BLASTX nr result

ID: Panax21_contig00029691 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029691
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADL60215.1| beta-hydroxyacyl-ACP dehydratase [Helianthus annuus]   135   7e-30
ref|XP_002524166.1| hydroxyacyl-ACP Dehydrase [Ricinus communis]...   132   4e-29
gb|AFE88233.1| hydroxyacyl-ACP dehydrase [Nicotiana tabacum]          128   9e-28
gb|ADE06392.1| beta-hydroxyacyl-ACP dehydratase [Helianthus annuus]   125   8e-27
ref|XP_002304073.1| predicted protein [Populus trichocarpa] gi|1...   124   1e-26

>gb|ADL60215.1| beta-hydroxyacyl-ACP dehydratase [Helianthus annuus]
          Length = 227

 Score =  135 bits (339), Expect = 7e-30
 Identities = 80/128 (62%), Positives = 91/128 (71%), Gaps = 4/128 (3%)
 Frame = -2

Query: 391 MASSALSHSLVSPLNSHSPISRRSLHNLCLSLPQRQFGSISRSPLLSSTQSKMTQNNFIV 212
           M+S+  SHSL S + S     R    +LC   P      ISRSP+LS TQSK    +FI 
Sbjct: 1   MSSNTFSHSLFSQITSPISNHRPKPTSLCSFNPY-PLRPISRSPVLS-TQSK---TSFIT 55

Query: 211 NCTKEPTN----DEIPIELRYPAFPTVMDINQIREILPHRFPFLLVDRVIEYNPGVSAVA 44
           NC+   ++    DE PIELR+PAFPTV+DINQIREILPHRFPFLLVDRVIEYNPGVSAVA
Sbjct: 56  NCSSPASDNSSKDETPIELRFPAFPTVIDINQIREILPHRFPFLLVDRVIEYNPGVSAVA 115

Query: 43  IKNVTIND 20
           IKNVTIND
Sbjct: 116 IKNVTIND 123


>ref|XP_002524166.1| hydroxyacyl-ACP Dehydrase [Ricinus communis]
           gi|223536584|gb|EEF38229.1| hydroxyacyl-ACP Dehydrase
           [Ricinus communis]
          Length = 237

 Score =  132 bits (333), Expect = 4e-29
 Identities = 73/134 (54%), Positives = 90/134 (67%), Gaps = 10/134 (7%)
 Frame = -2

Query: 391 MASSALSHSLVSPLNSHSP--ISRRSLHNLCLSLPQRQFGSISRSPLLSSTQSKMTQNNF 218
           M S+A ++SL  P +S S   I+ R   N  L+LP+  F +    P+ +  + K    +F
Sbjct: 1   MGSTAFANSLFLPSSSSSSSSINSRPTSNNALALPRILFPNSRSPPICTHLKEKKNSTSF 60

Query: 217 IVNCT--------KEPTNDEIPIELRYPAFPTVMDINQIREILPHRFPFLLVDRVIEYNP 62
              C+        K+P  +E PIEL+YPA+PTVMDINQIREILPHRFPFLLVDRVIEYNP
Sbjct: 61  TAYCSLDASAAAAKDPKAEETPIELKYPAYPTVMDINQIREILPHRFPFLLVDRVIEYNP 120

Query: 61  GVSAVAIKNVTIND 20
           GVSAVAIKNVTIND
Sbjct: 121 GVSAVAIKNVTIND 134


>gb|AFE88233.1| hydroxyacyl-ACP dehydrase [Nicotiana tabacum]
          Length = 221

 Score =  128 bits (321), Expect = 9e-28
 Identities = 74/123 (60%), Positives = 81/123 (65%), Gaps = 3/123 (2%)
 Frame = -2

Query: 379 ALSHSLVSPLNSHSPISRRSLHNLCLSLPQRQFGS---ISRSPLLSSTQSKMTQNNFIVN 209
           A+S S+ S L S     +R   N  L  P         +SRS  LS+  +K    +FI N
Sbjct: 2   AVSQSIFSTLTS-----QRGFENASLPWPSSMLKHSLVVSRSNSLSTHFNKTRNTSFITN 56

Query: 208 CTKEPTNDEIPIELRYPAFPTVMDINQIREILPHRFPFLLVDRVIEYNPGVSAVAIKNVT 29
           C     ND  PIELRYPAFPTVMDINQIREILPHRFPFLLVDRVIEYNPGVS VAIKNVT
Sbjct: 57  CVSPEKNDT-PIELRYPAFPTVMDINQIREILPHRFPFLLVDRVIEYNPGVSVVAIKNVT 115

Query: 28  IND 20
           IND
Sbjct: 116 IND 118


>gb|ADE06392.1| beta-hydroxyacyl-ACP dehydratase [Helianthus annuus]
          Length = 221

 Score =  125 bits (313), Expect = 8e-27
 Identities = 69/124 (55%), Positives = 85/124 (68%)
 Frame = -2

Query: 391 MASSALSHSLVSPLNSHSPISRRSLHNLCLSLPQRQFGSISRSPLLSSTQSKMTQNNFIV 212
           MASS+L+HS++SP    SPIS ++        P      I +SP+ S+    +   N   
Sbjct: 1   MASSSLTHSIISP---QSPISNQTPQT-----PSINQLRIPKSPVFSTQLKTIFTPNCAS 52

Query: 211 NCTKEPTNDEIPIELRYPAFPTVMDINQIREILPHRFPFLLVDRVIEYNPGVSAVAIKNV 32
           +     + D+ PIEL+YPAFPTV+DINQIR+ILPHRFPFLLVDRVIEYNPGVSAV IKNV
Sbjct: 53  SAIDTISTDDTPIELKYPAFPTVVDINQIRDILPHRFPFLLVDRVIEYNPGVSAVGIKNV 112

Query: 31  TIND 20
           TIND
Sbjct: 113 TIND 116


>ref|XP_002304073.1| predicted protein [Populus trichocarpa] gi|118487238|gb|ABK95447.1|
           unknown [Populus trichocarpa]
           gi|222841505|gb|EEE79052.1| predicted protein [Populus
           trichocarpa]
          Length = 237

 Score =  124 bits (312), Expect = 1e-26
 Identities = 77/135 (57%), Positives = 93/135 (68%), Gaps = 11/135 (8%)
 Frame = -2

Query: 391 MASSALSHSLVSPLNSHSPISRRSLHNLCLSLPQRQFGSISRS--PLLSS---TQSKMTQ 227
           MA+SA ++SL+S   S +     S +N  L LP R   S  RS  PLLS+    + K   
Sbjct: 1   MATSAFANSLLSSSTSLAHGVLPSTNNNFL-LPSRVSVSNPRSQNPLLSAHFKLKDKTNS 59

Query: 226 NNFIVNCT------KEPTNDEIPIELRYPAFPTVMDINQIREILPHRFPFLLVDRVIEYN 65
           ++ I  C+       +P  ++IPIEL+YPA+PTVMDINQIREILPHRFPFLLVDRVIEYN
Sbjct: 60  SSLITFCSLGAAAANDPKEEQIPIELKYPAYPTVMDINQIREILPHRFPFLLVDRVIEYN 119

Query: 64  PGVSAVAIKNVTIND 20
           PGVSAVAIKNVTIND
Sbjct: 120 PGVSAVAIKNVTIND 134


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