BLASTX nr result

ID: Panax21_contig00029765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029765
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521498.1| NAC domain-containing protein, putative [Ric...    81   7e-14
ref|XP_002316163.1| NAC domain protein, IPR003441 [Populus trich...    76   2e-13
ref|XP_002269543.1| PREDICTED: protein SOMBRERO [Vitis vinifera]       76   2e-13
emb|CAN64706.1| hypothetical protein VITISV_029008 [Vitis vinifera]    76   2e-13
ref|XP_003546845.1| PREDICTED: protein SOMBRERO-like [Glycine max]     66   8e-12

>ref|XP_002521498.1| NAC domain-containing protein, putative [Ricinus communis]
           gi|223539295|gb|EEF40887.1| NAC domain-containing
           protein, putative [Ricinus communis]
          Length = 314

 Score = 80.9 bits (198), Expect(2) = 7e-14
 Identities = 49/90 (54%), Positives = 59/90 (65%), Gaps = 8/90 (8%)
 Frame = -3

Query: 412 FDGSMQLPQLFTTESSTISTVHHPSFLCP----SPAMEASQNLLRLTSGGPGLVQAPDRF 245
           FDGSM LPQLF+ ES+ +     PSF+ P    +  +E SQNLLRLTS   GLVQ P+RF
Sbjct: 203 FDGSMHLPQLFSPESAAVP----PSFVTPLSLNTMDIECSQNLLRLTSTSCGLVQ-PERF 257

Query: 244 KADWSFLDKLLTDHQTC----RCNPSSQAL 167
             DWSFLDKLL  HQ+     + NPSSQ +
Sbjct: 258 HGDWSFLDKLLASHQSLDHQGKGNPSSQVV 287



 Score = 20.8 bits (42), Expect(2) = 7e-14
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 126 QRFPFQYLG 100
           Q+FPF YLG
Sbjct: 296 QKFPFPYLG 304


>ref|XP_002316163.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222865203|gb|EEF02334.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 318

 Score = 75.9 bits (185), Expect(2) = 2e-13
 Identities = 41/71 (57%), Positives = 45/71 (63%)
 Frame = -3

Query: 412 FDGSMQLPQLFTTESSTISTVHHPSFLCPSPAMEASQNLLRLTSGGPGLVQAPDRFKADW 233
           FDGSM LPQLF+ ES+   +   P  L     +E SQNLLRLTS G GLVQ   RF  DW
Sbjct: 203 FDGSMHLPQLFSPESAVAPSFVSPLSLNNMDDIECSQNLLRLTSTGCGLVQPAGRFNGDW 262

Query: 232 SFLDKLLTDHQ 200
           SFLDKLL   Q
Sbjct: 263 SFLDKLLASQQ 273



 Score = 24.6 bits (52), Expect(2) = 2e-13
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = -1

Query: 132 SVQRFPFQYLG 100
           S Q+FPFQYLG
Sbjct: 298 STQKFPFQYLG 308


>ref|XP_002269543.1| PREDICTED: protein SOMBRERO [Vitis vinifera]
          Length = 312

 Score = 75.9 bits (185), Expect(2) = 2e-13
 Identities = 46/92 (50%), Positives = 57/92 (61%), Gaps = 10/92 (10%)
 Frame = -3

Query: 412 FDGSMQLPQLFTTESSTISTVHHPSFLCP----SPAMEASQNLLRLTSGGPGLVQAPDRF 245
           FDGSM LPQL + ES+       PSF+ P    +  +E SQNLLRLTS G GL+Q  +R 
Sbjct: 201 FDGSMHLPQLLSPESAV-----PPSFISPLSLNTMDIECSQNLLRLTSTGCGLIQQ-ERM 254

Query: 244 KADWSFLDKLLTDHQT------CRCNPSSQAL 167
             DWSFLDKLL  HQ+       +C+PSSQ +
Sbjct: 255 NGDWSFLDKLLASHQSLDQHSQTKCHPSSQVV 286



 Score = 24.6 bits (52), Expect(2) = 2e-13
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = -1

Query: 132 SVQRFPFQYLG 100
           S Q+FPFQYLG
Sbjct: 292 SAQKFPFQYLG 302


>emb|CAN64706.1| hypothetical protein VITISV_029008 [Vitis vinifera]
          Length = 311

 Score = 75.9 bits (185), Expect(2) = 2e-13
 Identities = 46/92 (50%), Positives = 57/92 (61%), Gaps = 10/92 (10%)
 Frame = -3

Query: 412 FDGSMQLPQLFTTESSTISTVHHPSFLCP----SPAMEASQNLLRLTSGGPGLVQAPDRF 245
           FDGSM LPQL + ES+       PSF+ P    +  +E SQNLLRLTS G GL+Q  +R 
Sbjct: 200 FDGSMHLPQLLSPESAV-----PPSFISPLSLNTMDIECSQNLLRLTSTGCGLIQQ-ERM 253

Query: 244 KADWSFLDKLLTDHQT------CRCNPSSQAL 167
             DWSFLDKLL  HQ+       +C+PSSQ +
Sbjct: 254 NGDWSFLDKLLASHQSLDQHSQTKCHPSSQVV 285



 Score = 24.6 bits (52), Expect(2) = 2e-13
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = -1

Query: 132 SVQRFPFQYLG 100
           S Q+FPFQYLG
Sbjct: 291 SAQKFPFQYLG 301


>ref|XP_003546845.1| PREDICTED: protein SOMBRERO-like [Glycine max]
          Length = 326

 Score = 66.2 bits (160), Expect(2) = 8e-12
 Identities = 43/87 (49%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
 Frame = -3

Query: 412 FDGSMQLPQLFTTESSTISTVHHPSFLCPSPAM---EASQNLLRLTSGGPGL----VQAP 254
           FDG+M LPQLF+ ES+ I+   + S      AM   E SQNLLRLT+ G GL     Q  
Sbjct: 206 FDGTMHLPQLFSPESA-IAPPTNSSLALSMNAMDILECSQNLLRLTTTGCGLNLMQQQQE 264

Query: 253 DRFKADWSFLDKLLTDH---QTCRCNP 182
           +RF  DWSFLDKLL  H      +CNP
Sbjct: 265 ERFSGDWSFLDKLLASHHGMDQSKCNP 291



 Score = 28.5 bits (62), Expect(2) = 8e-12
 Identities = 15/24 (62%), Positives = 16/24 (66%)
 Frame = -1

Query: 132 SVQRFPFQYLGSCDQATHDNFKVS 61
           S Q+FPF YLG CD  THD  K S
Sbjct: 304 SAQKFPFHYLG-CD-TTHDIMKFS 325


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