BLASTX nr result

ID: Panax21_contig00029823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029823
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511647.1| DNA binding protein, putative [Ricinus commu...   152   3e-35
ref|XP_002320711.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34
ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [...   142   3e-32
emb|CBI16589.3| unnamed protein product [Vitis vinifera]              142   3e-32
ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [...   137   7e-31

>ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
           gi|223548827|gb|EEF50316.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 465

 Score =  152 bits (384), Expect = 3e-35
 Identities = 78/125 (62%), Positives = 94/125 (75%), Gaps = 4/125 (3%)
 Frame = +2

Query: 65  MNQCVPSWDLDEN----SKLNFRSHSNSLSITPDVPTLDYEVAELTWENGQLSMHGLGHP 232
           M QCVPSWDL++N    +K +FRS+SNS +  PDVP LDYEVAELTWENGQLSMHGLG P
Sbjct: 1   MTQCVPSWDLEDNPSPAAKHSFRSNSNSSA--PDVPMLDYEVAELTWENGQLSMHGLGPP 58

Query: 233 RVPTKSQPTTSHTKYTWDKPSAGGTLESIVDQATFFPDYKFTVDGSCGGGDDNVDELVPW 412
           R+P K+ P++S +KYTW+KP AGGTLESIV+QAT  P  + T D   G G    +E+VPW
Sbjct: 59  RLPVKTIPSSSPSKYTWEKPRAGGTLESIVNQATRLPQQRKT-DNITGYGS---NEVVPW 114

Query: 413 FNHHH 427
             HHH
Sbjct: 115 LGHHH 119


>ref|XP_002320711.1| predicted protein [Populus trichocarpa] gi|222861484|gb|EEE99026.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  148 bits (374), Expect = 4e-34
 Identities = 77/127 (60%), Positives = 90/127 (70%), Gaps = 5/127 (3%)
 Frame = +2

Query: 68  NQCVPSWDLDENS----KLNFRSHSNSLSITPDVPTLDYEVAELTWENGQLSMHGLGHPR 235
           +QCVPSW++D+N     KL+ R HSNS +  PD+P LDYEVAELTWENGQ++MHGLG PR
Sbjct: 3   HQCVPSWEVDDNRTTAPKLSLRFHSNSSA--PDMPMLDYEVAELTWENGQIAMHGLGPPR 60

Query: 236 VPTKSQPTTSHTKYTWDKPSAGGTLESIVDQATFFPD-YKFTVDGSCGGGDDNVDELVPW 412
           VP K   +TS +KYTWDKP A GTLESIV+QAT  P   K T D S G   D    L+PW
Sbjct: 61  VPAKPIASTSPSKYTWDKPRASGTLESIVNQATCVPQCNKATFDNSTGSDHD----LIPW 116

Query: 413 FNHHHRS 433
           FNHH  S
Sbjct: 117 FNHHKAS 123


>ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
          Length = 465

 Score =  142 bits (358), Expect = 3e-32
 Identities = 72/122 (59%), Positives = 88/122 (72%), Gaps = 3/122 (2%)
 Frame = +2

Query: 65  MNQCVPSWDLDENS---KLNFRSHSNSLSITPDVPTLDYEVAELTWENGQLSMHGLGHPR 235
           M+QCVPSWD+D+N    +L  RSHSNS +  PDVP LDYEVAELTWENGQL+MHGLG PR
Sbjct: 1   MSQCVPSWDIDDNPTPPRLFLRSHSNSTA--PDVPMLDYEVAELTWENGQLAMHGLGQPR 58

Query: 236 VPTKSQPTTSHTKYTWDKPSAGGTLESIVDQATFFPDYKFTVDGSCGGGDDNVDELVPWF 415
           VP K   + + +KY W+KP AGGTLESIV+QAT  P +K   +G+        D+LVPW 
Sbjct: 59  VPAKPVASAAVSKYPWEKPRAGGTLESIVNQATRLPHHKPPPEGA-------NDDLVPWL 111

Query: 416 NH 421
           +H
Sbjct: 112 DH 113


>emb|CBI16589.3| unnamed protein product [Vitis vinifera]
          Length = 278

 Score =  142 bits (358), Expect = 3e-32
 Identities = 72/122 (59%), Positives = 88/122 (72%), Gaps = 3/122 (2%)
 Frame = +2

Query: 65  MNQCVPSWDLDENS---KLNFRSHSNSLSITPDVPTLDYEVAELTWENGQLSMHGLGHPR 235
           M+QCVPSWD+D+N    +L  RSHSNS +  PDVP LDYEVAELTWENGQL+MHGLG PR
Sbjct: 1   MSQCVPSWDIDDNPTPPRLFLRSHSNSTA--PDVPMLDYEVAELTWENGQLAMHGLGQPR 58

Query: 236 VPTKSQPTTSHTKYTWDKPSAGGTLESIVDQATFFPDYKFTVDGSCGGGDDNVDELVPWF 415
           VP K   + + +KY W+KP AGGTLESIV+QAT  P +K   +G+        D+LVPW 
Sbjct: 59  VPAKPVASAAVSKYPWEKPRAGGTLESIVNQATRLPHHKPPPEGA-------NDDLVPWL 111

Query: 416 NH 421
           +H
Sbjct: 112 DH 113


>ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max]
          Length = 458

 Score =  137 bits (346), Expect = 7e-31
 Identities = 75/124 (60%), Positives = 88/124 (70%), Gaps = 4/124 (3%)
 Frame = +2

Query: 65  MNQCVPSWDLDEN---SKLNFRSHSNSLSITPDVPTLDYEVAELTWENGQLSMHGLGHPR 235
           M+QCVPSWD+++N   S+++ RS+SNS +  PDVP LDYEVAELTWENGQLSMHGLG PR
Sbjct: 1   MSQCVPSWDVEDNPPPSRVSLRSNSNSTA--PDVPMLDYEVAELTWENGQLSMHGLGLPR 58

Query: 236 VPTKSQPTTSHTKYTWDKPSAGGTLESIVDQATFFPDY-KFTVDGSCGGGDDNVDELVPW 412
           VP K  PT    KYTW+KP A GTLESIV+Q T FP   K T     GGG    +  VPW
Sbjct: 59  VPVK-PPTAVTNKYTWEKPRASGTLESIVNQVTSFPHRGKPTPLNGGGGGGVYGNFRVPW 117

Query: 413 FNHH 424
           F+ H
Sbjct: 118 FDPH 121