BLASTX nr result

ID: Panax21_contig00029991 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029991
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26058.3| unnamed protein product [Vitis vinifera]               59   4e-07
ref|XP_002516922.1| GTP binding protein, putative [Ricinus commu...    56   4e-06

>emb|CBI26058.3| unnamed protein product [Vitis vinifera]
          Length = 1291

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 64/191 (33%), Positives = 79/191 (41%), Gaps = 12/191 (6%)
 Frame = -3

Query: 541 PIRAPLT------IXXXXXXXXXXXNGLESEGYLSGEDEFG--TASERPFVAHPDDETPE 386
           PIRAPL+      I           +G ES   +S EDEF   TASERPFV  PD+ET  
Sbjct: 42  PIRAPLSLDSDFDIYVRSDDNVISTSGSESGRNMSEEDEFEFETASERPFVGFPDEETSV 101

Query: 385 ETSGDEEFVVSRPFASDPDEEIIEETSNVEKFIVSRPFVSNPDRIVIENRVSSRPVVANV 206
            +   EE+V++ PF + PDEE +E                              P+    
Sbjct: 102 GSDDVEEYVLASPFLAVPDEETLE-----------------------------APLQDEQ 132

Query: 205 NEETLVTPPEKEGEYDLGVETKVMDNKFLSLSKPGMPPIAPLSRDSDEDSVGSMVE---- 38
           N+          G Y L     V+D+   S SK  M P A LS D D D+     E    
Sbjct: 133 NDAI--------GHYALTFVPVVVDD---SNSKYSM-PTARLSMDDDCDNGSGEEELSEV 180

Query: 37  EDDGFSGVVRI 5
           ED GFSG  RI
Sbjct: 181 EDGGFSGADRI 191


>ref|XP_002516922.1| GTP binding protein, putative [Ricinus communis]
           gi|223544010|gb|EEF45536.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 1381

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 61/213 (28%), Positives = 89/213 (41%), Gaps = 25/213 (11%)
 Frame = -3

Query: 565 SSSGSSSFPIRAPLTIXXXXXXXXXXXN-------------GLESEGYLSGEDEFGTASE 425
           S++ + SFPIRAP+T+           +             G ESE Y+SGE EF +ASE
Sbjct: 10  STTRAGSFPIRAPVTLDDSSDFESDGHDKTDNSDTTSIIYNGSESEEYVSGE-EFESASE 68

Query: 424 RPFVAHPDDETPEETSGDEEFVVSRPFASDPDEEIIEETSNVEKFIVSRPFVSNPDRIVI 245
           + F+A  D+E  E+                       E +N                   
Sbjct: 69  KLFIADTDEENHEQIG------------------FFYEVTNF------------------ 92

Query: 244 ENRVSSRPVVANVNEETL-VTPPEKEG----EYDLGVETKVMDNKFLSLSKPGMPPIAPL 80
                 RP+VAN +EE+L ++  ++E     EYD  V++ +        S P + PIA L
Sbjct: 93  ------RPLVANADEESLGISVDDEESGVTEEYDPIVDSDIP-------SSPKVMPIAQL 139

Query: 79  SRDSDEDSVGSMVE-------EDDGFSGVVRIP 2
           S D DE      VE       ED+ FSG+V++P
Sbjct: 140 SMDDDEFEELMCVEGMVRSELEDNSFSGIVKVP 172


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