BLASTX nr result

ID: Panax21_contig00030038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00030038
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]   109   2e-25
emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]   110   6e-25
emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]   112   3e-23
ref|XP_002317615.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
emb|CAN69190.1| hypothetical protein VITISV_001578 [Vitis vinifera]   110   1e-22

>emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]
          Length = 970

 Score =  109 bits (272), Expect(2) = 2e-25
 Identities = 55/122 (45%), Positives = 76/122 (62%)
 Frame = +3

Query: 3   LISKKLTGADNFAPWKRSMQIALSARNKFVLVNGSFPKPVEDFPLFAQWERVNDMVITWI 182
           L+S  LTGA N+  W R+M +AL+A+NK   ++GS P P  D  LF  W R N MVI+WI
Sbjct: 40  LVSHHLTGA-NYNTWSRAMVMALTAKNKISFIDGSIPCPESDDLLFGTWIRCNSMVISWI 98

Query: 183 LNTVNDDISDGMNFVNSAYEVWNELSERFSGINGHRIYQILKDTHNFEQGDKSVELYYPS 362
           LN+V+ DI+D + + ++A  +WN+L +RF   NG RI+QI K      QG   V  YY  
Sbjct: 99  LNSVHKDIADSLLYFDTAVGIWNDLRDRFCQSNGPRIFQIKKHLIALSQGSLDVSTYYTR 158

Query: 363 LR 368
           L+
Sbjct: 159 LK 160



 Score = 31.6 bits (70), Expect(2) = 2e-25
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +2

Query: 347 TLLSKLKNLWDEYAVLEPTVSCVCGAHKVQEERNQR 454
           T  ++LK LWDE    +P   C CG  K   E  Q+
Sbjct: 154 TYYTRLKILWDELKGFQPLPECACGTMKTWMEFQQQ 189


>emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]
          Length = 1131

 Score =  110 bits (275), Expect(2) = 6e-25
 Identities = 52/124 (41%), Positives = 78/124 (62%)
 Frame = +3

Query: 3   LISKKLTGADNFAPWKRSMQIALSARNKFVLVNGSFPKPVEDFPLFAQWERVNDMVITWI 182
           L+SK L G DN++ W R+M+I+LSA++K   V GS   P      F  W+R NDMVI+W+
Sbjct: 30  LVSKVLEG-DNYSTWSRAMRISLSAKDKIGFVTGSIKPPSSTDDSFPSWQRCNDMVISWL 88

Query: 183 LNTVNDDISDGMNFVNSAYEVWNELSERFSGINGHRIYQILKDTHNFEQGDKSVELYYPS 362
           LN+++ DI+  + +  +  E+W +L ERFS  N  RIYQI +D     QG +S+ +YY  
Sbjct: 89  LNSIHPDIASSVIYAETTSEIWADLRERFSQGNDSRIYQIKRDIVEHRQGQQSISVYYTK 148

Query: 363 LRTY 374
           L+ +
Sbjct: 149 LKAF 152



 Score = 28.5 bits (62), Expect(2) = 6e-25
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 356 SKLKNLWDEYAVLEPTVSCVCGAHKVQEERNQR 454
           +KLK  WDE +     +SC CG  +  +E +++
Sbjct: 147 TKLKAFWDELSSYHEVLSCSCGGLEKLKEMDEK 179


>emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]
          Length = 334

 Score =  112 bits (280), Expect = 3e-23
 Identities = 54/135 (40%), Positives = 84/135 (62%)
 Frame = +3

Query: 3   LISKKLTGADNFAPWKRSMQIALSARNKFVLVNGSFPKPVEDFPLFAQWERVNDMVITWI 182
           L+SK L G DN++ W R+M+I+LSA++K   V GS   P      F  W+R NDMVI+W+
Sbjct: 33  LVSKVLEG-DNYSTWSRAMRISLSAKDKIGFVTGSIKPPSSTDDSFPSWQRCNDMVISWL 91

Query: 183 LNTVNDDISDGMNFVNSAYEVWNELSERFSGINGHRIYQILKDTHNFEQGDKSVELYYPS 362
           LN+++ DI+  + +  +A E+W +L ERFS  N  RIYQI +D     QG +S+ +YY  
Sbjct: 92  LNSIHPDIASSVIYAETASEIWADLRERFSQGNDSRIYQIKRDIVEHRQGQQSISVYYTK 151

Query: 363 LRTYGMSMQFWNLLL 407
           L+ +   +  ++ +L
Sbjct: 152 LKAFXDELSSYHEVL 166


>ref|XP_002317615.1| predicted protein [Populus trichocarpa] gi|222860680|gb|EEE98227.1|
           predicted protein [Populus trichocarpa]
          Length = 278

 Score =  112 bits (279), Expect = 4e-23
 Identities = 57/133 (42%), Positives = 83/133 (62%), Gaps = 1/133 (0%)
 Frame = +3

Query: 3   LISKKLTGADNFAPWKRSMQIALSARNKFVLVNGSFPKPV-EDFPLFAQWERVNDMVITW 179
           L+++ LT  +N+  W RSM+ AL ARNK   ++G+  +P  E+ PLF  WER NDMV++W
Sbjct: 44  LVTELLT-TENYITWSRSMRRALRARNKLGFISGNIVRPTNEEDPLFEMWERCNDMVVSW 102

Query: 180 ILNTVNDDISDGMNFVNSAYEVWNELSERFSGINGHRIYQILKDTHNFEQGDKSVELYYP 359
           I N V+ DI   + FV+ A  VW EL++RF+  NGHRI+Q+ +D     Q   SV  Y+ 
Sbjct: 103 IQNAVSTDIKHTLVFVDDAQMVWTELNDRFTQQNGHRIFQLRRDLATLRQDKDSVSSYFG 162

Query: 360 SLRTYGMSMQFWN 398
           +L+T    M  +N
Sbjct: 163 NLKTLWDEMIVYN 175


>emb|CAN69190.1| hypothetical protein VITISV_001578 [Vitis vinifera]
          Length = 1323

 Score =  110 bits (275), Expect = 1e-22
 Identities = 56/124 (45%), Positives = 80/124 (64%), Gaps = 2/124 (1%)
 Frame = +3

Query: 3   LISKKLTGADNFAPWKRSMQIALSARNKFVLVNGSFPKPVEDFPL--FAQWERVNDMVIT 176
           LISK L G DN++ WKR+M +AL+++NK   VNGS   P E+     +A W R NDMV +
Sbjct: 31  LISKSLNG-DNYSAWKRAMILALNSKNKLXFVNGSIKAPSEEIDPEGYATWSRCNDMVHS 89

Query: 177 WILNTVNDDISDGMNFVNSAYEVWNELSERFSGINGHRIYQILKDTHNFEQGDKSVELYY 356
           WI+NT+N +I+D + + ++A+EVW +L ERFS  N  RI++I +D     Q   SV  YY
Sbjct: 90  WIVNTLNPEIADSVIYYSTAHEVWEDLCERFSQSNAPRIFEIQRDIACLRQEQLSVSAYY 149

Query: 357 PSLR 368
             L+
Sbjct: 150 TKLK 153


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