BLASTX nr result

ID: Panax21_contig00029701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029701
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272566.2| PREDICTED: uncharacterized protein LOC100244...   129   3e-28
emb|CBI40724.3| unnamed protein product [Vitis vinifera]              129   3e-28
emb|CAN74748.1| hypothetical protein VITISV_012026 [Vitis vinifera]   129   3e-28
ref|XP_002510686.1| bromodomain-containing protein [Ricinus comm...   117   1e-24
ref|XP_002307796.1| bromodomain protein [Populus trichocarpa] gi...   114   6e-24

>ref|XP_002272566.2| PREDICTED: uncharacterized protein LOC100244510 [Vitis vinifera]
          Length = 691

 Score =  129 bits (323), Expect = 3e-28
 Identities = 62/98 (63%), Positives = 76/98 (77%)
 Frame = +1

Query: 1   YNSSDTIYFRQARSIQDLAKRDFENLRHEGDDGELHPKVVRRGRPPSKHLKKPIGSTSVD 180
           YN+ DT+YFRQAR+IQ+LAKRDF NLR EGDDGE  PK+VRRGRPP+KHLKK +GS+ ++
Sbjct: 244 YNAPDTVYFRQARTIQELAKRDFANLRQEGDDGEPQPKIVRRGRPPTKHLKKSLGSSPLE 303

Query: 181 RIGPELSSSATLATGDRPARTGEDNTNGSNAYNLRRTP 294
            + PE SS ATLATG        DN+  SN+YNLR+ P
Sbjct: 304 HVAPETSSEATLATGG-------DNSISSNSYNLRKGP 334


>emb|CBI40724.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  129 bits (323), Expect = 3e-28
 Identities = 62/98 (63%), Positives = 76/98 (77%)
 Frame = +1

Query: 1   YNSSDTIYFRQARSIQDLAKRDFENLRHEGDDGELHPKVVRRGRPPSKHLKKPIGSTSVD 180
           YN+ DT+YFRQAR+IQ+LAKRDF NLR EGDDGE  PK+VRRGRPP+KHLKK +GS+ ++
Sbjct: 247 YNAPDTVYFRQARTIQELAKRDFANLRQEGDDGEPQPKIVRRGRPPTKHLKKSLGSSPLE 306

Query: 181 RIGPELSSSATLATGDRPARTGEDNTNGSNAYNLRRTP 294
            + PE SS ATLATG        DN+  SN+YNLR+ P
Sbjct: 307 HVAPETSSEATLATGG-------DNSISSNSYNLRKGP 337


>emb|CAN74748.1| hypothetical protein VITISV_012026 [Vitis vinifera]
          Length = 688

 Score =  129 bits (323), Expect = 3e-28
 Identities = 62/98 (63%), Positives = 76/98 (77%)
 Frame = +1

Query: 1   YNSSDTIYFRQARSIQDLAKRDFENLRHEGDDGELHPKVVRRGRPPSKHLKKPIGSTSVD 180
           YN+ DT+YFRQAR+IQ+LAKRDF NLR EGDDGE  PK+VRRGRPP+KHLKK +GS+ ++
Sbjct: 241 YNAPDTVYFRQARTIQELAKRDFANLRQEGDDGEPQPKIVRRGRPPTKHLKKSLGSSPLE 300

Query: 181 RIGPELSSSATLATGDRPARTGEDNTNGSNAYNLRRTP 294
            + PE SS ATLATG        DN+  SN+YNLR+ P
Sbjct: 301 HVAPETSSEATLATGG-------DNSISSNSYNLRKGP 331


>ref|XP_002510686.1| bromodomain-containing protein [Ricinus communis]
           gi|223551387|gb|EEF52873.1| bromodomain-containing
           protein [Ricinus communis]
          Length = 675

 Score =  117 bits (292), Expect = 1e-24
 Identities = 65/117 (55%), Positives = 80/117 (68%), Gaps = 1/117 (0%)
 Frame = +1

Query: 1   YNSSDTIYFRQARSIQDLAKRDFENLRHEGDDGELHPKVVRRGRPPSKHLKKPIGSTSVD 180
           YN SDTIY+RQARSIQ+LAK+DFENLR + DDGE  P V RRGRPP K LKK +  + +D
Sbjct: 209 YNPSDTIYYRQARSIQELAKKDFENLRQDSDDGEPQPNVARRGRPPGK-LKKSLERSPLD 267

Query: 181 RIGPELSSSATLATGDRPARTGEDNTNGSNAYNLRRTPPMLYRFQSPDAIL-TSHRS 348
           R+ P+ SS AT A G        DNTN +N YNLRRT    Y+++  D ++ TSH S
Sbjct: 268 RVSPDCSSDATHAFGG-------DNTNETNGYNLRRTNS--YKYRPADVLVRTSHGS 315


>ref|XP_002307796.1| bromodomain protein [Populus trichocarpa]
           gi|222857245|gb|EEE94792.1| bromodomain protein [Populus
           trichocarpa]
          Length = 617

 Score =  114 bits (286), Expect = 6e-24
 Identities = 63/118 (53%), Positives = 83/118 (70%), Gaps = 2/118 (1%)
 Frame = +1

Query: 1   YNSSDTIYFRQARSIQDLAKRDFENLRHEGDDGELHPKVVRRGRPP-SKHLKKPIGSTSV 177
           YNS+DTIY+RQAR++Q++AK+DFE+LR + DD E  PKVVRRGRPP +  LK  +  + V
Sbjct: 228 YNSADTIYYRQARAMQEIAKKDFEHLRQDSDDSEPQPKVVRRGRPPGTGKLKNALERSPV 287

Query: 178 DRIGPELSSSATLATGDRPARTGEDNTNGSNAYNLRRTPPMLYRFQSPDAIL-TSHRS 348
           DR+GPE SS ATLATG        DN + SN YNLRR+    Y++Q  D+++  SH S
Sbjct: 288 DRVGPEASSDATLATGG-------DNNSLSNGYNLRRSSS--YKYQPADSLVRASHGS 336


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