BLASTX nr result

ID: Panax21_contig00029725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029725
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein C...    81   8e-14
ref|XP_002519098.1| conserved hypothetical protein [Ricinus comm...    80   2e-13
ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein C...    80   2e-13
ref|XP_004162745.1| PREDICTED: cytochrome c biogenesis protein C...    75   4e-12
ref|XP_004137133.1| PREDICTED: cytochrome c biogenesis protein C...    75   6e-12

>ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like
           [Glycine max]
          Length = 563

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 59/152 (38%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
 Frame = -1

Query: 437 ALNTTNRILKLSNPQTHLIKFPSF-------PYNSRNYDLYNKRIFPFTITTCKLAKTST 279
           A+NT+N  L    PQTH +K P F       P+++ ++        P TI+ CKL  +  
Sbjct: 8   AINTSNPCL----PQTHFLKVPIFHPFFRFKPFSNSSHGAKRAHTLPLTIS-CKLKNSQE 62

Query: 278 DAIKNKNVPIKIVGPDEKAPLLXXXXXXXXXXXXAQRKPRWKTAAXXXXXXLKRFPKKVL 99
              K K+V  KIV  +   P L                 + K         L+R   K L
Sbjct: 63  MKNKGKSVSQKIVLSEASPPPLTEDDKNNGDSKDVPESSKKKGGLSGVANMLRR---KTL 119

Query: 98  SILSNLPLAIGEMFTIAGLMALGTVIDQGEAP 3
            ILSNLPLAIGEMF +A LMALGT IDQGEAP
Sbjct: 120 QILSNLPLAIGEMFAVASLMALGTFIDQGEAP 151


>ref|XP_002519098.1| conserved hypothetical protein [Ricinus communis]
           gi|223541761|gb|EEF43309.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 556

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 56/141 (39%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
 Frame = -1

Query: 410 KLSNPQTHLIKFPSF-----PYNSRNYDLYNKRIFPFTITTCKLAKTSTDAIKNKNVPIK 246
           K S  +TH I F  F       N + + L N+R    +++ CKL  +     K+KNV  K
Sbjct: 8   KPSPLKTHFINFHPFINSTIKLNPQIHILCNRRALSLSVS-CKLKTSKEVENKDKNVSRK 66

Query: 245 IVGPDEKAPLLXXXXXXXXXXXXAQRKPRWKTAAXXXXXXLKRFPKKVLSILSNLPLAIG 66
           I+  +   P+              +   +            KR P+KVLS+LSNLPLAIG
Sbjct: 67  ILLSNSAPPV----SEEGGAGNNGEIPDKAAKGGGGPLRFFKRLPRKVLSVLSNLPLAIG 122

Query: 65  EMFTIAGLMALGTVIDQGEAP 3
           EMF IAGLMALGTVIDQG+AP
Sbjct: 123 EMFAIAGLMALGTVIDQGQAP 143


>ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic
           [Vitis vinifera] gi|297741415|emb|CBI32546.3| unnamed
           protein product [Vitis vinifera]
          Length = 557

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 59/124 (47%), Positives = 69/124 (55%), Gaps = 2/124 (1%)
 Frame = -1

Query: 368 FPYNSRNYDLYNKRIFPFTITTCKLAKTSTDAIKNKNVPIKIVGPDEKAPLLXXXXXXXX 189
           FPY ++     +     F+IT CKL KTS D   +K++  KIV   E AP +        
Sbjct: 28  FPYTTQISSPCSSTPLSFSIT-CKL-KTSEDGKSSKSLAKKIV-LSEGAPAVSEDGAGNG 84

Query: 188 XXXXAQRKPRWKTAAXXXXXXL--KRFPKKVLSILSNLPLAIGEMFTIAGLMALGTVIDQ 15
                Q KP  K            KRFP+KVLS LSNLPLAIGEMFT+A LMALGT IDQ
Sbjct: 85  EA---QPKPASKGGGGGGGFGGLVKRFPRKVLSRLSNLPLAIGEMFTVAALMALGTAIDQ 141

Query: 14  GEAP 3
           GEAP
Sbjct: 142 GEAP 145


>ref|XP_004162745.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like
           [Cucumis sativus]
          Length = 560

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 70/152 (46%), Positives = 82/152 (53%), Gaps = 2/152 (1%)
 Frame = -1

Query: 452 SMETLALNTTNRILKLSNPQTHLIKFPSFPYN--SRNYDLYNKRIFPFTITTCKLAKTST 279
           +ME L LN  N    LS P   L+K  SF ++  S    L   +I  F++T CK  K S 
Sbjct: 10  TMERLILNNLNP--SLSKP--FLLK-TSFLHSVFSHQITLRTAQIRSFSVT-CK-NKASQ 62

Query: 278 DAIKNKNVPIKIVGPDEKAPLLXXXXXXXXXXXXAQRKPRWKTAAXXXXXXLKRFPKKVL 99
           D  K KN   KIV   E AP L            A+ KP   + +       KR PK++L
Sbjct: 63  DK-KLKNASNKIV-LSEAAPPLAEEESDKSGNAEAEVKPGNGSRSMKLV---KRLPKRIL 117

Query: 98  SILSNLPLAIGEMFTIAGLMALGTVIDQGEAP 3
             LSNLPLAIGEMFTIA LMALGTVIDQGEAP
Sbjct: 118 GALSNLPLAIGEMFTIAALMALGTVIDQGEAP 149


>ref|XP_004137133.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like
           [Cucumis sativus]
          Length = 557

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 70/151 (46%), Positives = 81/151 (53%), Gaps = 2/151 (1%)
 Frame = -1

Query: 449 METLALNTTNRILKLSNPQTHLIKFPSFPYN--SRNYDLYNKRIFPFTITTCKLAKTSTD 276
           ME L LN  N    LS P   L+K  SF ++  S    L   +I  F++T CK  K S D
Sbjct: 1   MERLILNNLNP--SLSKP--FLLK-TSFLHSVFSHQITLRTAQIRSFSVT-CK-NKASQD 53

Query: 275 AIKNKNVPIKIVGPDEKAPLLXXXXXXXXXXXXAQRKPRWKTAAXXXXXXLKRFPKKVLS 96
             K KN   KIV   E AP L            A+ KP   + +       KR PK++L 
Sbjct: 54  K-KLKNASNKIV-LSEAAPPLAEEESDKSGNAEAEVKPGNGSRSMKLV---KRLPKRILG 108

Query: 95  ILSNLPLAIGEMFTIAGLMALGTVIDQGEAP 3
            LSNLPLAIGEMFTIA LMALGTVIDQGEAP
Sbjct: 109 ALSNLPLAIGEMFTIAALMALGTVIDQGEAP 139


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