BLASTX nr result

ID: Panax21_contig00031869 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031869
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB02902.1| mitochondrial import inner membrane translocase s...   132   4e-29
ref|XP_002284270.1| PREDICTED: mitochondrial import inner membra...   130   1e-28
gb|ADW66158.1| mitochondrial import inner membrane translocase s...   127   7e-28
ref|XP_002322283.1| predicted protein [Populus trichocarpa] gi|1...   127   1e-27
ref|XP_002511123.1| translocase of inner mitochondrial membrane,...   125   3e-27

>gb|ADB02902.1| mitochondrial import inner membrane translocase subunit Tim8/small
           zinc finger-like protein [Jatropha curcas]
          Length = 78

 Score =  132 bits (331), Expect = 4e-29
 Identities = 61/77 (79%), Positives = 71/77 (92%)
 Frame = +1

Query: 49  MNPAAFNSPQMQDFIKQEQEKAMLNEMVAKLTNVCWDKCISSTPGSKFSSSESACLSNCA 228
           M+P+  N+ +MQ F+ QE+EKAM+NEMVAKLT+ CWDKCI+STPGSKFSSSESACLSNCA
Sbjct: 1   MDPSTLNNAEMQQFLNQEKEKAMVNEMVAKLTSECWDKCITSTPGSKFSSSESACLSNCA 60

Query: 229 QRYMDMSLIIVKRFQSM 279
           QRYMDMSLII+KRFQSM
Sbjct: 61  QRYMDMSLIIMKRFQSM 77


>ref|XP_002284270.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim8 [Vitis vinifera] gi|297734470|emb|CBI15717.3|
           unnamed protein product [Vitis vinifera]
          Length = 77

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/75 (81%), Positives = 69/75 (92%)
 Frame = +1

Query: 58  AAFNSPQMQDFIKQEQEKAMLNEMVAKLTNVCWDKCISSTPGSKFSSSESACLSNCAQRY 237
           ++ NS ++Q FI QE+EKAM+NEMVAKLT VCWDKCI+STPGSKFSSSES CLSNCAQRY
Sbjct: 3   SSLNSAELQHFISQEKEKAMVNEMVAKLTTVCWDKCITSTPGSKFSSSESTCLSNCAQRY 62

Query: 238 MDMSLIIVKRFQSMQ 282
           MDMSLII+KRFQSMQ
Sbjct: 63  MDMSLIIMKRFQSMQ 77


>gb|ADW66158.1| mitochondrial import inner membrane translocase subunit [Solanum
           nigrum]
          Length = 78

 Score =  127 bits (320), Expect = 7e-28
 Identities = 56/78 (71%), Positives = 72/78 (92%)
 Frame = +1

Query: 49  MNPAAFNSPQMQDFIKQEQEKAMLNEMVAKLTNVCWDKCISSTPGSKFSSSESACLSNCA 228
           M+P+A  SP++Q+F+ QE+E+A++NEMV KLT+ CWDKCI+ TPGSKFSSSES+CL+NCA
Sbjct: 1   MDPSALQSPELQNFLNQEKERALINEMVGKLTSSCWDKCITGTPGSKFSSSESSCLTNCA 60

Query: 229 QRYMDMSLIIVKRFQSMQ 282
           QRYM+MSLIIVKRFQ+MQ
Sbjct: 61  QRYMEMSLIIVKRFQNMQ 78


>ref|XP_002322283.1| predicted protein [Populus trichocarpa] gi|118483366|gb|ABK93584.1|
           unknown [Populus trichocarpa]
           gi|222869279|gb|EEF06410.1| predicted protein [Populus
           trichocarpa]
          Length = 78

 Score =  127 bits (318), Expect = 1e-27
 Identities = 57/77 (74%), Positives = 72/77 (93%)
 Frame = +1

Query: 49  MNPAAFNSPQMQDFIKQEQEKAMLNEMVAKLTNVCWDKCISSTPGSKFSSSESACLSNCA 228
           M+P++ NS +++ F+ QE+E+AM+NEMVAKLT+ CWDKCI+S+PGSKFSSSES+CLSNCA
Sbjct: 1   MDPSSVNSAELERFLNQEKERAMVNEMVAKLTSACWDKCITSSPGSKFSSSESSCLSNCA 60

Query: 229 QRYMDMSLIIVKRFQSM 279
           QRYMDMSLII+KRFQSM
Sbjct: 61  QRYMDMSLIIMKRFQSM 77


>ref|XP_002511123.1| translocase of inner mitochondrial membrane, putative [Ricinus
           communis] gi|223550238|gb|EEF51725.1| translocase of
           inner mitochondrial membrane, putative [Ricinus
           communis]
          Length = 78

 Score =  125 bits (315), Expect = 3e-27
 Identities = 58/77 (75%), Positives = 70/77 (90%)
 Frame = +1

Query: 49  MNPAAFNSPQMQDFIKQEQEKAMLNEMVAKLTNVCWDKCISSTPGSKFSSSESACLSNCA 228
           M+ +A +S +MQ F+ QE+EKAM+NEMVAKLT+ CWDKCI+STPGSKFSSSES+CL+NC 
Sbjct: 1   MDTSALDSAEMQRFLNQEKEKAMVNEMVAKLTSACWDKCITSTPGSKFSSSESSCLTNCT 60

Query: 229 QRYMDMSLIIVKRFQSM 279
           QRYMDMSLII+KRFQSM
Sbjct: 61  QRYMDMSLIIMKRFQSM 77


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