BLASTX nr result

ID: Panax21_contig00029852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029852
         (671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521549.1| conserved hypothetical protein [Ricinus comm...   215   5e-54
ref|XP_002327791.1| predicted protein [Populus trichocarpa] gi|2...   206   4e-51
ref|XP_002310256.1| predicted protein [Populus trichocarpa] gi|2...   199   5e-49
emb|CBI17486.3| unnamed protein product [Vitis vinifera]              197   1e-48
ref|XP_002264304.1| PREDICTED: uncharacterized protein LOC100259...   197   1e-48

>ref|XP_002521549.1| conserved hypothetical protein [Ricinus communis]
           gi|223539227|gb|EEF40820.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 475

 Score =  215 bits (548), Expect = 5e-54
 Identities = 121/216 (56%), Positives = 144/216 (66%), Gaps = 4/216 (1%)
 Frame = +2

Query: 35  GVSDGELGSSELKNGQTAQNGSMKSVTLNGLRDAELDDFFDPHDSTSVKSNXXXXXXXXX 214
           G S+GE  S   + G   +N   K V+LN  RD E +DFFDP +S S  SN         
Sbjct: 191 GDSNGEFESRIARKGWANENDVTKLVSLNSERDGESEDFFDPQESMSYTSNTDGEDNCGV 250

Query: 215 XXXXXXXX--PMAEFYDAWEELSSESGPQPPLIDVEAELHEIRLSLFMEIEKRKQAEESL 388
                     P+ EFYDAWEELSSESG Q    D+EAEL E+RLSL +EIEKRKQAEE+L
Sbjct: 251 ESSIKLAATTPVGEFYDAWEELSSESGQQSSFRDIEAELREMRLSLLVEIEKRKQAEETL 310

Query: 389 NVTRSHWLRFRQQLSIVGLTLSADPIGAVEDEHV--GDPAVELCQQVYVARYVSNSIGRG 562
           N  ++HW R R+QL++VGLTL A P    E E     DPA ELCQQVY+AR+VS+SIGRG
Sbjct: 311 NNAQNHWQRMREQLALVGLTLPAFPFADPEGELSLDTDPAEELCQQVYLARFVSDSIGRG 370

Query: 563 SAKAEVEVEMEAQLEAKKFEIARLWDRLNYYVAVNR 670
            AKAE E+E EAQ+EAK FEIARL DRL+YY A+NR
Sbjct: 371 MAKAEAEMEKEAQIEAKNFEIARLVDRLHYYEAMNR 406


>ref|XP_002327791.1| predicted protein [Populus trichocarpa] gi|222836876|gb|EEE75269.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  206 bits (523), Expect = 4e-51
 Identities = 117/227 (51%), Positives = 146/227 (64%), Gaps = 14/227 (6%)
 Frame = +2

Query: 32  NGVSDGELGSSELKNGQ-------TAQNGSMKSVTLNGLRDAELDDFFDPHDSTSVKSNX 190
           NG  DGE+ S  +++G        T +   +K    NG RD ++DDFFDP DS S  SN 
Sbjct: 158 NGKIDGEIASGTMQHGTSNTRTDFTLEKDVLKPTEQNGERDGDVDDFFDPQDSMSYTSNT 217

Query: 191 XXXXXXXXXXXXXXXX--PMAEFYDAWEELSSESGPQP---PLIDVEAELHEIRLSLFME 355
                             P+ EFYDAWEELSSESGP P   P +   AEL E+RLSL ME
Sbjct: 218 DVEDTTAAECSMKLTAAIPVGEFYDAWEELSSESGPHPSPSPHLS-GAELREMRLSLLME 276

Query: 356 IEKRKQAEESLNVTRSHWLRFRQQLSIVGLTLSADPIGAVEDEHVGD--PAVELCQQVYV 529
           IEKRKQAEE+L   ++ W R RQ+L++VGL+L A P+   E++   D  PA E+CQQ+Y+
Sbjct: 277 IEKRKQAEEALTNMQNQWQRIRQELALVGLSLPAFPVDVPENDQPSDSNPAEEICQQIYL 336

Query: 530 ARYVSNSIGRGSAKAEVEVEMEAQLEAKKFEIARLWDRLNYYVAVNR 670
           AR+VS SIGRG AKAE E+E+EAQ+E K FEIARL DRL+YY AVNR
Sbjct: 337 ARFVSESIGRGIAKAEAEIELEAQVEEKNFEIARLCDRLHYYEAVNR 383


>ref|XP_002310256.1| predicted protein [Populus trichocarpa] gi|222853159|gb|EEE90706.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score =  199 bits (505), Expect = 5e-49
 Identities = 112/220 (50%), Positives = 141/220 (64%), Gaps = 6/220 (2%)
 Frame = +2

Query: 29  DNGVSDGELGSSELKNGQTAQNGSMKSVTLNGLRDAELDDFFDPHDSTSVKSNXXXXXXX 208
           D+  S  +LG+ + +   + +   +K +  N  R+ + DDFFDP DS S  SN       
Sbjct: 125 DSRSSSVQLGTGDTRKDLSLEKDMLKPIEQNVERNGDSDDFFDPQDSMSYTSNTDVEDTT 184

Query: 209 XXXXXXXXXX--PMAEFYDAWEELSSESGPQPPLIDVE--AELHEIRLSLFMEIEKRKQA 376
                       P+ EFYDAWEELSSESG QP        AEL E+RLSL MEIEKRKQA
Sbjct: 185 AVESSMKLTAALPVGEFYDAWEELSSESGQQPSPSPHHNGAELREMRLSLLMEIEKRKQA 244

Query: 377 EESLNVTRSHWLRFRQQLSIVGLTLSADPIGAVEDEHVGD--PAVELCQQVYVARYVSNS 550
           EE+L+  +S W R RQ+L++VGL+L A P+   E +   D  P  E+CQQ+Y+AR+VS S
Sbjct: 245 EEALDNMQSQWQRIRQELALVGLSLPACPVDVPESDQPSDVNPVEEICQQIYLARFVSES 304

Query: 551 IGRGSAKAEVEVEMEAQLEAKKFEIARLWDRLNYYVAVNR 670
           IGRG AKAE E+EMEAQ+EAK FEIARL DRL+YY AVNR
Sbjct: 305 IGRGIAKAEAEIEMEAQVEAKNFEIARLLDRLHYYEAVNR 344


>emb|CBI17486.3| unnamed protein product [Vitis vinifera]
          Length = 498

 Score =  197 bits (502), Expect = 1e-48
 Identities = 119/235 (50%), Positives = 141/235 (60%), Gaps = 15/235 (6%)
 Frame = +2

Query: 11  PIPVEDDNGVSDGELGSSELKNGQTAQNGSMKSVTLNGLRDAELD--------------D 148
           PI  E  NG  + +  SS  KN    +NG +KS  +N  RD + D              D
Sbjct: 195 PIVEEPVNGFHNEKPESSNSKNIFATENGPLKSDAVNSERDGDGDGDGDGDGDGDGDGDD 254

Query: 149 FFDPHDSTSVKSNXXXXXXXXXXXXXXXXXPMAEFYDAWEELSSESGPQPPLIDVEAELH 328
           FFDP +S S  SN                 PM EFYDAWEELSSE   QP   ++E E+ 
Sbjct: 255 FFDPQESMSFTSNTEGEDFNGAEHSLKLTTPMGEFYDAWEELSSEGAQQPSHREIEDEMR 314

Query: 329 EIRLSLFMEIEKRKQAEESLNVTRSHWLRFRQQLSIVGLTLSADPIGAVEDEHVG-DPAV 505
           EIRLSL  EIEKRKQAEE+L   R+ W    QQLS+VGLTL AD     ED     D A 
Sbjct: 315 EIRLSLLTEIEKRKQAEEALKNMRNVWQTISQQLSLVGLTLPADLAVVGEDGQPDVDIAQ 374

Query: 506 ELCQQVYVARYVSNSIGRGSAKAEVEVEMEAQLEAKKFEIARLWDRLNYYVAVNR 670
           EL QQV +AR+VS+SIGRG AKA+VE+EMEAQ+++K FEIARLWDRL+YY AVNR
Sbjct: 375 ELSQQVSIARFVSDSIGRGIAKAQVEMEMEAQIDSKNFEIARLWDRLHYYDAVNR 429


>ref|XP_002264304.1| PREDICTED: uncharacterized protein LOC100259904 [Vitis vinifera]
          Length = 443

 Score =  197 bits (502), Expect = 1e-48
 Identities = 119/235 (50%), Positives = 141/235 (60%), Gaps = 15/235 (6%)
 Frame = +2

Query: 11  PIPVEDDNGVSDGELGSSELKNGQTAQNGSMKSVTLNGLRDAELD--------------D 148
           PI  E  NG  + +  SS  KN    +NG +KS  +N  RD + D              D
Sbjct: 140 PIVEEPVNGFHNEKPESSNSKNIFATENGPLKSDAVNSERDGDGDGDGDGDGDGDGDGDD 199

Query: 149 FFDPHDSTSVKSNXXXXXXXXXXXXXXXXXPMAEFYDAWEELSSESGPQPPLIDVEAELH 328
           FFDP +S S  SN                 PM EFYDAWEELSSE   QP   ++E E+ 
Sbjct: 200 FFDPQESMSFTSNTEGEDFNGAEHSLKLTTPMGEFYDAWEELSSEGAQQPSHREIEDEMR 259

Query: 329 EIRLSLFMEIEKRKQAEESLNVTRSHWLRFRQQLSIVGLTLSADPIGAVEDEHVG-DPAV 505
           EIRLSL  EIEKRKQAEE+L   R+ W    QQLS+VGLTL AD     ED     D A 
Sbjct: 260 EIRLSLLTEIEKRKQAEEALKNMRNVWQTISQQLSLVGLTLPADLAVVGEDGQPDVDIAQ 319

Query: 506 ELCQQVYVARYVSNSIGRGSAKAEVEVEMEAQLEAKKFEIARLWDRLNYYVAVNR 670
           EL QQV +AR+VS+SIGRG AKA+VE+EMEAQ+++K FEIARLWDRL+YY AVNR
Sbjct: 320 ELSQQVSIARFVSDSIGRGIAKAQVEMEMEAQIDSKNFEIARLWDRLHYYDAVNR 374


Top