BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029933
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [...   158   5e-37
ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-lik...   157   6e-37
emb|CBI26421.3| unnamed protein product [Vitis vinifera]              157   6e-37
dbj|BAA88922.1| sigma factor [Nicotiana tabacum]                      156   1e-36
ref|XP_002319237.1| predicted protein [Populus trichocarpa] gi|2...   153   1e-35

>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 508

 Score =  158 bits (399), Expect = 5e-37
 Identities = 77/94 (81%), Positives = 81/94 (86%)
 Frame = +3

Query: 3   YIADNRLENNPWHGVDEWALKDEVNRLMNTTLXXXXXXXXXLYYGLDNECLTWEDISKRI 182
           YIADN LENNPWHGVD+WALKDEVN+L+N TL         LYYGLDNE LTWEDISKRI
Sbjct: 415 YIADNCLENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTWEDISKRI 474

Query: 183 GLSRERVRQVGLVALEKLKHGARKKRLEAMLVKH 284
           GLSRERVRQVGLVALEKLKH ARKK+LEAMLVKH
Sbjct: 475 GLSRERVRQVGLVALEKLKHAARKKKLEAMLVKH 508


>ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-like isoform 2 [Vitis
           vinifera]
          Length = 497

 Score =  157 bits (398), Expect = 6e-37
 Identities = 77/94 (81%), Positives = 82/94 (87%)
 Frame = +3

Query: 3   YIADNRLENNPWHGVDEWALKDEVNRLMNTTLXXXXXXXXXLYYGLDNECLTWEDISKRI 182
           YIAD RLENNPWHGVDEWALKDEVN+L+NTTL         LYYGLDNECLTWEDISKRI
Sbjct: 404 YIADVRLENNPWHGVDEWALKDEVNKLINTTLGERERDIIRLYYGLDNECLTWEDISKRI 463

Query: 183 GLSRERVRQVGLVALEKLKHGARKKRLEAMLVKH 284
           GLSRERVRQVGLVALEKLK+ ARK R+EAMLVK+
Sbjct: 464 GLSRERVRQVGLVALEKLKNAARKGRMEAMLVKY 497


>emb|CBI26421.3| unnamed protein product [Vitis vinifera]
          Length = 555

 Score =  157 bits (398), Expect = 6e-37
 Identities = 77/94 (81%), Positives = 82/94 (87%)
 Frame = +3

Query: 3   YIADNRLENNPWHGVDEWALKDEVNRLMNTTLXXXXXXXXXLYYGLDNECLTWEDISKRI 182
           YIAD RLENNPWHGVDEWALKDEVN+L+NTTL         LYYGLDNECLTWEDISKRI
Sbjct: 462 YIADVRLENNPWHGVDEWALKDEVNKLINTTLGERERDIIRLYYGLDNECLTWEDISKRI 521

Query: 183 GLSRERVRQVGLVALEKLKHGARKKRLEAMLVKH 284
           GLSRERVRQVGLVALEKLK+ ARK R+EAMLVK+
Sbjct: 522 GLSRERVRQVGLVALEKLKNAARKGRMEAMLVKY 555


>dbj|BAA88922.1| sigma factor [Nicotiana tabacum]
          Length = 502

 Score =  156 bits (395), Expect = 1e-36
 Identities = 75/94 (79%), Positives = 81/94 (86%)
 Frame = +3

Query: 3   YIADNRLENNPWHGVDEWALKDEVNRLMNTTLXXXXXXXXXLYYGLDNECLTWEDISKRI 182
           YIADNRLEN PWHGVDEW LKDEVN L+++TL         LYYGLDNECLTWEDIS+RI
Sbjct: 409 YIADNRLENIPWHGVDEWMLKDEVNNLISSTLREREREIVRLYYGLDNECLTWEDISRRI 468

Query: 183 GLSRERVRQVGLVALEKLKHGARKKRLEAMLVKH 284
           GLSRERVRQVGLVALEKLKH ARK+RL+AMLVKH
Sbjct: 469 GLSRERVRQVGLVALEKLKHAARKRRLDAMLVKH 502


>ref|XP_002319237.1| predicted protein [Populus trichocarpa] gi|222857613|gb|EEE95160.1|
           predicted protein [Populus trichocarpa]
          Length = 499

 Score =  153 bits (387), Expect = 1e-35
 Identities = 73/94 (77%), Positives = 81/94 (86%)
 Frame = +3

Query: 3   YIADNRLENNPWHGVDEWALKDEVNRLMNTTLXXXXXXXXXLYYGLDNECLTWEDISKRI 182
           YIADNRLENNPWHGVDEWALK+EVN+L+++ L         LY+GLD ECLTWEDISKR+
Sbjct: 406 YIADNRLENNPWHGVDEWALKEEVNKLIDSALQEREREIIRLYHGLDKECLTWEDISKRM 465

Query: 183 GLSRERVRQVGLVALEKLKHGARKKRLEAMLVKH 284
           GLSRERVRQVGLVALEKLKH ARK +LEAMLVKH
Sbjct: 466 GLSRERVRQVGLVALEKLKHAARKGKLEAMLVKH 499