BLASTX nr result
ID: Panax21_contig00029895
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00029895 (414 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent hel... 152 3e-35 ref|XP_002310362.1| chromatin remodeling complex subunit [Populu... 141 6e-32 ref|XP_002513133.1| DNA repair helicase rad5,16, putative [Ricin... 140 1e-31 emb|CBI35366.3| unnamed protein product [Vitis vinifera] 138 4e-31 ref|XP_003555190.1| PREDICTED: ATP-dependent helicase ULS1-like ... 125 5e-27 >ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like [Vitis vinifera] Length = 1013 Score = 152 bits (384), Expect = 3e-35 Identities = 75/125 (60%), Positives = 86/125 (68%) Frame = +1 Query: 1 CNDPPEDAIVTMCGHVYCYQCVSEYLRGDENTCPSPDCRGQLGPDAVFSKSTLRRCLYXX 180 CNDPPEDA+VTMCGHV+CYQCVSEYL GD+NTCP+ +C+ QLG D VFSK+TL C+ Sbjct: 734 CNDPPEDAVVTMCGHVFCYQCVSEYLTGDDNTCPALECKEQLGADVVFSKATLISCI--S 791 Query: 181 XXXXXXXXNPSSETNKSIVLQNEYSSSKIKAVLEILQSHCKSNSPGSQVHGMVRLNGVSS 360 N S KSI LQNEYSSSKI+A LEILQSHCK SP S H + NG S Sbjct: 792 DELDGSLSNSSQSAEKSINLQNEYSSSKIRAALEILQSHCKLTSPDSDPHSSMGCNGSYS 851 Query: 361 STGKE 375 + E Sbjct: 852 NPETE 856 >ref|XP_002310362.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222853265|gb|EEE90812.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 923 Score = 141 bits (355), Expect = 6e-32 Identities = 67/111 (60%), Positives = 85/111 (76%) Frame = +1 Query: 1 CNDPPEDAIVTMCGHVYCYQCVSEYLRGDENTCPSPDCRGQLGPDAVFSKSTLRRCLYXX 180 C DPPED++VTMCGHV+C QCVSEYL GD+NTCP+ DC+ QLG D VFS++TLRR + Sbjct: 642 CRDPPEDSVVTMCGHVFCNQCVSEYLTGDDNTCPASDCKEQLGSDVVFSEATLRRRI--- 698 Query: 181 XXXXXXXXNPSSETNKSIVLQNEYSSSKIKAVLEILQSHCKSNSPGSQVHG 333 + S +KSIVLQ+EY+SSKIKAVLE++QSHCK+ SP S+ +G Sbjct: 699 SDTFDASSSHSKFDDKSIVLQHEYNSSKIKAVLEVIQSHCKAGSPISEFNG 749 >ref|XP_002513133.1| DNA repair helicase rad5,16, putative [Ricinus communis] gi|223548144|gb|EEF49636.1| DNA repair helicase rad5,16, putative [Ricinus communis] Length = 993 Score = 140 bits (353), Expect = 1e-31 Identities = 67/121 (55%), Positives = 85/121 (70%) Frame = +1 Query: 1 CNDPPEDAIVTMCGHVYCYQCVSEYLRGDENTCPSPDCRGQLGPDAVFSKSTLRRCLYXX 180 CNDPPED +VTMC HV+CYQCVSEYL GD+N CP+ C+ LGPD VFS++TLR C+ Sbjct: 712 CNDPPEDPVVTMCDHVFCYQCVSEYLTGDDNMCPARGCKELLGPDVVFSEATLRSCM--S 769 Query: 181 XXXXXXXXNPSSETNKSIVLQNEYSSSKIKAVLEILQSHCKSNSPGSQVHGMVRLNGVSS 360 P + +++VLQNEYSSSKI+AVLEILQSHC+ SP ++ G NG S+ Sbjct: 770 DNLDAGPKRPEFD-ERAMVLQNEYSSSKIRAVLEILQSHCQVKSPSPELGGATEYNGSST 828 Query: 361 S 363 + Sbjct: 829 A 829 >emb|CBI35366.3| unnamed protein product [Vitis vinifera] Length = 907 Score = 138 bits (348), Expect = 4e-31 Identities = 67/103 (65%), Positives = 76/103 (73%) Frame = +1 Query: 1 CNDPPEDAIVTMCGHVYCYQCVSEYLRGDENTCPSPDCRGQLGPDAVFSKSTLRRCLYXX 180 CNDPPEDA+VTMCGHV+CYQCVSEYL GD+NTCP+ +C+ QLG D VFSK+TL C+ Sbjct: 646 CNDPPEDAVVTMCGHVFCYQCVSEYLTGDDNTCPALECKEQLGADVVFSKATLISCI--S 703 Query: 181 XXXXXXXXNPSSETNKSIVLQNEYSSSKIKAVLEILQSHCKSN 309 N S KSI LQNEYSSSKI+A LEILQSH SN Sbjct: 704 DELDGSLSNSSQSAEKSINLQNEYSSSKIRAALEILQSHSYSN 746 >ref|XP_003555190.1| PREDICTED: ATP-dependent helicase ULS1-like [Glycine max] Length = 1027 Score = 125 bits (313), Expect = 5e-27 Identities = 58/101 (57%), Positives = 74/101 (73%) Frame = +1 Query: 1 CNDPPEDAIVTMCGHVYCYQCVSEYLRGDENTCPSPDCRGQLGPDAVFSKSTLRRCLYXX 180 CNDPPE+ ++TMCGHV+CYQCVSEYL GD+NTCPS +C+ +G D VFSK+TLR C+ Sbjct: 724 CNDPPEEPVITMCGHVFCYQCVSEYLTGDDNTCPSVNCKELIGDDLVFSKATLRSCISDD 783 Query: 181 XXXXXXXXNPSSETNKSIVLQNEYSSSKIKAVLEILQSHCK 303 S + S+V Q +Y+SSKIKAVLE+LQS+CK Sbjct: 784 GGSVSFAN--SHLCDYSLVQQRDYTSSKIKAVLEVLQSNCK 822