BLASTX nr result

ID: Panax21_contig00029752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029752
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511041.1| polyadenylate-binding protein, putative [Ric...   128   5e-28
ref|XP_002511038.1| polyadenylate-binding protein, putative [Ric...   128   5e-28
ref|XP_002279148.1| PREDICTED: polyadenylate-binding protein 2-l...   123   2e-26
emb|CAN77560.1| hypothetical protein VITISV_031100 [Vitis vinifera]   123   2e-26
ref|XP_002339510.1| predicted protein [Populus trichocarpa] gi|2...   122   4e-26

>ref|XP_002511041.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223550156|gb|EEF51643.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 231

 Score =  128 bits (322), Expect = 5e-28
 Identities = 59/66 (89%), Positives = 65/66 (98%)
 Frame = -3

Query: 540 LTDKFGQPKGFAYVEFVELDAIQNALLLNESELHGRQLKVAAKRTNVPGLKQFRGRRPNP 361
           LTDKFGQPKGFAYVEFVE+DA+QNALLLNESELHGRQLKV+AKRTN+PG+KQ+RGRRPNP
Sbjct: 137 LTDKFGQPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNIPGMKQYRGRRPNP 196

Query: 360 YFGFRS 343
           Y GFRS
Sbjct: 197 YSGFRS 202


>ref|XP_002511038.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223550153|gb|EEF51640.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 234

 Score =  128 bits (322), Expect = 5e-28
 Identities = 59/66 (89%), Positives = 65/66 (98%)
 Frame = -3

Query: 540 LTDKFGQPKGFAYVEFVELDAIQNALLLNESELHGRQLKVAAKRTNVPGLKQFRGRRPNP 361
           LTDKFGQPKGFAYVEFVE+DA+QNALLLNESELHGRQLKV+AKRTN+PG+KQ+RGRRPNP
Sbjct: 153 LTDKFGQPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNIPGMKQYRGRRPNP 212

Query: 360 YFGFRS 343
           Y GFRS
Sbjct: 213 YSGFRS 218


>ref|XP_002279148.1| PREDICTED: polyadenylate-binding protein 2-like [Vitis vinifera]
          Length = 226

 Score =  123 bits (308), Expect = 2e-26
 Identities = 58/65 (89%), Positives = 64/65 (98%)
 Frame = -3

Query: 540 LTDKFGQPKGFAYVEFVELDAIQNALLLNESELHGRQLKVAAKRTNVPGLKQFRGRRPNP 361
           LTDKFGQPKGFAYVEFVE+DA+QNALLLNESELHGRQLKV+AKRTN+PG+KQ+RGRRPNP
Sbjct: 131 LTDKFGQPKGFAYVEFVEIDAVQNALLLNESELHGRQLKVSAKRTNIPGMKQYRGRRPNP 190

Query: 360 YFGFR 346
            FGFR
Sbjct: 191 -FGFR 194


>emb|CAN77560.1| hypothetical protein VITISV_031100 [Vitis vinifera]
          Length = 175

 Score =  123 bits (308), Expect = 2e-26
 Identities = 58/65 (89%), Positives = 64/65 (98%)
 Frame = -3

Query: 540 LTDKFGQPKGFAYVEFVELDAIQNALLLNESELHGRQLKVAAKRTNVPGLKQFRGRRPNP 361
           LTDKFGQPKGFAYVEFVE+DA+QNALLLNESELHGRQLKV+AKRTN+PG+KQ+RGRRPNP
Sbjct: 80  LTDKFGQPKGFAYVEFVEIDAVQNALLLNESELHGRQLKVSAKRTNIPGMKQYRGRRPNP 139

Query: 360 YFGFR 346
            FGFR
Sbjct: 140 -FGFR 143


>ref|XP_002339510.1| predicted protein [Populus trichocarpa] gi|222832586|gb|EEE71063.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  122 bits (306), Expect = 4e-26
 Identities = 60/66 (90%), Positives = 64/66 (96%)
 Frame = -3

Query: 540 LTDKFGQPKGFAYVEFVELDAIQNALLLNESELHGRQLKVAAKRTNVPGLKQFRGRRPNP 361
           LTDKFGQPKGFAYVEFVE+DAIQNALLLNESELHGRQLKV+AKRTNVPG+KQFRGRRP+P
Sbjct: 132 LTDKFGQPKGFAYVEFVEVDAIQNALLLNESELHGRQLKVSAKRTNVPGMKQFRGRRPSP 191

Query: 360 YFGFRS 343
           Y G RS
Sbjct: 192 Y-GLRS 196


Top