BLASTX nr result

ID: Panax21_contig00029895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029895
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent hel...   152   3e-35
ref|XP_002310362.1| chromatin remodeling complex subunit [Populu...   141   6e-32
ref|XP_002513133.1| DNA repair helicase rad5,16, putative [Ricin...   140   1e-31
emb|CBI35366.3| unnamed protein product [Vitis vinifera]              138   4e-31
ref|XP_003555190.1| PREDICTED: ATP-dependent helicase ULS1-like ...   125   5e-27

>ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
            [Vitis vinifera]
          Length = 1013

 Score =  152 bits (384), Expect = 3e-35
 Identities = 75/125 (60%), Positives = 86/125 (68%)
 Frame = +1

Query: 1    CNDPPEDAIVTMCGHVYCYQCVSEYLRGDENTCPSPDCRGQLGPDAVFSKSTLRRCLYXX 180
            CNDPPEDA+VTMCGHV+CYQCVSEYL GD+NTCP+ +C+ QLG D VFSK+TL  C+   
Sbjct: 734  CNDPPEDAVVTMCGHVFCYQCVSEYLTGDDNTCPALECKEQLGADVVFSKATLISCI--S 791

Query: 181  XXXXXXXXNPSSETNKSIVLQNEYSSSKIKAVLEILQSHCKSNSPGSQVHGMVRLNGVSS 360
                    N S    KSI LQNEYSSSKI+A LEILQSHCK  SP S  H  +  NG  S
Sbjct: 792  DELDGSLSNSSQSAEKSINLQNEYSSSKIRAALEILQSHCKLTSPDSDPHSSMGCNGSYS 851

Query: 361  STGKE 375
            +   E
Sbjct: 852  NPETE 856


>ref|XP_002310362.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222853265|gb|EEE90812.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 923

 Score =  141 bits (355), Expect = 6e-32
 Identities = 67/111 (60%), Positives = 85/111 (76%)
 Frame = +1

Query: 1   CNDPPEDAIVTMCGHVYCYQCVSEYLRGDENTCPSPDCRGQLGPDAVFSKSTLRRCLYXX 180
           C DPPED++VTMCGHV+C QCVSEYL GD+NTCP+ DC+ QLG D VFS++TLRR +   
Sbjct: 642 CRDPPEDSVVTMCGHVFCNQCVSEYLTGDDNTCPASDCKEQLGSDVVFSEATLRRRI--- 698

Query: 181 XXXXXXXXNPSSETNKSIVLQNEYSSSKIKAVLEILQSHCKSNSPGSQVHG 333
                   + S   +KSIVLQ+EY+SSKIKAVLE++QSHCK+ SP S+ +G
Sbjct: 699 SDTFDASSSHSKFDDKSIVLQHEYNSSKIKAVLEVIQSHCKAGSPISEFNG 749


>ref|XP_002513133.1| DNA repair helicase rad5,16, putative [Ricinus communis]
            gi|223548144|gb|EEF49636.1| DNA repair helicase rad5,16,
            putative [Ricinus communis]
          Length = 993

 Score =  140 bits (353), Expect = 1e-31
 Identities = 67/121 (55%), Positives = 85/121 (70%)
 Frame = +1

Query: 1    CNDPPEDAIVTMCGHVYCYQCVSEYLRGDENTCPSPDCRGQLGPDAVFSKSTLRRCLYXX 180
            CNDPPED +VTMC HV+CYQCVSEYL GD+N CP+  C+  LGPD VFS++TLR C+   
Sbjct: 712  CNDPPEDPVVTMCDHVFCYQCVSEYLTGDDNMCPARGCKELLGPDVVFSEATLRSCM--S 769

Query: 181  XXXXXXXXNPSSETNKSIVLQNEYSSSKIKAVLEILQSHCKSNSPGSQVHGMVRLNGVSS 360
                     P  +  +++VLQNEYSSSKI+AVLEILQSHC+  SP  ++ G    NG S+
Sbjct: 770  DNLDAGPKRPEFD-ERAMVLQNEYSSSKIRAVLEILQSHCQVKSPSPELGGATEYNGSST 828

Query: 361  S 363
            +
Sbjct: 829  A 829


>emb|CBI35366.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score =  138 bits (348), Expect = 4e-31
 Identities = 67/103 (65%), Positives = 76/103 (73%)
 Frame = +1

Query: 1   CNDPPEDAIVTMCGHVYCYQCVSEYLRGDENTCPSPDCRGQLGPDAVFSKSTLRRCLYXX 180
           CNDPPEDA+VTMCGHV+CYQCVSEYL GD+NTCP+ +C+ QLG D VFSK+TL  C+   
Sbjct: 646 CNDPPEDAVVTMCGHVFCYQCVSEYLTGDDNTCPALECKEQLGADVVFSKATLISCI--S 703

Query: 181 XXXXXXXXNPSSETNKSIVLQNEYSSSKIKAVLEILQSHCKSN 309
                   N S    KSI LQNEYSSSKI+A LEILQSH  SN
Sbjct: 704 DELDGSLSNSSQSAEKSINLQNEYSSSKIRAALEILQSHSYSN 746


>ref|XP_003555190.1| PREDICTED: ATP-dependent helicase ULS1-like [Glycine max]
          Length = 1027

 Score =  125 bits (313), Expect = 5e-27
 Identities = 58/101 (57%), Positives = 74/101 (73%)
 Frame = +1

Query: 1    CNDPPEDAIVTMCGHVYCYQCVSEYLRGDENTCPSPDCRGQLGPDAVFSKSTLRRCLYXX 180
            CNDPPE+ ++TMCGHV+CYQCVSEYL GD+NTCPS +C+  +G D VFSK+TLR C+   
Sbjct: 724  CNDPPEEPVITMCGHVFCYQCVSEYLTGDDNTCPSVNCKELIGDDLVFSKATLRSCISDD 783

Query: 181  XXXXXXXXNPSSETNKSIVLQNEYSSSKIKAVLEILQSHCK 303
                      S   + S+V Q +Y+SSKIKAVLE+LQS+CK
Sbjct: 784  GGSVSFAN--SHLCDYSLVQQRDYTSSKIKAVLEVLQSNCK 822


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