BLASTX nr result

ID: Panax21_contig00031626 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031626
         (1704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270595.2| PREDICTED: DNA primase small subunit-like [V...   793   0.0  
emb|CBI34473.3| unnamed protein product [Vitis vinifera]              786   0.0  
ref|XP_004141619.1| PREDICTED: DNA primase small subunit-like [C...   735   0.0  
ref|XP_003519550.1| PREDICTED: DNA primase small subunit-like [G...   709   0.0  
ref|XP_002515859.1| DNA primase, putative [Ricinus communis] gi|...   706   0.0  

>ref|XP_002270595.2| PREDICTED: DNA primase small subunit-like [Vitis vinifera]
          Length = 457

 Score =  793 bits (2047), Expect = 0.0
 Identities = 379/456 (83%), Positives = 414/456 (90%), Gaps = 4/456 (0%)
 Frame = +3

Query: 147  EDKDTGRGDMLIDESE---SDLGRSNAITEGFNANYLKVYYGKLFPLADIFRWMSYGNDG 317
            E+ D+GR  M ID  E    +  R NA+ +GFNANYLKVYYGKLFP +D+F+WMSYGNDG
Sbjct: 2    EEVDSGRDAMEIDGCEPEGQEKMRENAVPDGFNANYLKVYYGKLFPHSDLFKWMSYGNDG 61

Query: 318  KHPACDQSFFGRREFSFTLEDDIYLRFQSFNSASEMENAIKEKCPFKIDIGPLYSVDPAK 497
            KHPACDQS+ GRREFSFTL DDIYLRFQSFNS  EMEN+IKEKCPFKIDIGP+YSVDP K
Sbjct: 62   KHPACDQSYIGRREFSFTLADDIYLRFQSFNSVHEMENSIKEKCPFKIDIGPVYSVDPTK 121

Query: 498  RHAYAQAGDNVFTPVERELVFDIDITDYDDVRYCCSGADVCLDCWPLMTVAIKVLDTALR 677
            RHAYAQ+GDNVFTPVERELVFDIDITDYDDVRYCCSGADVCLDCWPLMTVAIKV+DTALR
Sbjct: 122  RHAYAQSGDNVFTPVERELVFDIDITDYDDVRYCCSGADVCLDCWPLMTVAIKVIDTALR 181

Query: 678  DDFGFNHILWVYSGRRGVHCWVCDRKARRLNNEQRAAIADYFRVYKGNENSHKKVSLMGH 857
            DDFGFNHILWVYSGRRGVHCWVCD +ARRL+NEQRAAIADYFRVYKGNENS KKVSL+G 
Sbjct: 182  DDFGFNHILWVYSGRRGVHCWVCDGRARRLSNEQRAAIADYFRVYKGNENSQKKVSLVGP 241

Query: 858  TLHPYLARSYTEVLKDFFEGKLLCSQKLFSTEERYEKILDMIPDESITSELRGKWQDNRR 1037
             LHP+LARSYTEVLKDFFE KLL  QKLFSTEERYEKIL +IPDESITSELRGKWQ+NRR
Sbjct: 242  ALHPFLARSYTEVLKDFFEEKLLPGQKLFSTEERYEKILKIIPDESITSELRGKWQENRR 301

Query: 1038 SSTAKEDINIFRWEQLKHLLQSGKQKAQGIRRCVEEIVFSYAYPRLDMEVSKHMNHLLKA 1217
            SS +KEDIN  RWEQLKH+LQSGKQKAQG+RRCVEEIVFSY YPRLDMEVSKHMNHLLKA
Sbjct: 302  SSISKEDINAIRWEQLKHMLQSGKQKAQGLRRCVEEIVFSYTYPRLDMEVSKHMNHLLKA 361

Query: 1218 PFCVHPKTGRVCVPIDPNHCEEFDPTTVPTLSKLLREINM-GLRAQGDNEFDATSLGQSV 1394
            PFCVHPKTGRVCVPIDP  CEEFDPT+VPTLSKLL E+NM G RA  D+E++ TSLG+SV
Sbjct: 362  PFCVHPKTGRVCVPIDPKSCEEFDPTSVPTLSKLLEELNMGGFRADADDEWERTSLGKSV 421

Query: 1395 RYFRAAFLQPLLKSCKEEMESSYNAKNELSRNSLSW 1502
            ++FR +FLQPLLKSCKEE+ES+YNAK +LS+NSLSW
Sbjct: 422  KFFRLSFLQPLLKSCKEEIESAYNAKLQLSKNSLSW 457


>emb|CBI34473.3| unnamed protein product [Vitis vinifera]
          Length = 447

 Score =  786 bits (2030), Expect = 0.0
 Identities = 371/433 (85%), Positives = 403/433 (93%), Gaps = 1/433 (0%)
 Frame = +3

Query: 207  RSNAITEGFNANYLKVYYGKLFPLADIFRWMSYGNDGKHPACDQSFFGRREFSFTLEDDI 386
            R NA+ +GFNANYLKVYYGKLFP +D+F+WMSYGNDGKHPACDQS+ GRREFSFTL DDI
Sbjct: 15   RENAVPDGFNANYLKVYYGKLFPHSDLFKWMSYGNDGKHPACDQSYIGRREFSFTLADDI 74

Query: 387  YLRFQSFNSASEMENAIKEKCPFKIDIGPLYSVDPAKRHAYAQAGDNVFTPVERELVFDI 566
            YLRFQSFNS  EMEN+IKEKCPFKIDIGP+YSVDP KRHAYAQ+GDNVFTPVERELVFDI
Sbjct: 75   YLRFQSFNSVHEMENSIKEKCPFKIDIGPVYSVDPTKRHAYAQSGDNVFTPVERELVFDI 134

Query: 567  DITDYDDVRYCCSGADVCLDCWPLMTVAIKVLDTALRDDFGFNHILWVYSGRRGVHCWVC 746
            DITDYDDVRYCCSGADVCLDCWPLMTVAIKV+DTALRDDFGFNHILWVYSGRRGVHCWVC
Sbjct: 135  DITDYDDVRYCCSGADVCLDCWPLMTVAIKVIDTALRDDFGFNHILWVYSGRRGVHCWVC 194

Query: 747  DRKARRLNNEQRAAIADYFRVYKGNENSHKKVSLMGHTLHPYLARSYTEVLKDFFEGKLL 926
            D +ARRL+NEQRAAIADYFRVYKGNENS KKVSL+G  LHP+LARSYTEVLKDFFE KLL
Sbjct: 195  DGRARRLSNEQRAAIADYFRVYKGNENSQKKVSLVGPALHPFLARSYTEVLKDFFEEKLL 254

Query: 927  CSQKLFSTEERYEKILDMIPDESITSELRGKWQDNRRSSTAKEDINIFRWEQLKHLLQSG 1106
              QKLFSTEERYEKIL +IPDESITSELRGKWQ+NRRSS +KEDIN  RWEQLKH+LQSG
Sbjct: 255  PGQKLFSTEERYEKILKIIPDESITSELRGKWQENRRSSISKEDINAIRWEQLKHMLQSG 314

Query: 1107 KQKAQGIRRCVEEIVFSYAYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPNHCEEF 1286
            KQKAQG+RRCVEEIVFSY YPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDP  CEEF
Sbjct: 315  KQKAQGLRRCVEEIVFSYTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPKSCEEF 374

Query: 1287 DPTTVPTLSKLLREINM-GLRAQGDNEFDATSLGQSVRYFRAAFLQPLLKSCKEEMESSY 1463
            DPT+VPTLSKLL E+NM G RA  D+E++ TSLG+SV++FR +FLQPLLKSCKEE+ES+Y
Sbjct: 375  DPTSVPTLSKLLEELNMGGFRADADDEWERTSLGKSVKFFRLSFLQPLLKSCKEEIESAY 434

Query: 1464 NAKNELSRNSLSW 1502
            NAK +LS+NSLSW
Sbjct: 435  NAKLQLSKNSLSW 447


>ref|XP_004141619.1| PREDICTED: DNA primase small subunit-like [Cucumis sativus]
            gi|449517297|ref|XP_004165682.1| PREDICTED: DNA primase
            small subunit-like [Cucumis sativus]
          Length = 450

 Score =  735 bits (1897), Expect = 0.0
 Identities = 347/450 (77%), Positives = 396/450 (88%), Gaps = 1/450 (0%)
 Frame = +3

Query: 156  DTGRGDMLIDESESDLGRSNAITEGFNANYLKVYYGKLFPLADIFRWMSYGNDGKHPACD 335
            + G  DM+ID +E      N +++GF+ANYLK+YYGKLFP AD F+WMSYGNDGKHP  D
Sbjct: 7    ENGGSDMVIDGNEQK--PKNTVSDGFDANYLKIYYGKLFPYADFFKWMSYGNDGKHPGSD 64

Query: 336  QSFFGRREFSFTLEDDIYLRFQSFNSASEMENAIKEKCPFKIDIGPLYSVDPAKRHAYAQ 515
            QS+FGRREFSFTL++DIYLRFQSFN+ SEME +IKEKCPFKIDIGP+YSVDPAKRHAYA 
Sbjct: 65   QSYFGRREFSFTLDNDIYLRFQSFNNLSEMEISIKEKCPFKIDIGPVYSVDPAKRHAYAD 124

Query: 516  AGDNVFTPVERELVFDIDITDYDDVRYCCSGADVCLDCWPLMTVAIKVLDTALRDDFGFN 695
              DNVFTPVERELVFDID+TDYDDVRYCCSGADVCLDCWPLMT AIKV+ T LRDDFGFN
Sbjct: 125  --DNVFTPVERELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVIHTTLRDDFGFN 182

Query: 696  HILWVYSGRRGVHCWVCDRKARRLNNEQRAAIADYFRVYKGNENSHKKVSLMGHTLHPYL 875
            HILWV+SGRRGVHCWVCD KARRL+NEQRAAIA+YF +Y+GNENS KK+SL G  LHP+L
Sbjct: 183  HILWVFSGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFL 242

Query: 876  ARSYTEVLKDFFEGKLLCSQKLFSTEERYEKILDMIPDESITSELRGKWQDNRRSSTAKE 1055
             RSYTEVLKD FE +LLCSQK+FSTEERYEKILDMIPDESITS+LRG+WQDNRRSS  K 
Sbjct: 243  VRSYTEVLKDSFESQLLCSQKIFSTEERYEKILDMIPDESITSDLRGRWQDNRRSS--KN 300

Query: 1056 DINIFRWEQLKHLLQSGKQKAQGIRRCVEEIVFSYAYPRLDMEVSKHMNHLLKAPFCVHP 1235
            D+N  RWEQLK LLQSGK KAQG+RR VEEIVFS+ YPRLD EV+KHMNHLLKAPFCVHP
Sbjct: 301  DVNSLRWEQLKSLLQSGKHKAQGMRRHVEEIVFSFTYPRLDSEVTKHMNHLLKAPFCVHP 360

Query: 1236 KTGRVCVPIDPNHCEEFDPTTVPTLSKLLREINMG-LRAQGDNEFDATSLGQSVRYFRAA 1412
            KTGR+CVPIDP HC+EFDPTTVPT+++LL E+N   +    +N++D TSLG+S+R+FR+A
Sbjct: 361  KTGRICVPIDPEHCDEFDPTTVPTVAQLLEELNAADMEVDSENDWDRTSLGESIRFFRSA 420

Query: 1413 FLQPLLKSCKEEMESSYNAKNELSRNSLSW 1502
            FLQPLLKSCKEE+ESSYNAK + S+NSLSW
Sbjct: 421  FLQPLLKSCKEEIESSYNAKVQQSKNSLSW 450


>ref|XP_003519550.1| PREDICTED: DNA primase small subunit-like [Glycine max]
          Length = 434

 Score =  709 bits (1831), Expect = 0.0
 Identities = 333/426 (78%), Positives = 376/426 (88%), Gaps = 2/426 (0%)
 Frame = +3

Query: 231  FNANYLKVYYGKLFPLADIFRWMSYGNDGKHPACDQSFFGRREFSFTLEDDIYLRFQSFN 410
            FN N+LK+YYGKLFP AD+ RW+SYGNDGKHP CDQS+ GRREFSFTLE+DIYLRFQSF+
Sbjct: 9    FNLNHLKLYYGKLFPFADLVRWVSYGNDGKHPGCDQSYIGRREFSFTLENDIYLRFQSFH 68

Query: 411  SASEMENAIKEKCPFKIDIGPLYSVDPAKRHAYAQAGDN-VFTPVERELVFDIDITDYDD 587
            +A E+EN+IKEK P KIDIGP+Y+VDPAKR+AYAQ+GDN VF PVEREL+FDID++DYDD
Sbjct: 69   NALELENSIKEKTPVKIDIGPVYTVDPAKRNAYAQSGDNNVFAPVERELIFDIDMSDYDD 128

Query: 588  VRYCCSGADVCLDCWPLMTVAIKVLDTALRDDFGFNHILWVYSGRRGVHCWVCDRKARRL 767
            VRYCCSGADVCL CWPLMT+AIKV+DTALRDDFGF HILWVYSGRRGVHCWVCD KARRL
Sbjct: 129  VRYCCSGADVCLVCWPLMTIAIKVIDTALRDDFGFKHILWVYSGRRGVHCWVCDGKARRL 188

Query: 768  NNEQRAAIADYFRVYKGNENSHKKVSLMGHTLHPYLARSYTEVLKDFFEGKLLCSQKLFS 947
             NEQR AIADYFRVYKGNENSHKKVSLMG  LHP+LA SYT VLK++FE  LL  Q L +
Sbjct: 189  TNEQRGAIADYFRVYKGNENSHKKVSLMGAALHPFLATSYTNVLKNYFEKNLLTGQNLLA 248

Query: 948  TEERYEKILDMIPDESITSELRGKWQDNRRSSTAKEDINIFRWEQLKHLLQSGKQKAQGI 1127
            TEERYEKILDMIPDESI SELRG+WQD+RRSS+AKEDIN+ RWEQ K LLQSGK KAQG+
Sbjct: 249  TEERYEKILDMIPDESIASELRGRWQDSRRSSSAKEDINVVRWEQCKQLLQSGKHKAQGL 308

Query: 1128 RRCVEEIVFSYAYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPNHCEEFDPTTVPT 1307
            RRC+EEIVF + YPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDP  CEEFDPTTVPT
Sbjct: 309  RRCIEEIVFCFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPKRCEEFDPTTVPT 368

Query: 1308 LSKLLREINM-GLRAQGDNEFDATSLGQSVRYFRAAFLQPLLKSCKEEMESSYNAKNELS 1484
            LS+L+ E+N  G RA  D E + TSLG ++  FR++FLQPLLK+CKEE+E+SYN K + S
Sbjct: 369  LSQLIEELNYEGSRADADGESNRTSLGNAITLFRSSFLQPLLKACKEEIENSYNLKLQQS 428

Query: 1485 RNSLSW 1502
            +NSL W
Sbjct: 429  KNSLGW 434


>ref|XP_002515859.1| DNA primase, putative [Ricinus communis] gi|223545014|gb|EEF46528.1|
            DNA primase, putative [Ricinus communis]
          Length = 515

 Score =  706 bits (1821), Expect(2) = 0.0
 Identities = 327/431 (75%), Positives = 385/431 (89%), Gaps = 1/431 (0%)
 Frame = +3

Query: 156  DTGRGDMLIDESESDLGRSNAITEGFNANYLKVYYGKLFPLADIFRWMSYGNDGKHPACD 335
            D GR DMLID        +NA++  FN NYLK+YYGKLFP A+IF+WM YGNDGKHPACD
Sbjct: 5    DNGRDDMLID--------ANAVSNEFNPNYLKLYYGKLFPHAEIFKWMCYGNDGKHPACD 56

Query: 336  QSFFGRREFSFTLEDDIYLRFQSFNSASEMENAIKEKCPFKIDIGPLYSVDPAKRHAYAQ 515
            +S+FGRREFSFTL++DIYLRFQSFN+ S+++ +IK+KCPFKIDIGP+Y+VDPAKRHAY+Q
Sbjct: 57   KSYFGRREFSFTLDNDIYLRFQSFNNESQLKTSIKDKCPFKIDIGPVYTVDPAKRHAYSQ 116

Query: 516  AGDNVFTPVERELVFDIDITDYDDVRYCCSGADVCLDCWPLMTVAIKVLDTALRDDFGFN 695
            +GDNVFTPVEREL+FDID++DYD+VRYCCSGADVCLDCWPLMT+AIKV+++ALRDDFGFN
Sbjct: 117  SGDNVFTPVERELIFDIDMSDYDNVRYCCSGADVCLDCWPLMTIAIKVINSALRDDFGFN 176

Query: 696  HILWVYSGRRGVHCWVCDRKARRLNNEQRAAIADYFRVYKGNENSHKKVSLMGHTLHPYL 875
            HILWVYSGRRGVHCWVCD KARRL NEQRAAI DY RVYKGNENS+K VSL G  LHP+L
Sbjct: 177  HILWVYSGRRGVHCWVCDGKARRLTNEQRAAIVDYLRVYKGNENSNKMVSLTG-PLHPFL 235

Query: 876  ARSYTEVLKDFFEGKLLCSQKLFSTEERYEKILDMIPDESITSELRGKWQDNRRSSTAKE 1055
             RSY EVLKDFFE KLL SQ++FSTEERYEKIL+MIPDES+TSELRGKWQ+ +++S++KE
Sbjct: 236  VRSYAEVLKDFFETKLLSSQEIFSTEERYEKILEMIPDESVTSELRGKWQNTKQTSSSKE 295

Query: 1056 DINIFRWEQLKHLLQSGKQKAQGIRRCVEEIVFSYAYPRLDMEVSKHMNHLLKAPFCVHP 1235
             +N+ RWEQLK  LQSG +KA G+R+CVEEIVFS+ YPRLD+EVSKHMNHLLKAPFC+HP
Sbjct: 296  GVNLVRWEQLKRTLQSGTKKAPGLRKCVEEIVFSFTYPRLDVEVSKHMNHLLKAPFCIHP 355

Query: 1236 KTGRVCVPIDPNHCEEFDPTTVPTLSKLLREINM-GLRAQGDNEFDATSLGQSVRYFRAA 1412
            KTGRVCVPIDP HC+EFDPT VPTLS+LL+E+NM G RA  DN+ D TSLG+S+ +FR++
Sbjct: 356  KTGRVCVPIDPKHCDEFDPTAVPTLSQLLKELNMGGPRASDDNDVDRTSLGKSISFFRSS 415

Query: 1413 FLQPLLKSCKE 1445
            FLQPLLKSCKE
Sbjct: 416  FLQPLLKSCKE 426



 Score = 25.0 bits (53), Expect(2) = 0.0
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +1

Query: 1441 RRRWKAPTMQKMSCQGTL*AGSTF 1512
            R+RWK P MQ  S Q     G  F
Sbjct: 458  RKRWKVPIMQNCSTQRIPSTGDAF 481


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