BLASTX nr result

ID: Panax21_contig00030109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00030109
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269610.2| PREDICTED: cellulose synthase A catalytic su...   343   2e-92
emb|CBI30713.3| unnamed protein product [Vitis vinifera]              323   2e-86
ref|XP_003532762.1| PREDICTED: cellulose synthase A catalytic su...   323   2e-86
ref|XP_004150226.1| PREDICTED: LOW QUALITY PROTEIN: cellulose sy...   320   1e-85
gb|AFV94635.1| WD40-containing protein [Malus x domestica]            315   4e-84

>ref|XP_002269610.2| PREDICTED: cellulose synthase A catalytic subunit 8 [UDP-forming]
           [Vitis vinifera]
          Length = 1360

 Score =  343 bits (881), Expect = 2e-92
 Identities = 165/237 (69%), Positives = 197/237 (83%), Gaps = 1/237 (0%)
 Frame = +3

Query: 3   DIFYVSSGNEVKSFDVHLATSWKPLENYNYNKEEINQIVSSSKSSFLAAADDGGDVKIID 182
           DI YVSSG+EVK FDVHLA +WKPLE+YNYNKEEINQI  +SKSSFLA+ADD GDVKIID
Sbjct: 68  DIIYVSSGSEVKCFDVHLADAWKPLESYNYNKEEINQIACNSKSSFLASADDDGDVKIID 127

Query: 183 IRQQCLYKTLRAGHESICSTVQFLPWRPWEVITGGLDSKLIMWDFSKGRPNKILDFSILD 362
           IRQ+CL+KTLR+GH SICS+V+FLPWRPWEVITGGLDSKL+MWDFSKGRP KI+DF + D
Sbjct: 128 IRQKCLFKTLRSGHTSICSSVKFLPWRPWEVITGGLDSKLVMWDFSKGRPYKIVDFGMPD 187

Query: 363 VETRGTAEQCFNPAFVHAIAVPEVDMIDKLDKICVVGRGDGVISVIDIESELANTRSRNS 542
           +E   +A QC NPAFVHAIAVPEVDM++K  KICVV RGDGV+ VI+IESELA  +S+ S
Sbjct: 188 MENSSSAGQCLNPAFVHAIAVPEVDMLEKSGKICVVARGDGVVDVINIESELAAAQSKTS 247

Query: 543 SKPQKGNRXXXXXXXXXXXXXXQ-DQNGKKNLNLDYSFGGHTAAVSCVAFSMFGEKG 710
           SKPQ+G++                +QNG++ L+LDYS GGHTA+VSCVAF++FGE+G
Sbjct: 248 SKPQRGSKSRSKSKGSVSTVAETLNQNGRRRLHLDYSLGGHTASVSCVAFALFGERG 304


>emb|CBI30713.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  323 bits (829), Expect = 2e-86
 Identities = 158/236 (66%), Positives = 187/236 (79%)
 Frame = +3

Query: 3   DIFYVSSGNEVKSFDVHLATSWKPLENYNYNKEEINQIVSSSKSSFLAAADDGGDVKIID 182
           DI YVSSG+EVK FDVHLA +WKPLE+YNYNKEEINQI  +SKSSFLA+ADD GDVKIID
Sbjct: 68  DIIYVSSGSEVKCFDVHLADAWKPLESYNYNKEEINQIACNSKSSFLASADDDGDVKIID 127

Query: 183 IRQQCLYKTLRAGHESICSTVQFLPWRPWEVITGGLDSKLIMWDFSKGRPNKILDFSILD 362
           IRQ+CL+KTLR+GH SICS+V+FLPWRPWEVITGGLDSKL+MWDFSKGRP KI+DF + D
Sbjct: 128 IRQKCLFKTLRSGHTSICSSVKFLPWRPWEVITGGLDSKLVMWDFSKGRPYKIVDFGMPD 187

Query: 363 VETRGTAEQCFNPAFVHAIAVPEVDMIDKLDKICVVGRGDGVISVIDIESELANTRSRNS 542
           +E   +A QC NPAFVHAIAVPEVDM++K  KICVV RGDGV+ VI+IESELA       
Sbjct: 188 MENSSSAGQCLNPAFVHAIAVPEVDMLEKSGKICVVARGDGVVDVINIESELAAAHVSTV 247

Query: 543 SKPQKGNRXXXXXXXXXXXXXXQDQNGKKNLNLDYSFGGHTAAVSCVAFSMFGEKG 710
           ++                     +QNG++ L+LDYS GGHTA+VSCVAF++FGE+G
Sbjct: 248 AE-------------------TLNQNGRRRLHLDYSLGGHTASVSCVAFALFGERG 284


>ref|XP_003532762.1| PREDICTED: cellulose synthase A catalytic subunit 8
           [UDP-forming]-like [Glycine max]
          Length = 1383

 Score =  323 bits (828), Expect = 2e-86
 Identities = 159/237 (67%), Positives = 191/237 (80%), Gaps = 1/237 (0%)
 Frame = +3

Query: 3   DIFYVSSGNEVKSFDVHLATS-WKPLENYNYNKEEINQIVSSSKSSFLAAADDGGDVKII 179
           D+ YVSSG E+K FDV LA + WKPLENYNYNKEEIN++V +SKSSF+AAADD G+VKII
Sbjct: 78  DMIYVSSGKEIKCFDVRLAAAQWKPLENYNYNKEEINKVVCNSKSSFVAAADDNGEVKII 137

Query: 180 DIRQQCLYKTLRAGHESICSTVQFLPWRPWEVITGGLDSKLIMWDFSKGRPNKILDFSIL 359
           DIRQQCLYKTLRAGH SICSTV+FLPWR WEVI+GGLDS L++WDFSKGRP K++DF+  
Sbjct: 138 DIRQQCLYKTLRAGHTSICSTVEFLPWRSWEVISGGLDSMLMLWDFSKGRPYKVVDFATF 197

Query: 360 DVETRGTAEQCFNPAFVHAIAVPEVDMIDKLDKICVVGRGDGVISVIDIESELANTRSRN 539
           DV + G A +C NPAFVHAIAVPEVDM+DKLDKIC   RGDG I VI+IE+E+A T+S++
Sbjct: 198 DVSS-GIAGRCVNPAFVHAIAVPEVDMLDKLDKICAAARGDGAIDVINIETEMAATKSKS 256

Query: 540 SSKPQKGNRXXXXXXXXXXXXXXQDQNGKKNLNLDYSFGGHTAAVSCVAFSMFGEKG 710
           SS  +KG+                DQNGKK L+L+Y+ GGHTAAVS +AFS+FGE+G
Sbjct: 257 SSNSRKGSH-SRSKDGSSSSNTDADQNGKKRLHLNYTLGGHTAAVSSLAFSLFGERG 312


>ref|XP_004150226.1| PREDICTED: LOW QUALITY PROTEIN: cellulose synthase A catalytic
           subunit 8 [UDP-forming]-like [Cucumis sativus]
          Length = 1362

 Score =  320 bits (821), Expect = 1e-85
 Identities = 154/236 (65%), Positives = 184/236 (77%)
 Frame = +3

Query: 3   DIFYVSSGNEVKSFDVHLATSWKPLENYNYNKEEINQIVSSSKSSFLAAADDGGDVKIID 182
           D+ Y+SSG E+KSFDVH AT+ KPL +Y+YNKEEINQ+  S K+SFLAAADDGGDVKIID
Sbjct: 70  DVIYISSGKEIKSFDVHQATASKPLGSYSYNKEEINQVSCSPKASFLAAADDGGDVKIID 129

Query: 183 IRQQCLYKTLRAGHESICSTVQFLPWRPWEVITGGLDSKLIMWDFSKGRPNKILDFSILD 362
           +   CLYKTLR+GH SICS+VQFLPWRPWEVITGGLDSKLIMWDFS+GRP ++LDF I D
Sbjct: 130 VHNNCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDSKLIMWDFSRGRPIQVLDFDIPD 189

Query: 363 VETRGTAEQCFNPAFVHAIAVPEVDMIDKLDKICVVGRGDGVISVIDIESELANTRSRNS 542
                + EQCFNPAF+HAIAVPEV+M+D+L +ICVV RGDG++ VIDIESE + T S+  
Sbjct: 190 NHPSSSTEQCFNPAFIHAIAVPEVNMLDRLGQICVVARGDGIVHVIDIESEKSKTSSKTG 249

Query: 543 SKPQKGNRXXXXXXXXXXXXXXQDQNGKKNLNLDYSFGGHTAAVSCVAFSMFGEKG 710
            K Q  ++              Q+Q G+K L LDY+ GGH+AAVSCVAFS FGEKG
Sbjct: 250 KKVQSRSK----GVTAACDMNNQEQTGRKKLYLDYTVGGHSAAVSCVAFSQFGEKG 301


>gb|AFV94635.1| WD40-containing protein [Malus x domestica]
          Length = 371

 Score =  315 bits (808), Expect = 4e-84
 Identities = 152/238 (63%), Positives = 186/238 (78%), Gaps = 2/238 (0%)
 Frame = +3

Query: 3   DIFYVSSGNEVKSFDVHLATS--WKPLENYNYNKEEINQIVSSSKSSFLAAADDGGDVKI 176
           ++ YV+SG +VKSFDV L +S  WKPLE+++YNKEEINQI  S KSS LAA DDGG++KI
Sbjct: 70  NMIYVASGKQVKSFDVRLGSSCSWKPLESFDYNKEEINQIACSPKSSLLAAPDDGGEIKI 129

Query: 177 IDIRQQCLYKTLRAGHESICSTVQFLPWRPWEVITGGLDSKLIMWDFSKGRPNKILDFSI 356
           IDIRQ+ +YKTLR GH SICST QFLPW+PWEVITGGLDSKL+MWDFSKGRPNKI++  +
Sbjct: 130 IDIRQKRIYKTLRDGHTSICSTAQFLPWKPWEVITGGLDSKLVMWDFSKGRPNKIMNVDL 189

Query: 357 LDVETRGTAEQCFNPAFVHAIAVPEVDMIDKLDKICVVGRGDGVISVIDIESELANTRSR 536
            D       EQCFNPAFVH+IAVPE+DM+DK DK+C+V RGDG + VI+IE+ELA  RS+
Sbjct: 190 PDANNGKAKEQCFNPAFVHSIAVPEMDMLDKSDKVCIVARGDGAVDVINIEAELAPLRSQ 249

Query: 537 NSSKPQKGNRXXXXXXXXXXXXXXQDQNGKKNLNLDYSFGGHTAAVSCVAFSMFGEKG 710
            S KPQKG++               D+ G+K L+LDY  GGHTAAVSCVAFS+FG++G
Sbjct: 250 GSKKPQKGSQ----SRSKGTDLENPDREGRKRLHLDYLSGGHTAAVSCVAFSLFGDRG 303


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