BLASTX nr result

ID: Panax21_contig00032025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032025
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16614.3| unnamed protein product [Vitis vinifera]              122   3e-26
ref|XP_002277183.1| PREDICTED: squamosa promoter-binding-like pr...   122   3e-26
ref|XP_002511636.1| LIGULELESS1 protein, putative [Ricinus commu...   121   7e-26
gb|AFC17960.1| squamosa promoter binding protein-like 8 [Betula ...   113   1e-23
gb|AEB71564.1| squamosa promoter binding protein-like protein [S...   103   1e-20

>emb|CBI16614.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score =  122 bits (306), Expect = 3e-26
 Identities = 64/107 (59%), Positives = 76/107 (71%), Gaps = 3/107 (2%)
 Frame = -2

Query: 485 NRFHLLSEFDNGKRSCRKRLADHNRRRRKTHQTNQDHNK---SHLENARNSSSENLTRXX 315
           +RFHLLSEFDNGKRSCRKRLADHNRRRRK+ Q  QD++K    HLENARNSSS+N+TR  
Sbjct: 282 SRFHLLSEFDNGKRSCRKRLADHNRRRRKSQQPIQDNHKLHQHHLENARNSSSDNITRSP 341

Query: 314 XXXXXXXXXSVTIAVSPPRISLDSFRQRSYQAPXXXXXXXXVYFSNG 174
                    SVT+AVSPPR++LD FRQR YQ          ++F +G
Sbjct: 342 PDSGAHSSSSVTVAVSPPRMTLDCFRQRPYQTTASSASSSSLFFPSG 388


>ref|XP_002277183.1| PREDICTED: squamosa promoter-binding-like protein 8 isoform 1
           [Vitis vinifera] gi|359489306|ref|XP_003633906.1|
           PREDICTED: squamosa promoter-binding-like protein 8
           isoform 2 [Vitis vinifera]
          Length = 304

 Score =  122 bits (306), Expect = 3e-26
 Identities = 64/107 (59%), Positives = 76/107 (71%), Gaps = 3/107 (2%)
 Frame = -2

Query: 485 NRFHLLSEFDNGKRSCRKRLADHNRRRRKTHQTNQDHNK---SHLENARNSSSENLTRXX 315
           +RFHLLSEFDNGKRSCRKRLADHNRRRRK+ Q  QD++K    HLENARNSSS+N+TR  
Sbjct: 198 SRFHLLSEFDNGKRSCRKRLADHNRRRRKSQQPIQDNHKLHQHHLENARNSSSDNITRSP 257

Query: 314 XXXXXXXXXSVTIAVSPPRISLDSFRQRSYQAPXXXXXXXXVYFSNG 174
                    SVT+AVSPPR++LD FRQR YQ          ++F +G
Sbjct: 258 PDSGAHSSSSVTVAVSPPRMTLDCFRQRPYQTTASSASSSSLFFPSG 304


>ref|XP_002511636.1| LIGULELESS1 protein, putative [Ricinus communis]
           gi|223548816|gb|EEF50305.1| LIGULELESS1 protein,
           putative [Ricinus communis]
          Length = 302

 Score =  121 bits (303), Expect = 7e-26
 Identities = 64/90 (71%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
 Frame = -2

Query: 485 NRFHLLSEFDNGKRSCRKRLADHNRRRRKTHQTNQDHNKSHLENARNSSSENLTR-XXXX 309
           +RFHLLSEFDNGKRSCRKRLADHNRRRRK+HQ N D NKSH E A NSSSENL R     
Sbjct: 196 SRFHLLSEFDNGKRSCRKRLADHNRRRRKSHQINHDANKSHPETATNSSSENLPRSPQDS 255

Query: 308 XXXXXXXSVTIAVSPPRISLDSFRQRSYQA 219
                  SVT+AVSPPR+ LD FRQR YQA
Sbjct: 256 GTHNSSSSVTVAVSPPRMFLDCFRQRPYQA 285


>gb|AFC17960.1| squamosa promoter binding protein-like 8 [Betula platyphylla]
          Length = 309

 Score =  113 bits (283), Expect = 1e-23
 Identities = 61/104 (58%), Positives = 70/104 (67%)
 Frame = -2

Query: 485 NRFHLLSEFDNGKRSCRKRLADHNRRRRKTHQTNQDHNKSHLENARNSSSENLTRXXXXX 306
           +RFHLLSEFDNGKRSCRKRLADHNRRRRKTHQ N +  KS  +NARN SSE   R     
Sbjct: 209 SRFHLLSEFDNGKRSCRKRLADHNRRRRKTHQPNPEQLKSQPDNARNPSSE---RSPPDS 265

Query: 305 XXXXXXSVTIAVSPPRISLDSFRQRSYQAPXXXXXXXXVYFSNG 174
                 SVT+AVSPPR+SLD FRQR +Q          ++F +G
Sbjct: 266 GAHSTSSVTVAVSPPRMSLDCFRQRPFQGTASSASSSSLFFPSG 309


>gb|AEB71564.1| squamosa promoter binding protein-like protein [Solanum chacoense]
          Length = 293

 Score =  103 bits (258), Expect = 1e-20
 Identities = 56/86 (65%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
 Frame = -2

Query: 485 NRFHLLSEFDNGKRSCRKRLADHNRRRRKTHQTN-QDHNKSHLENARNSSSENLTRXXXX 309
           +RFHLLSEFDNGKRSCRKRLADHNRRRRK  Q N ++ NKS L++ RNS S  L R    
Sbjct: 208 SRFHLLSEFDNGKRSCRKRLADHNRRRRKNQQANLENSNKSQLDSTRNSPSHTLAR-SPA 266

Query: 308 XXXXXXXSVTIAVSPPRISLDSFRQR 231
                  SVT+A+SPPRISLD FRQR
Sbjct: 267 DSGAHCSSVTVAISPPRISLDVFRQR 292


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