVNFTDIMSKDVTPSVKETAFAVAALME 45
           L+IVL+GVGDGPWEDMRKFDDKIPAR++DNFQFVNFT+IMSK+++PS KE AFA+AALME
Sbjct: 292 LAIVLVGVGDGPWEDMRKFDDKIPARDYDNFQFVNFTEIMSKNISPSEKEAAFALAALME 351

Query: 44  IPIQYRAATEFGIV 3
           IP QY+A  EFGI+
Sbjct: 352 IPFQYKATMEFGIL 365


>emb|CBI24136.3| unnamed protein product [Vitis vinifera]
          Length = 5665

 Score =  228 bits (581), Expect(2) = e-118
 Identities = 110/134 (82%), Positives = 124/134 (92%)
 Frame = -3

Query: 404  SYGPVVDAAIDIVERSGGQYHILVIIADGQVTRSVNTNEREASPQEEKTIKSIVTASSYP 225
            SY PVV+AAIDIVE+SGGQYH+LVIIADGQVTRSVN N++E SPQEEKTI SIVTASSYP
Sbjct: 5422 SYAPVVEAAIDIVEKSGGQYHVLVIIADGQVTRSVNANDKELSPQEEKTINSIVTASSYP 5481

Query: 224  LSIVLIGVGDGPWEDMRKFDDKIPAREFDNFQFVNFTDIMSKDVTPSVKETAFAVAALME 45
            LSI+L+GVGDGPW+DM+KFDDKIPAR FDNFQFVNFT IMSK+ +PS KETAFA+AALME
Sbjct: 5482 LSIILVGVGDGPWDDMKKFDDKIPARGFDNFQFVNFTAIMSKNASPSEKETAFALAALME 5541

Query: 44   IPIQYRAATEFGIV 3
            IPIQY+A  EFGI+
Sbjct: 5542 IPIQYKATVEFGIL 5555



 Score =  223 bits (569), Expect(2) = e-118
 Identities = 104/115 (90%), Positives = 108/115 (93%)
 Frame = -2

Query: 750  VTAALRESGLESSNLIIGIDFTKSNEWTGKVSFNNRSLHAIGDTPNPYEKAVSIVGKTLA 571
            VT ALRESGLESSNLIIGIDFTKSNEWTGK SFNNRSLHAIGDTPNPYEKA+SI+GKTLA
Sbjct: 5306 VTNALRESGLESSNLIIGIDFTKSNEWTGKASFNNRSLHAIGDTPNPYEKAISIIGKTLA 5365

Query: 570  PFDEDNLIPCFGFGDATTHDQEVFSFHSDHSPCHGFEEVLDCYKKVVPYLQLSGP 406
            PFDEDNLIPCFGFGDATTHD EVFSFH D SPCHGFEEVL CYK++VP LQLSGP
Sbjct: 5366 PFDEDNLIPCFGFGDATTHDSEVFSFHDDRSPCHGFEEVLACYKRIVPNLQLSGP 5420


>ref|XP_003546661.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Glycine max]
          Length = 417

 Score =  242 bits (617), Expect(2) = e-116
 Identities = 115/156 (73%), Positives = 131/156 (83%), Gaps = 3/156 (1%)
 Frame = -2

Query: 864 KPSSSSYPDYTASTAGNNSSGLY---KKYGFIPDNFSTLDQVTAALRESGLESSNLIIGI 694
           +P     P   A+ + N  SG     +KY  IPDNF+TL+QVT ALR+ GLESSNL++GI
Sbjct: 37  EPPLPREPPPAAAMSLNKGSGKLSAKEKYALIPDNFTTLEQVTIALRKEGLESSNLVLGI 96

Query: 693 DFTKSNEWTGKVSFNNRSLHAIGDTPNPYEKAVSIVGKTLAPFDEDNLIPCFGFGDATTH 514
           DFTKSNEWTG VSFNNRSLHAIG TPNPYEKA+SI+GKTLAPFD+DNLIPCFGFGDATTH
Sbjct: 97  DFTKSNEWTGSVSFNNRSLHAIGSTPNPYEKAISIIGKTLAPFDDDNLIPCFGFGDATTH 156

Query: 513 DQEVFSFHSDHSPCHGFEEVLDCYKKVVPYLQLSGP 406
           DQEVFSFHSD+SPCHGFEEVL CY+K+VP L+LSGP
Sbjct: 157 DQEVFSFHSDNSPCHGFEEVLACYQKIVPNLRLSGP 192



 Score =  206 bits (523), Expect(2) = e-116
 Identities = 97/134 (72%), Positives = 117/134 (87%)
 Frame = -3

Query: 404 SYGPVVDAAIDIVERSGGQYHILVIIADGQVTRSVNTNEREASPQEEKTIKSIVTASSYP 225
           SY PV++AAIDIVE+S GQ+H+LVI+ADGQVT S  + + E SPQE +TIK+I  ASSYP
Sbjct: 194 SYAPVIEAAIDIVEKSHGQFHVLVIVADGQVTTSAASEDGELSPQEARTIKAIADASSYP 253

Query: 224 LSIVLIGVGDGPWEDMRKFDDKIPAREFDNFQFVNFTDIMSKDVTPSVKETAFAVAALME 45
           LSI+L+GVGDGPWEDM+KFDDKIPAR+FDNFQFVNFTDIM+K  +PS KE AFA+AALME
Sbjct: 254 LSIILVGVGDGPWEDMKKFDDKIPARDFDNFQFVNFTDIMAKKSSPSEKEAAFALAALME 313

Query: 44  IPIQYRAATEFGIV 3
           IP QY+AATE G++
Sbjct: 314 IPFQYKAATELGLL 327


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